Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B06
         (528 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    25   1.2  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    25   1.2  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    25   1.2  
AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax home...    24   3.6  
AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax home...    24   3.6  
AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding pr...    23   4.8  
AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative odorant-b...    23   4.8  
AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription fact...    23   6.3  
AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione transf...    23   8.4  
AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox transcrip...    23   8.4  

>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 11  YXQSTTETIQKHFHLSSYLSHRSFYKITH 97
           Y +  T  ++K FH + YL+ R   +I H
Sbjct: 145 YTRFQTLELEKEFHFNHYLTRRRRIEIAH 173


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 11  YXQSTTETIQKHFHLSSYLSHRSFYKITH 97
           Y +  T  ++K FH + YL+ R   +I H
Sbjct: 251 YTRYQTLELEKEFHFNRYLTRRRRIEIAH 279


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 25.4 bits (53), Expect = 1.2
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 11  YXQSTTETIQKHFHLSSYLSHRSFYKITH 97
           Y +  T  ++K FH + YL+ R   +I H
Sbjct: 287 YTRYQTLELEKEFHFNRYLTRRRRIEIAH 315


>AF080563-1|AAC31943.1|  310|Anopheles gambiae Ultrabithorax
           homeotic protein IVa protein.
          Length = 310

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 11  YXQSTTETIQKHFHLSSYLSHRSFYKITH 97
           Y +  T  ++K FH + YL+ R   ++ H
Sbjct: 226 YTRYQTLELEKEFHTNHYLTRRRRIEMAH 254


>AF080562-1|AAC31942.1|  327|Anopheles gambiae Ultrabithorax
           homeotic protein IIa protein.
          Length = 327

 Score = 23.8 bits (49), Expect = 3.6
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +2

Query: 11  YXQSTTETIQKHFHLSSYLSHRSFYKITH 97
           Y +  T  ++K FH + YL+ R   ++ H
Sbjct: 243 YTRYQTLELEKEFHTNHYLTRRRRIEMAH 271


>AY330178-1|AAQ16284.1|  176|Anopheles gambiae odorant-binding
           protein AgamOBP51 protein.
          Length = 176

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -1

Query: 264 LYTFVF*KCLLLDNLHLCPCGFKKASVLC 178
           ++   F  C++++++  CP     +SVLC
Sbjct: 136 MFALKFQGCIMVESMRNCPAERWDSSVLC 164


>AJ618921-1|CAF02000.1|  172|Anopheles gambiae putative
           odorant-binding protein OBP5479 protein.
          Length = 172

 Score = 23.4 bits (48), Expect = 4.8
 Identities = 8/29 (27%), Positives = 17/29 (58%)
 Frame = -1

Query: 264 LYTFVF*KCLLLDNLHLCPCGFKKASVLC 178
           ++   F  C++++++  CP     +SVLC
Sbjct: 138 MFALKFQGCIMVESMRNCPAERWDSSVLC 166


>AF269155-1|AAF91400.1|   59|Anopheles gambiae transcription
          factor Deformed protein.
          Length = 59

 Score = 23.0 bits (47), Expect = 6.3
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +2

Query: 35 IQKHFHLSSYLSHRSFYKITH 97
          ++K FH + YL+ R   +I H
Sbjct: 16 LEKEFHYNXYLTRRRRIEIAH 36


>AY255856-1|AAP13482.1|  248|Anopheles gambiae glutathione
           transferase o1 protein.
          Length = 248

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 6/15 (40%), Positives = 13/15 (86%)
 Frame = -2

Query: 212 VLVDLKRHPYYAVYV 168
           +++D K+ PY+A+Y+
Sbjct: 38  LMLDAKKIPYHAIYI 52


>AF230521-1|AAF36974.2|  185|Anopheles gambiae homeobox
          transcription factor protein.
          Length = 185

 Score = 22.6 bits (46), Expect = 8.4
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +2

Query: 11 YXQSTTETIQKHFHLSSYLSHR 76
          Y +  T  ++K FH + YL+ R
Sbjct: 13 YSRHQTIELEKEFHFNRYLNRR 34


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 454,558
Number of Sequences: 2352
Number of extensions: 6774
Number of successful extensions: 54
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 54
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48628785
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)