Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B19
         (617 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    24   1.0  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    23   1.8  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    23   1.8  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    23   1.8  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    23   1.8  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    23   1.8  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    23   2.4  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    23   2.4  
AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex det...    23   2.4  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    23   3.2  
DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex det...    21   7.3  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   7.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   7.3  

>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 248 NYKFIGTSDYMFTNNSTSSHIKAKLIFQNH 337
           NYK+   ++Y   NN+  ++   KL ++N+
Sbjct: 321 NYKYSNYNNYNNYNNNNYNNYNKKLYYKNY 350



 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 219 YECKIYYSNIIINLSGLVI 275
           Y  K+YY N IIN+  + +
Sbjct: 341 YNKKLYYKNYIINIEQIPV 359


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 180 QPCHNLRYIVRL*YECKIYYSN 245
           Q C+N+ YI ++     +YY N
Sbjct: 101 QLCYNINYIEQIPVPVPVYYGN 122


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 180 QPCHNLRYIVRL*YECKIYYSN 245
           Q C+N+ YI ++     +YY N
Sbjct: 101 QLCYNINYIEQIPVPVPVYYGN 122


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 180 QPCHNLRYIVRL*YECKIYYSN 245
           Q C+N+ YI ++     +YY N
Sbjct: 101 QLCYNINYIEQIPVPVPVYYGN 122


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 180 QPCHNLRYIVRL*YECKIYYSN 245
           Q C+N+ YI ++     +YY N
Sbjct: 101 QLCYNINYIEQIPVPVPVYYGN 122


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 180 QPCHNLRYIVRL*YECKIYYSN 245
           Q C+N+ YI ++     +YY N
Sbjct: 101 QLCYNINYIEQIPVPVPVYYGN 122


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 219 YECKIYYSNIIINLSGLVI 275
           Y  K+YY N IIN+  + +
Sbjct: 100 YNKKLYYKNYIINIEQIPV 118


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 219 YECKIYYSNIIINLSGLVI 275
           Y  K+YY N IIN+  + +
Sbjct: 111 YNKKLYYKNYIINIEQIPV 129


>AY569697-1|AAS86650.1|  413|Apis mellifera complementary sex
           determiner protein.
          Length = 413

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 219 YECKIYYSNIIINLSGLVI 275
           Y  K+YY N IIN+  + +
Sbjct: 336 YNKKLYYKNYIINIEQIPV 354


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = -2

Query: 280 HIITSPDKFIIIFE 239
           H ITSP+KF+ +++
Sbjct: 101 HTITSPNKFVRLYQ 114


>DQ325126-1|ABD14140.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +3

Query: 180 QPCHNLRYIVRL*YECKIYYSN 245
           Q C+N+ +I ++     +YY N
Sbjct: 101 QLCYNINHIEQIPVPVPVYYGN 122


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 222 ECKIYYSNIIIN 257
           EC  YY NI++N
Sbjct: 322 ECYKYYGNIMVN 333


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 207 QCSADCGRADTYVCKIIAKSYYLHC 133
           Q  + CG+ D Y  + I  +Y + C
Sbjct: 522 QFDSFCGQLDVYKVETIGDAYCVAC 546


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 142,288
Number of Sequences: 438
Number of extensions: 2643
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18337950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)