Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B18
         (601 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA...    31   1.6  
BT003577-1|AAO39581.1|  858|Drosophila melanogaster LD28528p pro...    28   8.4  
AE014298-2213|AAS65346.1| 1016|Drosophila melanogaster CG8948-PF...    28   8.4  
AE014298-2212|AAS65345.1| 1016|Drosophila melanogaster CG8948-PE...    28   8.4  
AE014298-2211|AAS65344.1| 1016|Drosophila melanogaster CG8948-PD...    28   8.4  
AE014298-2210|AAS65343.1| 1016|Drosophila melanogaster CG8948-PC...    28   8.4  
AE014298-2209|AAS65342.1| 1016|Drosophila melanogaster CG8948-PB...    28   8.4  
AE014298-2208|AAF48506.3| 1016|Drosophila melanogaster CG8948-PA...    28   8.4  

>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
            protein.
          Length = 4498

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
 Frame = +1

Query: 439  PFFFIDLVGRRAYGPP--DGEWLPSPMDFSNARGRAK 543
            PFF   LV RR Y PP   G    +P+ FS +R  AK
Sbjct: 3494 PFFKRKLVARRPYTPPSASGGTTKAPLTFSTSRPTAK 3530


>BT003577-1|AAO39581.1|  858|Drosophila melanogaster LD28528p
           protein.
          Length = 858

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 311 TLFDCQRKPSL*NKMFF*LISLKSWLSVFFKYSSLSNLKHIY 186
           TLF CQR+ S   K F   ++ K    V + + +LS   H Y
Sbjct: 170 TLFSCQRRASEFEKRFCFDLTFKEKPGVVYTFQALSEKDHRY 211


>AE014298-2213|AAS65346.1| 1016|Drosophila melanogaster CG8948-PF,
           isoform F protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 311 TLFDCQRKPSL*NKMFF*LISLKSWLSVFFKYSSLSNLKHIY 186
           TLF CQR+ S   K F   ++ K    V + + +LS   H Y
Sbjct: 328 TLFSCQRRASEFEKRFCFDLTFKEKPGVVYTFQALSEKDHRY 369


>AE014298-2212|AAS65345.1| 1016|Drosophila melanogaster CG8948-PE,
           isoform E protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 311 TLFDCQRKPSL*NKMFF*LISLKSWLSVFFKYSSLSNLKHIY 186
           TLF CQR+ S   K F   ++ K    V + + +LS   H Y
Sbjct: 328 TLFSCQRRASEFEKRFCFDLTFKEKPGVVYTFQALSEKDHRY 369


>AE014298-2211|AAS65344.1| 1016|Drosophila melanogaster CG8948-PD,
           isoform D protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 311 TLFDCQRKPSL*NKMFF*LISLKSWLSVFFKYSSLSNLKHIY 186
           TLF CQR+ S   K F   ++ K    V + + +LS   H Y
Sbjct: 328 TLFSCQRRASEFEKRFCFDLTFKEKPGVVYTFQALSEKDHRY 369


>AE014298-2210|AAS65343.1| 1016|Drosophila melanogaster CG8948-PC,
           isoform C protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 311 TLFDCQRKPSL*NKMFF*LISLKSWLSVFFKYSSLSNLKHIY 186
           TLF CQR+ S   K F   ++ K    V + + +LS   H Y
Sbjct: 328 TLFSCQRRASEFEKRFCFDLTFKEKPGVVYTFQALSEKDHRY 369


>AE014298-2209|AAS65342.1| 1016|Drosophila melanogaster CG8948-PB,
           isoform B protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 311 TLFDCQRKPSL*NKMFF*LISLKSWLSVFFKYSSLSNLKHIY 186
           TLF CQR+ S   K F   ++ K    V + + +LS   H Y
Sbjct: 328 TLFSCQRRASEFEKRFCFDLTFKEKPGVVYTFQALSEKDHRY 369


>AE014298-2208|AAF48506.3| 1016|Drosophila melanogaster CG8948-PA,
           isoform A protein.
          Length = 1016

 Score = 28.3 bits (60), Expect = 8.4
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -3

Query: 311 TLFDCQRKPSL*NKMFF*LISLKSWLSVFFKYSSLSNLKHIY 186
           TLF CQR+ S   K F   ++ K    V + + +LS   H Y
Sbjct: 328 TLFSCQRRASEFEKRFCFDLTFKEKPGVVYTFQALSEKDHRY 369


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,826,483
Number of Sequences: 53049
Number of extensions: 343491
Number of successful extensions: 1284
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1284
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)