Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_B02
         (719 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1297 + 29110432-29110542,29110613-29110804,29110893-291109...    29   3.7  
02_01_0326 - 2230617-2230735,2231430-2231493,2231646-2231849,223...    28   6.5  
12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,709...    28   8.6  
04_03_0784 - 19610370-19611548,19611830-19611919,19612001-196120...    28   8.6  

>06_03_1297 +
           29110432-29110542,29110613-29110804,29110893-29110976,
           29111115-29111191,29111410-29111476,29111640-29111697,
           29111823-29111890,29111981-29112043,29112549-29112651,
           29112685-29112845,29112934-29113053,29113300-29113356,
           29113646-29113809,29113896-29114055,29114720-29114803,
           29115074-29115196,29115368-29115498,29115577-29115658,
           29115876-29115963,29116143-29116186,29116264-29116387,
           29116450-29116537,29116649-29116849,29116894-29117104,
           29117383-29117454,29117587-29117790,29117959-29118087
          Length = 1021

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = +2

Query: 623 IDNYQTNTVNQSYILFKNNHHLFVVWMTASDF 718
           I N+  + +   YI+   +HH  +VW  A D+
Sbjct: 151 IGNFSWDYIYAEYIVASGDHHRSIVWQIAEDY 182


>02_01_0326 -
           2230617-2230735,2231430-2231493,2231646-2231849,
           2231945-2232016,2232293-2232458,2232543-2232758,
           2232873-2232949,2233056-2233151,2233237-2233280,
           2233435-2233522,2233805-2233886,2233961-2234091,
           2234264-2234350,2234804-2234887,2234985-2235144,
           2235251-2235414,2235757-2235762,2235823-2235879,
           2236159-2236278,2236387-2236496,2236587-2236689,
           2236789-2236842,2237106-2237168,2237258-2237325,
           2237412-2237469,2237684-2237750,2238233-2238309,
           2238433-2238516,2238652-2238828,2239010-2239144
          Length = 1010

 Score = 28.3 bits (60), Expect = 6.5
 Identities = 8/32 (25%), Positives = 17/32 (53%)
 Frame = +2

Query: 623 IDNYQTNTVNQSYILFKNNHHLFVVWMTASDF 718
           + N+  + +   Y++   +HH  +VW  A D+
Sbjct: 154 VTNFSWDFIYAEYVVVAGHHHRSIVWQIAEDY 185


>12_01_0777 - 7095081-7096259,7096636-7096725,7096827-7096902,
            7097150-7097367,7097502-7097717,7097922-7098107,
            7098181-7098303,7098399-7098514,7099254-7099832,
            7101485-7101517,7102485-7103679,7103732-7103797,
            7104843-7104905,7105328-7105411
          Length = 1407

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 11/33 (33%), Positives = 20/33 (60%)
 Frame = +2

Query: 563  TIQVGRGIKYKWR*SHKLKYIDNYQTNTVNQSY 661
            TI++ RG++ ++   HKL+Y D+   +    SY
Sbjct: 924  TIEILRGLRERYEIHHKLRYTDDALISAAKLSY 956


>04_03_0784 -
           19610370-19611548,19611830-19611919,19612001-19612076,
           19612917-19613134,19613333-19613548,19613974-19614159,
           19614242-19614364,19614456-19614571,19615126-19615588
          Length = 888

 Score = 27.9 bits (59), Expect = 8.6
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +2

Query: 563 TIQVGRGIKYKWR*SHKLKYIDNYQTNTVNQSY 661
           TIQ+ RG++ ++   HKL+Y D+        SY
Sbjct: 405 TIQILRGLRERYELHHKLRYTDDSLIAAAQLSY 437


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,580,928
Number of Sequences: 37544
Number of extensions: 231119
Number of successful extensions: 358
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 358
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1874582652
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)