Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_P24
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    26   0.29 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   6.2  
EF592537-1|ABQ95983.1|  593|Tribolium castaneum beta-N-acetylglu...    21   8.2  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.2  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   8.2  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.2  

>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 26.2 bits (55), Expect = 0.29
 Identities = 16/68 (23%), Positives = 29/68 (42%)
 Frame = +2

Query: 134 MGNIKCKRVKITQSEPVAEETNNERIRTLKTDVSDVNSSKDAQDESRNSIDENKEKDHDN 313
           +  ++C+ +K    EP  +E  +   R  KT   D+  S   QD    ++ + +EK    
Sbjct: 77  VARVQCRSIKNECPEPTCDEPVHRPGRCCKTCPGDLYDSDIIQDIVPQNVLDEEEKSSTK 136

Query: 314 ASSASTVE 337
             +A   E
Sbjct: 137 HYAALLTE 144


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/25 (24%), Positives = 15/25 (60%)
 Frame = -3

Query: 205 FIVRLLSHRLTLSYFNSFTFNIAHF 131
           + ++L++HR+  +    +  N+ HF
Sbjct: 324 YSLQLINHRVVFTAMGLYVLNMEHF 348


>EF592537-1|ABQ95983.1|  593|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG2 protein.
          Length = 593

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +2

Query: 263 DESRNSIDENKEKDHDNASSASTVEVL 343
           D +RN +  +K K H +  +AS + VL
Sbjct: 223 DTARNFLTVSKIKKHIDGMAASKLNVL 249


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 81  RIN*FR*VLHEIRPLPNKVKAKLI 10
           R+N    V    RPLPN ++ K++
Sbjct: 41  RVNQLGGVFINGRPLPNHIRLKIV 64


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 585 CDLACSKRVLFYKGRVPYQLI 647
           CD  C + +   KG++P  L+
Sbjct: 12  CDNFCHRYISCLKGKMPIDLV 32


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 585 CDLACSKRVLFYKGRVPYQLI 647
           CD  C + +   KG++P  L+
Sbjct: 168 CDNFCHRYISCLKGKMPIDLV 188


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,867
Number of Sequences: 336
Number of extensions: 3896
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)