BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_P23
(615 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger pr... 26 1.1
AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotens... 25 1.5
AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein. 25 1.9
AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein p... 24 3.4
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T... 23 7.8
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T... 23 7.8
AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein. 23 7.8
>EU068741-1|ABU40241.1| 993|Anopheles gambiae anion exchanger
protein.
Length = 993
Score = 25.8 bits (54), Expect = 1.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = +1
Query: 85 FRLTIKLQFWRVSHELLNNYAYKN 156
F +IKL V H LL+ Y YKN
Sbjct: 576 FETSIKLVSVYVRHPLLSEYVYKN 599
>AM085517-1|CAJ30215.1| 339|Anopheles gambiae putative angiotensin
converting enzymeprecursor protein.
Length = 339
Score = 25.4 bits (53), Expect = 1.5
Identities = 9/11 (81%), Positives = 9/11 (81%)
Frame = +1
Query: 550 RTRVPDKPNYP 582
RTR PD PNYP
Sbjct: 250 RTRYPDDPNYP 260
>AY353563-1|AAQ57599.1| 1132|Anopheles gambiae relish protein.
Length = 1132
Score = 25.0 bits (52), Expect = 1.9
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = +1
Query: 1 EFGRPMKFTKFYVVWNALSSDGRKIEKYFRL 93
E G + F F+ VW S R + YF +
Sbjct: 1069 ELGSLLDFHSFFTVWEQAPSPARMLLGYFEM 1099
>AB090824-1|BAC57923.1| 298|Anopheles gambiae gag-like protein
protein.
Length = 298
Score = 24.2 bits (50), Expect = 3.4
Identities = 14/56 (25%), Positives = 24/56 (42%)
Frame = -2
Query: 563 GTRVRRGRPSTQPAACDTCGQTTMSVSLAGSDGVVLPSAPPIALSARSLSSTNITC 396
G VR + + + + C CG +D L P ++A S + T++TC
Sbjct: 243 GHMVRECQGTNRSSLCIRCGAANHKAVNCTNDVKCLLCGGPHRIAAASCAVTSMTC 298
>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1977
Score = 23.0 bits (47), Expect = 7.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 530 QPAACDTCGQTTMSVSLAGSDGVVLPSA 447
QP+A + T SV G+D VV+P A
Sbjct: 590 QPSASEVADYPTASVPAGGAD-VVVPGA 616
>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
phosphatase protein.
Length = 1978
Score = 23.0 bits (47), Expect = 7.8
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 530 QPAACDTCGQTTMSVSLAGSDGVVLPSA 447
QP+A + T SV G+D VV+P A
Sbjct: 590 QPSASEVADYPTASVPTGGAD-VVVPGA 616
>AF295693-1|AAL55241.1| 786|Anopheles gambiae polyprotein protein.
Length = 786
Score = 23.0 bits (47), Expect = 7.8
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -2
Query: 557 RVRRGRPSTQPAACDTCGQ 501
RV + + ++P AC CGQ
Sbjct: 63 RVLKAKSESKPGACFFCGQ 81
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 537,941
Number of Sequences: 2352
Number of extensions: 9498
Number of successful extensions: 70
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60132501
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -