Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B17
         (579 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83217-2|CAB05680.2|  319|Caenorhabditis elegans Hypothetical pr...    28   5.5  
Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical pr...    27   9.6  
Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical pr...    27   9.6  
AL110482-8|CAE17990.1|  193|Caenorhabditis elegans Hypothetical ...    27   9.6  

>Z83217-2|CAB05680.2|  319|Caenorhabditis elegans Hypothetical
           protein C10C6.3 protein.
          Length = 319

 Score = 27.9 bits (59), Expect = 5.5
 Identities = 15/39 (38%), Positives = 24/39 (61%)
 Frame = -2

Query: 167 PIPPRSLLWSPTPATVSAMLTDSPTDSLTDGNL*YKPLT 51
           P P ++ L +PT  T ++ LT  P+++LT GN   K +T
Sbjct: 270 PTPQKAKLTTPTSTTPASSLT--PSNALTPGNEDKKKMT 306


>Z92826-4|CAB07322.1|  309|Caenorhabditis elegans Hypothetical
           protein C18D11.4 protein.
          Length = 309

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
 Frame = +1

Query: 130 GVGDQRSDLGGMGLGQRLGDHRLAGGEGGSVR---GMTEHWSTISYWGCXXXXXXXXXXD 300
           G GD+ +D G  G  +  GD R  GG GG  R   G  + +    Y G            
Sbjct: 183 GGGDRFNDRGSRGGDRYGGDRRGGGGGGGGDRYGGGGGDRYGGDRYGGGGGRRGSPDRRG 242

Query: 301 AIGSVGDHGGGYV 339
              S G  GGGY+
Sbjct: 243 GFRS-GGGGGGYM 254


>Z70783-9|CAA94857.2|  455|Caenorhabditis elegans Hypothetical
           protein ZK856.9 protein.
          Length = 455

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 15/29 (51%), Positives = 16/29 (55%)
 Frame = +1

Query: 130 GVGDQRSDLGGMGLGQRLGDHRLAGGEGG 216
           GVG+QR   GG G G R G HR     GG
Sbjct: 361 GVGNQRFGGGGRGRGGR-GFHRGGANRGG 388


>AL110482-8|CAE17990.1|  193|Caenorhabditis elegans Hypothetical
           protein Y39G8B.10 protein.
          Length = 193

 Score = 27.1 bits (57), Expect = 9.6
 Identities = 14/26 (53%), Positives = 17/26 (65%)
 Frame = +1

Query: 151 DLGGMGLGQRLGDHRLAGGEGGSVRG 228
           DLGG+G  + L D R  GG GG +RG
Sbjct: 108 DLGGLGKRRGLEDLRALGGLGG-IRG 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,426,479
Number of Sequences: 27780
Number of extensions: 80601
Number of successful extensions: 241
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1205362812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)