Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_pT_A15
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132949-16|CAB61089.1| 535|Caenorhabditis elegans Hypothetical... 88 5e-18
AC024775-2|AAK68456.1| 452|Caenorhabditis elegans Hypothetical ... 33 0.21
Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical pr... 31 0.49
Z83220-3|CAB05702.1| 493|Caenorhabditis elegans Hypothetical pr... 30 1.1
U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical pr... 30 1.1
AL132860-4|CAB60496.1| 762|Caenorhabditis elegans Hypothetical ... 30 1.5
Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z69383-7|CAJ90501.1| 277|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z67755-6|CAA91759.1| 311|Caenorhabditis elegans Hypothetical pr... 28 6.0
U00033-4|AAC48305.2| 348|Caenorhabditis elegans Serpentine rece... 28 6.0
AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical ... 27 7.9
>AL132949-16|CAB61089.1| 535|Caenorhabditis elegans Hypothetical
protein Y53F4B.18 protein.
Length = 535
Score = 87.8 bits (208), Expect = 5e-18
Identities = 64/199 (32%), Positives = 94/199 (47%), Gaps = 9/199 (4%)
Frame = -2
Query: 607 TNDVCVSSXRAELKGAMKRAISKITQELTTA----DAPQPYHHEGFNHMYVLWKYWMTKE 440
T + E++ A+K+A+ + ++ + P H F + L + T +
Sbjct: 317 TGSPIIQPLEDEMRYALKKAVRFLERKYDIVAQGIELPSAKHAMEF---FTLSMHEDTTD 373
Query: 439 PD-NTALLYTNNTT-EANGILELIKKVCGFSKHCLFSVVR-LIELQFLPAVDSAWAEKLT 269
P N +L T T E N E+ K + G S H L +V +I+ + P ++ L
Sbjct: 374 PAFNKLMLCTKGTKGEVNCFTEIFKYMAGNSNHTLSGIVAGIIDSRDPPFSEAHTKNLLY 433
Query: 268 KE--FKEDLFTKLGENGVLLMPSAPHVAPYHYSCLLRPFNFAYFAVVNALKCPATQVPLG 95
K K + LG +G+LL PS P A YH +L PFNF Y A+ N L P Q PLG
Sbjct: 434 KRDRLKRQVKELLGTDGILLFPSWPCTAMYHNEPILAPFNFCYTALWNVLSVPVVQCPLG 493
Query: 94 KDSQGLPLGIQVLAAPNND 38
DS+GLPLG+QV+ D
Sbjct: 494 LDSRGLPLGVQVIGNQYTD 512
>AC024775-2|AAK68456.1| 452|Caenorhabditis elegans Hypothetical
protein Y41D4A.6 protein.
Length = 452
Score = 32.7 bits (71), Expect = 0.21
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Frame = -2
Query: 283 AEKLTKEFKEDLFTKLGENGVLLMPSAPHVAPYHY----SCLLRPFNFAYFA-VVNALKC 119
A K+ + ++L E +++ P+A AP + + + N YF N
Sbjct: 350 ALKVRRIIHDELRQAFREVDLIVTPTASGTAPKYSELRDTLFSKEDNDDYFTQAANLAGI 409
Query: 118 PATQVPLGKDSQGLPLGIQVLA 53
P+ VP+G GLP+G+Q++A
Sbjct: 410 PSISVPVGVAEDGLPIGVQLMA 431
>Z68270-4|CAE46687.1| 755|Caenorhabditis elegans Hypothetical
protein ZC410.4b protein.
Length = 755
Score = 31.5 bits (68), Expect = 0.49
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -2
Query: 319 ELQFLPAVDSAWAEKLTKEFKEDLFTKLGENGVLLMPSAPHVAPYHYSCLLRPF 158
+L F +S W F LFT +G + + SA +A YSC+ PF
Sbjct: 166 KLDFAVKNESQWTFMSAMYFAGTLFTTIGYGDIACITSAGRIATVIYSCVGIPF 219
>Z68270-3|CAA92568.1| 769|Caenorhabditis elegans Hypothetical
protein ZC410.4a protein.
Length = 769
Score = 31.5 bits (68), Expect = 0.49
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = -2
Query: 319 ELQFLPAVDSAWAEKLTKEFKEDLFTKLGENGVLLMPSAPHVAPYHYSCLLRPF 158
+L F +S W F LFT +G + + SA +A YSC+ PF
Sbjct: 166 KLDFAVKNESQWTFMSAMYFAGTLFTTIGYGDIACITSAGRIATVIYSCVGIPF 219
>Z83220-3|CAB05702.1| 493|Caenorhabditis elegans Hypothetical
protein C34B7.3 protein.
Length = 493
Score = 30.3 bits (65), Expect = 1.1
Identities = 25/97 (25%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = -2
Query: 337 SVVRLIELQFLPAVDSAWAEKLTKEFKEDLFTKLGENGVLLMPSAPHVAPYHYSCLLRPF 158
+++ ++ FL V++ +K E+L +G ++M H+ PY + L +
Sbjct: 305 TIIIVLRFAFLYLVNNPETQK---RIHEELDRNVGRERQVVMDDQKHL-PYTCAFLQEVY 360
Query: 157 NFAYFAVVNALKCPATQVPLGKDSQG--LPLGIQVLA 53
Y VN L+C T V +D +G L G +V+A
Sbjct: 361 RLGYVLPVNFLRCTLTDV---EDCEGYRLNAGTRVIA 394
>U97006-1|AAC47965.1| 2076|Caenorhabditis elegans Hypothetical
protein C13F10.4 protein.
Length = 2076
Score = 30.3 bits (65), Expect = 1.1
Identities = 15/50 (30%), Positives = 24/50 (48%)
Frame = -2
Query: 250 LFTKLGENGVLLMPSAPHVAPYHYSCLLRPFNFAYFAVVNALKCPATQVP 101
L ++G + + L A + + + CL P A +A L+C AT VP
Sbjct: 441 LVRQIGTSVMSLFTEATGIMEHIFKCLTHPLASARYAAAWCLRCIATAVP 490
>AL132860-4|CAB60496.1| 762|Caenorhabditis elegans Hypothetical
protein Y56A3A.5 protein.
Length = 762
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = -2
Query: 94 KDSQGLPLGIQVLAAPNNDGLCLTGARX*EK 2
K++ G+P +Q++A PN + +CL R E+
Sbjct: 694 KETSGMPNSVQIVALPNQEEMCLKVMRIVEE 724
>Z81095-1|CAB03158.1| 667|Caenorhabditis elegans Hypothetical
protein F59F4.1 protein.
Length = 667
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 323 QTNHAEETMLAEATHLFN*LQNTISLSRVVGVEQCRI 433
Q H +LAE L + L++ +S G+EQCR+
Sbjct: 368 QLTHGNTELLAELHVLSSGLKSLVSWDTAQGIEQCRL 404
>Z75545-5|CAA99883.3| 836|Caenorhabditis elegans Hypothetical
protein K10D3.1 protein.
Length = 836
Score = 28.3 bits (60), Expect = 4.5
Identities = 11/36 (30%), Positives = 18/36 (50%)
Frame = +2
Query: 389 TISLSRVVGVEQCRIVGFLCHPVLPEYVHVVEALMV 496
T+ + + G+E C I F H V EY+ + +V
Sbjct: 244 TVDIDSIRGIEDCNITSFGVHDVNSEYIEDIRQEIV 279
>Z69383-7|CAJ90501.1| 277|Caenorhabditis elegans Hypothetical
protein F13E9.13 protein.
Length = 277
Score = 28.3 bits (60), Expect = 4.5
Identities = 30/121 (24%), Positives = 58/121 (47%), Gaps = 3/121 (2%)
Frame = -2
Query: 379 LIKKVCGFSKHCLFSVVRLIELQFLPAVDSAWAEKLTKEFKE-DLFTKLGENGVLLMPSA 203
++ K+ S+ +F ++ + L P+ + L K KE D++ K G +GV++
Sbjct: 6 VVSKLLNSSRPLVFGMIHVPALPGTPSNTLPMSAILKKVRKEADVYFKNGVDGVIV--EN 63
Query: 202 PHVAPYHYSCLLRPFNFAYFAVVNALKCPATQVPLGKDSQ--GLPLGIQVLAAPNNDGLC 29
H PY ++P A +V+++ + Q+ +D+ GIQ+LAA N + L
Sbjct: 64 MHDVPY-----VKPP--ASPEIVSSMALASDQLVKSRDAHHPAALTGIQILAAANREALA 116
Query: 28 L 26
+
Sbjct: 117 V 117
>Z67755-6|CAA91759.1| 311|Caenorhabditis elegans Hypothetical
protein F54F7.6 protein.
Length = 311
Score = 27.9 bits (59), Expect = 6.0
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = -2
Query: 568 KGAMKRAISKITQELTTADAPQPYHHEGFNHMYVLWKYWMTKE 440
K +K+ K +++ + +P+P+ FN ++ WMTKE
Sbjct: 202 KNLVKKDNRKSLKDMDESKSPKPFELAVFNQDGGMFSVWMTKE 244
>U00033-4|AAC48305.2| 348|Caenorhabditis elegans Serpentine
receptor, class b (beta)protein 7 protein.
Length = 348
Score = 27.9 bits (59), Expect = 6.0
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 2/37 (5%)
Frame = +1
Query: 4 FLXLLLPSGKARHC--LVQPTLESQAAILGCLFLRVP 108
F+ +LLP + C L+QP +LGCL + +P
Sbjct: 82 FIQVLLPFISEQKCDLLIQPKYYKLGNLLGCLLMTIP 118
>AF016671-4|AAB66110.2| 338|Caenorhabditis elegans Hypothetical
protein W09G10.3 protein.
Length = 338
Score = 27.5 bits (58), Expect = 7.9
Identities = 16/37 (43%), Positives = 22/37 (59%)
Frame = -1
Query: 167 AAFQLRLFRRSQRTEVSRYSGTLRKRQPRIAAWDSSV 57
A ++R FRRS R VSR +RK +PR +A S+
Sbjct: 3 AVIRMRTFRRSTRNAVSR----MRKPKPRASAKQRSL 35
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,797,409
Number of Sequences: 27780
Number of extensions: 279836
Number of successful extensions: 803
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 803
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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