Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_C02
         (668 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U49956-8|AAA93436.1|  765|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U49956-7|AAL32232.1|  753|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U49956-6|ABD94087.1|  762|Caenorhabditis elegans Hypothetical pr...    27   9.1  
U49956-5|ABD94086.1|  762|Caenorhabditis elegans Hypothetical pr...    27   9.1  

>U49956-8|AAA93436.1|  765|Caenorhabditis elegans Hypothetical
           protein M03A1.6a protein.
          Length = 765

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/71 (25%), Positives = 37/71 (52%)
 Frame = -1

Query: 239 FKMKTSKCIIGIITVSRELFLKISHYAFS*HLKTVYYSTFILLCY*YFNQFSFIILYHII 60
           F+ +  + ++  +  + +LF K ++  F+ H+    +S   ++CY    Q+S ++L+   
Sbjct: 378 FRTEIVRGVVSQLNRTYKLF-KANNPQFNGHVSVFGHSLGSVICYDVLTQYSPLMLFD-- 434

Query: 59  CKNYTKIIDHY 27
            K  TK ID Y
Sbjct: 435 -KYVTKSIDEY 444


>U49956-7|AAL32232.1|  753|Caenorhabditis elegans Hypothetical
           protein M03A1.6b protein.
          Length = 753

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/71 (25%), Positives = 37/71 (52%)
 Frame = -1

Query: 239 FKMKTSKCIIGIITVSRELFLKISHYAFS*HLKTVYYSTFILLCY*YFNQFSFIILYHII 60
           F+ +  + ++  +  + +LF K ++  F+ H+    +S   ++CY    Q+S ++L+   
Sbjct: 366 FRTEIVRGVVSQLNRTYKLF-KANNPQFNGHVSVFGHSLGSVICYDVLTQYSPLMLFD-- 422

Query: 59  CKNYTKIIDHY 27
            K  TK ID Y
Sbjct: 423 -KYVTKSIDEY 432


>U49956-6|ABD94087.1|  762|Caenorhabditis elegans Hypothetical
           protein M03A1.6d protein.
          Length = 762

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/71 (25%), Positives = 37/71 (52%)
 Frame = -1

Query: 239 FKMKTSKCIIGIITVSRELFLKISHYAFS*HLKTVYYSTFILLCY*YFNQFSFIILYHII 60
           F+ +  + ++  +  + +LF K ++  F+ H+    +S   ++CY    Q+S ++L+   
Sbjct: 375 FRTEIVRGVVSQLNRTYKLF-KANNPQFNGHVSVFGHSLGSVICYDVLTQYSPLMLFD-- 431

Query: 59  CKNYTKIIDHY 27
            K  TK ID Y
Sbjct: 432 -KYVTKSIDEY 441


>U49956-5|ABD94086.1|  762|Caenorhabditis elegans Hypothetical
           protein M03A1.6c protein.
          Length = 762

 Score = 27.5 bits (58), Expect = 9.1
 Identities = 18/71 (25%), Positives = 37/71 (52%)
 Frame = -1

Query: 239 FKMKTSKCIIGIITVSRELFLKISHYAFS*HLKTVYYSTFILLCY*YFNQFSFIILYHII 60
           F+ +  + ++  +  + +LF K ++  F+ H+    +S   ++CY    Q+S ++L+   
Sbjct: 375 FRTEIVRGVVSQLNRTYKLF-KANNPQFNGHVSVFGHSLGSVICYDVLTQYSPLMLFD-- 431

Query: 59  CKNYTKIIDHY 27
            K  TK ID Y
Sbjct: 432 -KYVTKSIDEY 441


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,123,608
Number of Sequences: 27780
Number of extensions: 283721
Number of successful extensions: 691
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 666
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 691
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)