Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B06
         (528 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee homeobox-...    25   0.36 
M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee homeobox-...    25   0.48 
M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee homeobox-...    25   0.48 
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    25   0.48 
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    23   2.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   2.6  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   2.6  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   3.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   5.9  

>M29488-1|AAA27723.1|   86|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H55. ).
          Length = 86

 Score = 25.4 bits (53), Expect = 0.36
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 11  YXQSTTETIQKHFHLSSYLSHRSFYKITH 97
           Y +  T  ++K FH + YL+ R   +I H
Sbjct: 15  YTRYQTLELEKEFHFNRYLTRRRRIEIAH 43


>M29494-1|AAA27729.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H15. ).
          Length = 74

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 11  YXQSTTETIQKHFHLSSYLSHRSFYKITH 97
           Y +  T  ++K FH + YL+ R   +I H
Sbjct: 15  YTRFQTLELEKEFHYNHYLTRRRRIEIAH 43


>M29493-1|AAA27728.1|   74|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone H90. ).
          Length = 74

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 11  YXQSTTETIQKHFHLSSYLSHRSFYKITH 97
           Y +  T  ++K FH + YL+ R   +I H
Sbjct: 15  YTRYQTLELEKEFHYNRYLTRRRRIEIAH 43


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 25.0 bits (52), Expect = 0.48
 Identities = 10/29 (34%), Positives = 16/29 (55%)
 Frame = +2

Query: 11  YXQSTTETIQKHFHLSSYLSHRSFYKITH 97
           Y +  T  ++K FH + YL+ R   +I H
Sbjct: 277 YTRYQTLELEKEFHYNRYLTRRRRIEIAH 305


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 370 QRKVIIFNTGLMAQLHRMHFPLTNTGRETGKK 465
           + KV    +GL  +L    +PLT   +ET +K
Sbjct: 132 EEKVSSTLSGLEGELKGTFYPLTGMSKETQQK 163


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 424 HFPLTNTGRETGKKDST 474
           HFP T TGRE    + T
Sbjct: 200 HFPATPTGREVALIEQT 216


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +1

Query: 370 QRKVIIFNTGLMAQLHRMHFPLTNTGRETGKK 465
           + KV    +GL  +L    +PLT   +ET +K
Sbjct: 148 EEKVSSTLSGLEGELKGTFYPLTGMSKETQQK 179


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +2

Query: 29  ETIQKHFHLSSYLSH 73
           ET+Q+H HL ++  H
Sbjct: 136 ETLQRHHHLQNHHHH 150


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 8/17 (47%), Positives = 9/17 (52%)
 Frame = +2

Query: 200 NPQGHKCKLSNNKHFQN 250
           N Q H    SNN+H  N
Sbjct: 447 NDQAHHSSKSNNRHNNN 463


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 121,431
Number of Sequences: 438
Number of extensions: 2189
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)