Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_A21
         (417 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81468-4|CAB03877.1|  394|Caenorhabditis elegans Hypothetical pr...    27   7.2  
U13876-12|AAA21169.1|  363|Caenorhabditis elegans Hypothetical p...    27   7.2  
AL021181-1|CAA15983.1|  394|Caenorhabditis elegans Hypothetical ...    27   7.2  
Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical pr...    26   9.5  
Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical pr...    26   9.5  
Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical pr...    26   9.5  
AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical ...    26   9.5  

>Z81468-4|CAB03877.1|  394|Caenorhabditis elegans Hypothetical
           protein Y54G11B.1 protein.
          Length = 394

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 168 FVYT*LENGVMMTYNKLFKVKFSYYYYCNI 79
           F++T L  G+M   N LF  +F    Y N+
Sbjct: 270 FLFTELPQGIMAILNALFTTQFHQMVYLNL 299


>U13876-12|AAA21169.1|  363|Caenorhabditis elegans Hypothetical
           protein F57B9.3 protein.
          Length = 363

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 9/26 (34%), Positives = 18/26 (69%)
 Frame = +3

Query: 273 IIFFTQNDL*KQRRLQNSYKIRLNKI 350
           I FFT+ND+   ++++N Y  R+ ++
Sbjct: 327 ISFFTENDISDLKKIENHYSTRIEEM 352


>AL021181-1|CAA15983.1|  394|Caenorhabditis elegans Hypothetical
           protein Y54G11B.1 protein.
          Length = 394

 Score = 26.6 bits (56), Expect = 7.2
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = -1

Query: 168 FVYT*LENGVMMTYNKLFKVKFSYYYYCNI 79
           F++T L  G+M   N LF  +F    Y N+
Sbjct: 270 FLFTELPQGIMAILNALFTTQFHQMVYLNL 299


>Z93384-3|CAB07634.3| 1341|Caenorhabditis elegans Hypothetical
           protein H08M01.2b protein.
          Length = 1341

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 254 ECSKRYLNVFYPTE 213
           EC K YLN+FY T+
Sbjct: 213 ECKKNYLNLFYSTK 226


>Z93384-2|CAE54901.1| 1320|Caenorhabditis elegans Hypothetical
           protein H08M01.2a protein.
          Length = 1320

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = -2

Query: 254 ECSKRYLNVFYPTE 213
           EC K YLN+FY T+
Sbjct: 213 ECKKNYLNLFYSTK 226


>Z81479-1|CAB03944.1| 1043|Caenorhabditis elegans Hypothetical
           protein C34F6.1 protein.
          Length = 1043

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 155 YVYTKFSCN*MCTQIVKVRIQWDKRRSNIASNIQV 259
           Y   + +C   C Q  + R +W+ R +NI  N+QV
Sbjct: 37  YYPVRTNCQNRCNQ--QTRYRWNVRPTNIRPNVQV 69


>AC024808-1|AAK29927.1|  309|Caenorhabditis elegans Hypothetical
           protein Y53G8AM.4 protein.
          Length = 309

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -3

Query: 232 TSFIPLNSHFHDLRAHLIT*EFRIYIVGKWSYDDL 128
           T+F+P++S FHD   +L    F +Y  G   Y ++
Sbjct: 22  TTFLPISSIFHDNFEYLNEIWFLVYFYGFCVYSNI 56


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,599,871
Number of Sequences: 27780
Number of extensions: 155631
Number of successful extensions: 271
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 270
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)