Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B06
         (528 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0650 - 26423829-26424179,26424379-26424612,26424961-264252...    29   1.7  
07_01_1124 + 10392909-10392974,10393037-10393455,10393503-103936...    27   9.3  

>03_05_0650 -
           26423829-26424179,26424379-26424612,26424961-26425236,
           26425372-26425648,26425751-26425764,26425843-26425989,
           26426306-26426366,26426570-26426604,26426688-26426882,
           26428230-26428439,26428865-26428940,26429519-26429799
          Length = 718

 Score = 29.5 bits (63), Expect = 1.7
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 23  TTETIQKHFHLSSYLSHRSFYKI 91
           T E+    +H+SSYLSH+  YK+
Sbjct: 160 TVESFFTKYHVSSYLSHQIIYKV 182


>07_01_1124 +
           10392909-10392974,10393037-10393455,10393503-10393657,
           10393792-10394247,10394379-10395298
          Length = 671

 Score = 27.1 bits (57), Expect = 9.3
 Identities = 13/33 (39%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
 Frame = +2

Query: 5   CIYXQSTTE-TIQKHFHLSSYLSHRSFYKITHP 100
           CI+    TE T  KH     Y+ HR F    HP
Sbjct: 283 CIHCMDETESTYLKHCRKVVYMCHRRFLAANHP 315


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,415,553
Number of Sequences: 37544
Number of extensions: 153552
Number of successful extensions: 260
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 260
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1166441080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)