Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B08
         (648 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X79243-1|CAA55830.1| 1213|Drosophila melanogaster dTAF II 150 pr...    29   4.1  
AY070564-1|AAL48035.1| 1221|Drosophila melanogaster LD43729p pro...    29   4.1  
AE014296-1772|AAF50190.2| 1221|Drosophila melanogaster CG6711-PA...    29   4.1  

>X79243-1|CAA55830.1| 1213|Drosophila melanogaster dTAF II 150
           protein.
          Length = 1213

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 8   QFTHFCLSIQLPLFFNSXT-LHKSSSGHQSQNAKKFPFS 121
           + THFCL   LPL  N+   LH++   ++   + ++PFS
Sbjct: 256 EVTHFCLPGLLPLLKNTVRYLHEAFEFYEETLSTRYPFS 294


>AY070564-1|AAL48035.1| 1221|Drosophila melanogaster LD43729p
           protein.
          Length = 1221

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 8   QFTHFCLSIQLPLFFNSXT-LHKSSSGHQSQNAKKFPFS 121
           + THFCL   LPL  N+   LH++   ++   + ++PFS
Sbjct: 256 EVTHFCLPGLLPLLKNTVRYLHEAFEFYEETLSTRYPFS 294


>AE014296-1772|AAF50190.2| 1221|Drosophila melanogaster CG6711-PA
           protein.
          Length = 1221

 Score = 29.5 bits (63), Expect = 4.1
 Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = +2

Query: 8   QFTHFCLSIQLPLFFNSXT-LHKSSSGHQSQNAKKFPFS 121
           + THFCL   LPL  N+   LH++   ++   + ++PFS
Sbjct: 256 EVTHFCLPGLLPLLKNTVRYLHEAFEFYEETLSTRYPFS 294


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,067,397
Number of Sequences: 53049
Number of extensions: 321748
Number of successful extensions: 706
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 690
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 706
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2744900550
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)