Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_A07
         (612 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein.               30   7.4  
BC062582-1|AAH62582.1| 1040|Homo sapiens DNA cross-link repair 1...    30   7.4  
BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1...    30   7.4  
AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1...    30   7.4  
AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1...    30   7.4  

>D42045-1|BAA07646.2| 1044|Homo sapiens KIAA0086 protein.
          Length = 1044

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 252 NVSIEERPIFWNNCVNC*SPHGLALGSTPSRHV 154
           +VS + RP++   C NC  P    +G TP  HV
Sbjct: 113 HVSPKIRPVYDGYCPNCQMPFSSLIGQTPRWHV 145


>BC062582-1|AAH62582.1| 1040|Homo sapiens DNA cross-link repair 1A
           (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 252 NVSIEERPIFWNNCVNC*SPHGLALGSTPSRHV 154
           +VS + RP++   C NC  P    +G TP  HV
Sbjct: 109 HVSPKIRPVYDGYCPNCQMPFSSLIGQTPRWHV 141


>BC013124-1|AAH13124.1| 1040|Homo sapiens DNA cross-link repair 1A
           (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 252 NVSIEERPIFWNNCVNC*SPHGLALGSTPSRHV 154
           +VS + RP++   C NC  P    +G TP  HV
Sbjct: 109 HVSPKIRPVYDGYCPNCQMPFSSLIGQTPRWHV 141


>AY607842-1|AAT09762.1| 1040|Homo sapiens DNA cross-link repair 1A
           (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 252 NVSIEERPIFWNNCVNC*SPHGLALGSTPSRHV 154
           +VS + RP++   C NC  P    +G TP  HV
Sbjct: 109 HVSPKIRPVYDGYCPNCQMPFSSLIGQTPRWHV 141


>AL592546-2|CAI12637.1| 1040|Homo sapiens DNA cross-link repair 1A
           (PSO2 homolog, S. cerevisiae) protein.
          Length = 1040

 Score = 29.9 bits (64), Expect = 7.4
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -1

Query: 252 NVSIEERPIFWNNCVNC*SPHGLALGSTPSRHV 154
           +VS + RP++   C NC  P    +G TP  HV
Sbjct: 109 HVSPKIRPVYDGYCPNCQMPFSSLIGQTPRWHV 141


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,883,500
Number of Sequences: 237096
Number of extensions: 1242583
Number of successful extensions: 2451
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2414
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2451
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6522878360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)