Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_A16
         (638 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC014952-1|AAH14952.1|  590|Homo sapiens TH1-like (Drosophila) p...    60   5e-09
AL109840-5|CAC09368.1|  590|Homo sapiens TH1-like (Drosophila) p...    60   5e-09
AK023927-1|BAB14729.1|  590|Homo sapiens protein ( Homo sapiens ...    60   5e-09
AJ238379-1|CAB64339.1|  581|Homo sapiens putative TH1 protein pr...    60   5e-09
AJ238375-1|CAB64373.1|  389|Homo sapiens putative protein TH1 pr...    60   5e-09
AJ238374-1|CAB64337.1|  414|Homo sapiens putative protein TH1 pr...    60   5e-09
AK001316-1|BAA91618.1|  581|Homo sapiens protein ( Homo sapiens ...    59   2e-08
M99063-1|AAA35746.1|  638|Homo sapiens cytokeratin 2 protein.          30   8.0  
AJ564103-1|CAD91891.1|  638|Homo sapiens keratin 2p protein.           30   8.0  

>BC014952-1|AAH14952.1|  590|Homo sapiens TH1-like (Drosophila)
           protein.
          Length = 590

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -2

Query: 148 NLIQVLYP*VLDAIAPPYTPEFVQLVLPMVENEEITGTMRAEGENEP 8
           +LI+     VLD IAPPYT +FVQL LP++EN+ I GT++ EGE++P
Sbjct: 528 SLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKTEGEHDP 574


>AL109840-5|CAC09368.1|  590|Homo sapiens TH1-like (Drosophila)
           protein.
          Length = 590

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -2

Query: 148 NLIQVLYP*VLDAIAPPYTPEFVQLVLPMVENEEITGTMRAEGENEP 8
           +LI+     VLD IAPPYT +FVQL LP++EN+ I GT++ EGE++P
Sbjct: 528 SLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKTEGEHDP 574


>AK023927-1|BAB14729.1|  590|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13865 fis, clone THYRO1001204, weakly similar to
           Homo sapiens cathepsin Z precursor (CTSZ) gene. ).
          Length = 590

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -2

Query: 148 NLIQVLYP*VLDAIAPPYTPEFVQLVLPMVENEEITGTMRAEGENEP 8
           +LI+     VLD IAPPYT +FVQL LP++EN+ I GT++ EGE++P
Sbjct: 528 SLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKTEGEHDP 574


>AJ238379-1|CAB64339.1|  581|Homo sapiens putative TH1 protein
           protein.
          Length = 581

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -2

Query: 148 NLIQVLYP*VLDAIAPPYTPEFVQLVLPMVENEEITGTMRAEGENEP 8
           +LI+     VLD IAPPYT +FVQL LP++EN+ I GT++ EGE++P
Sbjct: 519 SLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKTEGEHDP 565


>AJ238375-1|CAB64373.1|  389|Homo sapiens putative protein TH1
           protein.
          Length = 389

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -2

Query: 148 NLIQVLYP*VLDAIAPPYTPEFVQLVLPMVENEEITGTMRAEGENEP 8
           +LI+     VLD IAPPYT +FVQL LP++EN+ I GT++ EGE++P
Sbjct: 327 SLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKTEGEHDP 373


>AJ238374-1|CAB64337.1|  414|Homo sapiens putative protein TH1
           protein.
          Length = 414

 Score = 60.5 bits (140), Expect = 5e-09
 Identities = 26/47 (55%), Positives = 36/47 (76%)
 Frame = -2

Query: 148 NLIQVLYP*VLDAIAPPYTPEFVQLVLPMVENEEITGTMRAEGENEP 8
           +LI+     VLD IAPPYT +FVQL LP++EN+ I GT++ EGE++P
Sbjct: 352 SLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKTEGEHDP 398


>AK001316-1|BAA91618.1|  581|Homo sapiens protein ( Homo sapiens
           cDNA FLJ10454 fis, clone NT2RP1001011, weakly similar to
           Drosophila melanogaster putative 43 kDa protein mRNA. ).
          Length = 581

 Score = 58.8 bits (136), Expect = 2e-08
 Identities = 26/47 (55%), Positives = 35/47 (74%)
 Frame = -2

Query: 148 NLIQVLYP*VLDAIAPPYTPEFVQLVLPMVENEEITGTMRAEGENEP 8
           +LI+     VLD IAPPYT +FVQL LP++EN+ I GT++ EGE+ P
Sbjct: 519 SLIRYFVTEVLDVIAPPYTSDFVQLFLPILENDSIAGTIKTEGEHVP 565


>M99063-1|AAA35746.1|  638|Homo sapiens cytokeratin 2 protein.
          Length = 638

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +3

Query: 24  SALIVPVISSFSTMGRTSCTNSGVYGGAIASKTYGYK 134
           SA+ + V+S+ ++   +S ++ GV+GG   S + GYK
Sbjct: 502 SAVCISVVSNVTSTSGSSGSSRGVFGGVSGSGSGGYK 538


>AJ564103-1|CAD91891.1|  638|Homo sapiens keratin 2p protein.
          Length = 638

 Score = 29.9 bits (64), Expect = 8.0
 Identities = 13/37 (35%), Positives = 24/37 (64%)
 Frame = +3

Query: 24  SALIVPVISSFSTMGRTSCTNSGVYGGAIASKTYGYK 134
           SA+ + V+S+ ++   +S ++ GV+GG   S + GYK
Sbjct: 502 SAVCISVVSNVTSTSGSSGSSRGVFGGVSGSGSGGYK 538


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,741,888
Number of Sequences: 237096
Number of extensions: 2013349
Number of successful extensions: 2594
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 2563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2594
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)