Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_A16
(638 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 23 3.3
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 23 3.3
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 23 3.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.4
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.4
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 4.4
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 4.4
AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein. 21 7.6
AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein. 21 7.6
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 21 7.6
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 21 7.6
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 118 LDAIAPPYTPEFVQLVLPMVENEEITG 38
LDAI PP P L LP+ + +I G
Sbjct: 232 LDAILPPSRPTDKALRLPLQDVYKIGG 258
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 118 LDAIAPPYTPEFVQLVLPMVENEEITG 38
LDAI PP P L LP+ + +I G
Sbjct: 175 LDAILPPTRPTDKALRLPLQDVYKIGG 201
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 22.6 bits (46), Expect = 3.3
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 118 LDAIAPPYTPEFVQLVLPMVENEEITG 38
LDAI PP P L LP+ + +I G
Sbjct: 232 LDAILPPTRPTDKALRLPLQDVYKIGG 258
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -2
Query: 184 GQFIIVNIILFSNLIQVLYP*VLDAIAPPYTPEFVQLVLPMVENEEI 44
G I++++ +F NL+ P V DAI P + ++ MV + +
Sbjct: 229 GVTILLSLTVFLNLVAETLPQVSDAI--PLLGSYFNCIMFMVASSVV 273
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -2
Query: 184 GQFIIVNIILFSNLIQVLYP*VLDAIAPPYTPEFVQLVLPMVENEEI 44
G I++++ +F NL+ P V DAI P + ++ MV + +
Sbjct: 229 GVTILLSLTVFLNLVAETLPQVSDAI--PLLGSYFNCIMFMVASSVV 273
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -2
Query: 184 GQFIIVNIILFSNLIQVLYP*VLDAIAPPYTPEFVQLVLPMVENEEI 44
G I++++ +F NL+ P V DAI P + ++ MV + +
Sbjct: 229 GVTILLSLTVFLNLVAETLPQVSDAI--PLLGSYFNCIMFMVASSVV 273
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 22.2 bits (45), Expect = 4.4
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -2
Query: 184 GQFIIVNIILFSNLIQVLYP*VLDAIAPPYTPEFVQLVLPMVENEEI 44
G I++++ +F NL+ P V DAI P + ++ MV + +
Sbjct: 297 GVTILLSLTVFLNLVAETLPQVSDAI--PLLGSYFNCIMFMVASSVV 341
>AM158085-1|CAJ43389.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 154 FSNLIQVLYP*VLDAIAPPYTPEFVQ 77
F NL +V+ + A+ YTPE +
Sbjct: 127 FQNLKEVMLEVLRQALGKQYTPEVAE 152
>AM158084-1|CAJ43388.1| 171|Apis mellifera globin 1 protein.
Length = 171
Score = 21.4 bits (43), Expect = 7.6
Identities = 9/26 (34%), Positives = 14/26 (53%)
Frame = -2
Query: 154 FSNLIQVLYP*VLDAIAPPYTPEFVQ 77
F NL +V+ + A+ YTPE +
Sbjct: 127 FQNLKEVMLEVLRQALGKQYTPEVAE 152
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 21.4 bits (43), Expect = 7.6
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = -2
Query: 70 LPMVENEEITGTM 32
LPMV+N E TG +
Sbjct: 309 LPMVDNPESTGNL 321
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.4 bits (43), Expect = 7.6
Identities = 7/14 (50%), Positives = 11/14 (78%)
Frame = +3
Query: 57 STMGRTSCTNSGVY 98
S +GR++C + GVY
Sbjct: 292 SALGRSACHSPGVY 305
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,300
Number of Sequences: 438
Number of extensions: 4165
Number of successful extensions: 16
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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