Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B14
         (743 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI000069F97C Cluster: Ectonucleotide pyrophosphatase/p...    34   3.2  
UniRef50_Q5M2A5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.6  
UniRef50_P58145 Cluster: Ribosomal operon-associated A protein; ...    33   9.8  

>UniRef50_UPI000069F97C Cluster: Ectonucleotide
           pyrophosphatase/phosphodiesterase family member 3 (E-
           NPP 3) (Phosphodiesterase I/nucleotide pyrophosphatase
           3) (Phosphodiesterase I beta) (PD-Ibeta) (CD203c
           antigen) [Includes: Alkaline phosphodiesterase I (EC
           3.1.4.1); Nucleotide pyrophos; n=1; Xenopus
           tropicalis|Rep: Ectonucleotide
           pyrophosphatase/phosphodiesterase family member 3 (E-
           NPP 3) (Phosphodiesterase I/nucleotide pyrophosphatase
           3) (Phosphodiesterase I beta) (PD-Ibeta) (CD203c
           antigen) [Includes: Alkaline phosphodiesterase I (EC
           3.1.4.1); Nucleotide pyrophos - Xenopus tropicalis
          Length = 364

 Score = 34.3 bits (75), Expect = 3.2
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
 Frame = -1

Query: 455 KLCVKNSKY--SIYFTMGFCDRYNLVLSFRTEANDIVDFNFLKTFLKYYSSLVFDKK*N 285
           K C  +SKY  SIY T  F + Y +V     E+N I+D N     +  + SL  ++K N
Sbjct: 38  KTCGTHSKYMRSIYPTKTFPNHYTIVTGLYPESNGIIDNNMYDVHMNKHFSLSGNEKFN 96


>UniRef50_Q5M2A5 Cluster: Putative uncharacterized protein; n=1;
           Streptococcus thermophilus LMG 18311|Rep: Putative
           uncharacterized protein - Streptococcus thermophilus
           (strain ATCC BAA-250 / LMG 18311)
          Length = 401

 Score = 33.5 bits (73), Expect = 5.6
 Identities = 18/49 (36%), Positives = 27/49 (55%)
 Frame = -1

Query: 440 NSKYSIYFTMGFCDRYNLVLSFRTEANDIVDFNFLKTFLKYYSSLVFDK 294
           N K+SI    GF +  +  L  + EAN +V+FNF     KY + L+ D+
Sbjct: 167 NHKFSIDIIKGFEEEISS-LQKKIEANVLVEFNFEDNLTKYETKLIIDQ 214


>UniRef50_P58145 Cluster: Ribosomal operon-associated A protein;
           n=1; Euglena longa|Rep: Ribosomal operon-associated A
           protein - Astasia longa (Euglenophycean alga)
          Length = 519

 Score = 32.7 bits (71), Expect = 9.8
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -1

Query: 464 LNFK-LCVKNSKYSIYFTMGFCDRYNLVLSFRTEANDIVDFNFLKTFLK 321
           LNFK + +KN     YFT+ F +++N +       N   + NFLK FLK
Sbjct: 159 LNFKKILLKNFMKLYYFTINFNNKFNYMNKKWLYKNLTFNINFLKYFLK 207


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,565,959
Number of Sequences: 1657284
Number of extensions: 10105596
Number of successful extensions: 18846
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 18243
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18839
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 60911752460
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)