Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B11
         (767 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_1052 - 22567937-22568329,22568436-22568669,22568787-225691...    30   2.3  
09_02_0405 - 8597807-8598045,8599218-8599284,8599571-8599636,859...    29   3.1  
03_05_0155 - 21307001-21307239,21308217-21308320,21308564-213087...    29   4.1  
06_01_0624 + 4542344-4543447                                           28   9.4  
05_04_0203 + 19016547-19016860,19017020-19017169,19017946-190180...    28   9.4  
01_07_0030 + 40601063-40601182,40601684-40602116,40602217-406023...    28   9.4  

>10_08_1052 -
           22567937-22568329,22568436-22568669,22568787-22569111,
           22569239-22569484,22569576-22569916,22570070-22570150,
           22570275-22570394,22570549-22570650,22570900-22571035,
           22571210-22571362,22572605-22572906
          Length = 810

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = +2

Query: 668 WLPEPKDVYNANAAAACFEIYIXRYI 745
           W PEP+DVY  N A   F + I +++
Sbjct: 346 WAPEPRDVYWQNLAIPFFSLSIRKFL 371


>09_02_0405 -
           8597807-8598045,8599218-8599284,8599571-8599636,
           8599731-8599795,8600514-8600872,8601118-8601125,
           8601567-8601656,8601770-8601962,8603518-8603608,
           8603948-8604080,8605340-8605480,8605601-8605662,
           8605743-8605830,8606107-8606536,8606651-8606757
          Length = 712

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 511 YAKNLNSFVFCKSICAVHNLVNYSMYTI 594
           Y+K+LN   + K I  + NL+N  +YT+
Sbjct: 206 YSKDLNQHNYSKQISEIENLMNSKVYTV 233


>03_05_0155 -
           21307001-21307239,21308217-21308320,21308564-21308772,
           21308773-21308838,21308933-21308997,21309716-21309942,
           21310156-21310269,21310515-21310522,21310964-21311053,
           21311167-21311359,21312934-21313024,21313364-21313496,
           21314756-21314896,21315017-21315078,21315159-21315246,
           21315523-21315952,21316067-21316173
          Length = 788

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = +1

Query: 511 YAKNLNSFVFCKSICAVHNLVNYSMYTI 594
           Y+K+LN   + K I  + NL+N  +YT+
Sbjct: 206 YSKDLNPHNYSKQISEIENLMNSKVYTV 233


>06_01_0624 + 4542344-4543447
          Length = 367

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +3

Query: 618 KKLDYVFFELTACLILSGYLSPKTSTTQMPPPP 716
           ++ DY+F  L   +  S YLS       +PPPP
Sbjct: 150 QEADYLFEALVYRMFCSSYLSKSWDCQLLPPPP 182


>05_04_0203 +
           19016547-19016860,19017020-19017169,19017946-19018081,
           19018222-19018323,19018556-19018675,19018800-19018880,
           19019041-19019381,19020296-19020589,19020701-19021025,
           19021167-19021400,19021506-19021760
          Length = 783

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +2

Query: 665 KWLPEPKDVYNANAAAACFEIYIXRYI 745
           +W PEP+DV+  N A    E+ + R I
Sbjct: 348 EWAPEPRDVFWPNLAIPFVELSVRRLI 374


>01_07_0030 +
           40601063-40601182,40601684-40602116,40602217-40602326,
           40602506-40602550
          Length = 235

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = +3

Query: 222 EKLVTSKVWTFTEPKGEYR 278
           E L   K W+ TEP+GEY+
Sbjct: 131 EHLAAQKKWSSTEPEGEYK 149


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,729,411
Number of Sequences: 37544
Number of extensions: 325981
Number of successful extensions: 817
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 793
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 814
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2063219900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)