Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_A07
         (612 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z83103-9|CAI79157.1|  376|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U40946-2|AAO91682.1|  780|Caenorhabditis elegans Hypothetical pr...    27   8.0  

>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical protein
            R10E11.1b protein.
          Length = 2056

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -1

Query: 267  NKTMFNVSIEERPIFWNNCVNC*SPHGLALGSTPS 163
            + T +NV++ ER  +   C +   P G++L   P+
Sbjct: 1011 SSTQYNVTVTERYTYCQKCFDALPPEGISLSENPN 1045


>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical protein
            R10E11.1a protein.
          Length = 2045

 Score = 28.7 bits (61), Expect = 3.5
 Identities = 10/35 (28%), Positives = 19/35 (54%)
 Frame = -1

Query: 267  NKTMFNVSIEERPIFWNNCVNC*SPHGLALGSTPS 163
            + T +NV++ ER  +   C +   P G++L   P+
Sbjct: 1000 SSTQYNVTVTERYTYCQKCFDALPPEGISLSENPN 1034


>Z83103-9|CAI79157.1|  376|Caenorhabditis elegans Hypothetical
           protein D1025.10 protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 22/86 (25%), Positives = 36/86 (41%), Gaps = 2/86 (2%)
 Frame = -2

Query: 476 QVASPSSEAGRSAGWVLEITAMRSTPACVIIIISTYFAYLCRPSDNKQQSVP--KSNENY 303
           +V S   E    AGW LE  A       ++ II  YF+++      K+   P    +E +
Sbjct: 281 KVPSVGKEHFEKAGWFLEHLAPDDVANVLLDIIKDYFSHVDLFMQGKKTKEPLWDLSEEF 340

Query: 302 EDQSLEAFVHILIKQCLMLVLKSDQY 225
            D   E+    L   CL+ ++   +Y
Sbjct: 341 YDHMFES-NPTLHTDCLLFLISLKEY 365


>U40946-2|AAO91682.1|  780|Caenorhabditis elegans Hypothetical
           protein W05H9.4 protein.
          Length = 780

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = -2

Query: 392 VIIIISTYFAYLCRPSDNKQQSVPKSNENYEDQSLE 285
           V++ I  Y+   C   +NK+ S PK  + Y     E
Sbjct: 182 VLMAIQVYYRIRCPMRENKEPSFPKDAQRYSPYDYE 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,875,840
Number of Sequences: 27780
Number of extensions: 186691
Number of successful extensions: 456
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 445
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 456
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1321669750
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)