Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B13
         (691 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z95559-14|CAJ76976.1|  338|Caenorhabditis elegans Hypothetical p...    95   6e-20
Z95559-12|CAJ43917.1|  396|Caenorhabditis elegans Hypothetical p...    95   6e-20
Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical p...    95   6e-20
AF077545-3|AAC26304.1|  396|Caenorhabditis elegans Hypothetical ...    31   1.0  
Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z92970-3|CAB07482.1|  383|Caenorhabditis elegans Hypothetical pr...    29   4.1  
AL021487-12|CAA16358.2|  324|Caenorhabditis elegans Hypothetical...    27   9.6  

>Z95559-14|CAJ76976.1|  338|Caenorhabditis elegans Hypothetical
           protein Y41E3.7c protein.
          Length = 338

 Score = 94.7 bits (225), Expect = 6e-20
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -3

Query: 656 FRRDCHTEVYAGSHTYPGEGVYLLKFDNTYSLWRSKTLYYKVYYTQ 519
           +RRDCH EVYAGSH YPG G+YLLKFDN+YSLWRSKTLYY+VYY++
Sbjct: 293 YRRDCHEEVYAGSHRYPGRGIYLLKFDNSYSLWRSKTLYYRVYYSK 338


>Z95559-12|CAJ43917.1|  396|Caenorhabditis elegans Hypothetical
           protein Y41E3.7b protein.
          Length = 396

 Score = 94.7 bits (225), Expect = 6e-20
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -3

Query: 656 FRRDCHTEVYAGSHTYPGEGVYLLKFDNTYSLWRSKTLYYKVYYTQ 519
           +RRDCH EVYAGSH YPG G+YLLKFDN+YSLWRSKTLYY+VYY++
Sbjct: 351 YRRDCHEEVYAGSHRYPGRGIYLLKFDNSYSLWRSKTLYYRVYYSK 396


>Z95559-11|CAB09005.2|  435|Caenorhabditis elegans Hypothetical
           protein Y41E3.7a protein.
          Length = 435

 Score = 94.7 bits (225), Expect = 6e-20
 Identities = 37/46 (80%), Positives = 43/46 (93%)
 Frame = -3

Query: 656 FRRDCHTEVYAGSHTYPGEGVYLLKFDNTYSLWRSKTLYYKVYYTQ 519
           +RRDCH EVYAGSH YPG G+YLLKFDN+YSLWRSKTLYY+VYY++
Sbjct: 390 YRRDCHEEVYAGSHRYPGRGIYLLKFDNSYSLWRSKTLYYRVYYSK 435


>AF077545-3|AAC26304.1|  396|Caenorhabditis elegans Hypothetical
           protein H41C03.1 protein.
          Length = 396

 Score = 30.7 bits (66), Expect = 1.0
 Identities = 13/28 (46%), Positives = 19/28 (67%)
 Frame = -3

Query: 608 PGEGVYLLKFDNTYSLWRSKTLYYKVYY 525
           PG GVY +K+ N  +  RS TLY++V +
Sbjct: 356 PGAGVYKIKWGNEQAWIRSLTLYHRVRF 383


>Z66524-6|CAA91418.2|  408|Caenorhabditis elegans Hypothetical
           protein T13H5.2 protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -3

Query: 599 GVYLLKFDNTYSLWRSKTLYY 537
           GVY   FDNT+S  RSKT+ Y
Sbjct: 381 GVYKFVFDNTHSKLRSKTVKY 401


>Z92970-3|CAB07482.1|  383|Caenorhabditis elegans Hypothetical
           protein H06O01.3 protein.
          Length = 383

 Score = 28.7 bits (61), Expect = 4.1
 Identities = 14/41 (34%), Positives = 20/41 (48%)
 Frame = -3

Query: 653 RRDCHTEVYAGSHTYPGEGVYLLKFDNTYSLWRSKTLYYKV 531
           R +C      G       G Y+L+FDN YS + +K L Y +
Sbjct: 338 RLECTNVPITGHLDVTDVGNYVLEFDNYYSWFSAKQLRYNI 378


>AL021487-12|CAA16358.2|  324|Caenorhabditis elegans Hypothetical
           protein Y45F10B.6 protein.
          Length = 324

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 13/47 (27%), Positives = 22/47 (46%)
 Frame = +2

Query: 41  SQVIQFIQIIASXLNLSQSFNLQTTSWHIISQIXTLFXYIAFINVYF 181
           SQ+   + +I+  L +   F    TSW  I Q       + F+++YF
Sbjct: 74  SQLTSILYMISDYLTIRIPFTGAITSWCAIQQPNHFLKILFFLSIYF 120


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,604,670
Number of Sequences: 27780
Number of extensions: 260934
Number of successful extensions: 526
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 522
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)