Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_pT_A01
         (850 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78537-4|CAB01721.1|  569|Caenorhabditis elegans Hypothetical pr...    31   0.78 
Z68014-14|CAA92030.1|  569|Caenorhabditis elegans Hypothetical p...    31   0.78 
AF040647-6|AAR30205.3|  436|Caenorhabditis elegans Hypothetical ...    31   0.78 
U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical pr...    31   1.0  
Z77660-4|CAB01172.1|  501|Caenorhabditis elegans Hypothetical pr...    29   3.2  
AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical ...    28   9.6  

>Z78537-4|CAB01721.1|  569|Caenorhabditis elegans Hypothetical
           protein W04G3.8 protein.
          Length = 569

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 538 ILDLHSGALSMGQHFINFYKRSEGKNVFTEKDFTTYKVVKNKIKYSI 398
           +L LHS   S  Q F  +    EGKN F +  +  Y ++ N +KY +
Sbjct: 466 MLQLHSSETSDAQPFWIYKLGPEGKNSFGDSQY-EYAIISNWVKYPV 511


>Z68014-14|CAA92030.1|  569|Caenorhabditis elegans Hypothetical
           protein W04G3.8 protein.
          Length = 569

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -1

Query: 538 ILDLHSGALSMGQHFINFYKRSEGKNVFTEKDFTTYKVVKNKIKYSI 398
           +L LHS   S  Q F  +    EGKN F +  +  Y ++ N +KY +
Sbjct: 466 MLQLHSSETSDAQPFWIYKLGPEGKNSFGDSQY-EYAIISNWVKYPV 511


>AF040647-6|AAR30205.3|  436|Caenorhabditis elegans Hypothetical
           protein F54D12.7 protein.
          Length = 436

 Score = 31.5 bits (68), Expect = 0.78
 Identities = 16/36 (44%), Positives = 19/36 (52%)
 Frame = +2

Query: 359 QIYFFWVNSEIMPYRILYFVFDNFVSCKILFCEYIF 466
           +IYFF  +S I  Y IL FVF    SC +   E  F
Sbjct: 361 RIYFFKSSSNISKYSILSFVFQKIFSCFLSSLETCF 396


>U23412-5|AAK21467.2|  492|Caenorhabditis elegans Hypothetical
           protein T10F2.4 protein.
          Length = 492

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 12/40 (30%), Positives = 21/40 (52%)
 Frame = +3

Query: 660 HPSNLSISLRYADEHSTIWPLPDITSFCLANILKAPSFDV 779
           HP N++     AD H  +W   D +S  + ++ +AP  D+
Sbjct: 260 HPDNITAISASADSHIRVWSATDSSSKAIIDVHQAPVTDI 299


>Z77660-4|CAB01172.1|  501|Caenorhabditis elegans Hypothetical
           protein F38H4.4 protein.
          Length = 501

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 7/124 (5%)
 Frame = -1

Query: 439 TTYKVVKNKIKYSIGHYFGVNPEKIYLT-----HPTFFSEITSKEAVTVHDEYWHPHVD- 278
           T ++ VKN  K        ++  K++L+     H ++    T K A+       H   D 
Sbjct: 218 TKHQFVKNMHKNRFADVICLDHSKVHLSDSSYIHASYLELDTQKRAILTQLPLPHTSADF 277

Query: 277 -KETYKSFHYTTLLYLTDYNIDFKGGRFVFIDEKYNRTIEPRKGRVSMFTSGKENLHYVE 101
            +   +      LL LTD   D  GG FVF   +     E R  RV  F   +    +V 
Sbjct: 278 WQMIIEQRVKCVLLLLTDSEYDSLGGDFVFPRNQDFLNFEERSIRVGEFKRVEIMDGWVL 337

Query: 100 KVTS 89
           KV S
Sbjct: 338 KVVS 341


>AF101319-5|AAC69356.2|  530|Caenorhabditis elegans Hypothetical
           protein K08D9.6 protein.
          Length = 530

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
 Frame = -1

Query: 358 THPTFFSEITSKEAV--TVHDEYW----HPHVDKETYKSFHYTTLLYLTDYNIDFKGGRF 197
           T+PT+  E  ++  V  T +  ++    H  V  +++K+F++  ++   + +   K G+ 
Sbjct: 302 TYPTYLQEFRAEWEVDPTSNSIFYGRREHEFVKAKSFKTFNFKEIVSTLESSDTVKRGKV 361

Query: 196 VFIDEKYNRT 167
           V   E+YN T
Sbjct: 362 VVKPERYNST 371


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,990,499
Number of Sequences: 27780
Number of extensions: 410158
Number of successful extensions: 1110
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1110
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2108493618
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)