Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B13
         (691 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC2H8.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||...    26   4.5  
SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr 1|...    26   4.5  
SPMIT.02 |||mitochondrial DNA binding endonuclease|Schizosacchar...    26   5.9  
SPAC1786.01c ||SPAC31G5.20c|triacylglycerol lipase|Schizosacchar...    26   5.9  
SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase |Schizosa...    25   7.8  

>SPCC2H8.04 |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 266

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 12/47 (25%), Positives = 25/47 (53%)
 Frame = +2

Query: 8   AYIKSRRLHRFSQVIQFIQIIASXLNLSQSFNLQTTSWHIISQIXTL 148
           AYI    +    ++ + IQ++ S  +L   +  ++ +WHI+SQ   +
Sbjct: 196 AYISEEDVGYADEIHKCIQMVLS--DLDSIYKRESKNWHIVSQFYNM 240


>SPAC3H1.02c |||metallopeptidase|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 1036

 Score = 26.2 bits (55), Expect = 4.5
 Identities = 14/46 (30%), Positives = 25/46 (54%)
 Frame = +1

Query: 445 YFSTLTQLLSRVMVIIFLIHFK*IYWV*YTL*YNVFDRQRLYVLSN 582
           Y+ T  +LLS  + +    + K +YW+   L   V+DR+R+  + N
Sbjct: 634 YYETKRELLSIEIKVTRENYEKGVYWIRNLLAKTVWDRERMLSVIN 679


>SPMIT.02 |||mitochondrial DNA binding
           endonuclease|Schizosaccharomyces pombe|chr
           mitochondrial|||Manual
          Length = 384

 Score = 25.8 bits (54), Expect = 5.9
 Identities = 11/38 (28%), Positives = 20/38 (52%)
 Frame = -1

Query: 643 VTQRYTRAPILIPVKEYIYLSSIIRTVSGDRKHCITKY 530
           +TQ Y + P+L  + E+++ S I   +   +   IT Y
Sbjct: 279 ITQNYEQ-PLLAQISEFLFNSQISPKIKSKKNSLITNY 315


>SPAC1786.01c ||SPAC31G5.20c|triacylglycerol
           lipase|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 630

 Score = 25.8 bits (54), Expect = 5.9
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -3

Query: 596 VYLLKFDNTYSLWRSKTLYYKVYY 525
           V+L KFD T ++W  KT +   YY
Sbjct: 523 VFLQKFDGTITIW-PKTKFQDFYY 545


>SPBC2G2.02 |syj1||inositol-polyphosphate 5-phosphatase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 1076

 Score = 25.4 bits (53), Expect = 7.8
 Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 3/63 (4%)
 Frame = -2

Query: 525 HPIDLLKMY*KYYNHDTRK---*LC*RRKVMKFTSKYNII*CDGFIDNMNNVFYNYTQLL 355
           HP+ L     +Y NH+ RK        + V  F + YN+  C       N +F   T L 
Sbjct: 529 HPVILYDPIHEYVNHELRKRENEFSEHKNVKIFVASYNLNGCSATTKLENWLFPENTPLA 588

Query: 354 SIF 346
            I+
Sbjct: 589 DIY 591


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,509,593
Number of Sequences: 5004
Number of extensions: 48575
Number of successful extensions: 91
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 91
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 319939482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)