Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_P23
(615 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13951-1|CAA74289.1| 784|Drosophila melanogaster oxysterol bind... 53 3e-07
AY129448-1|AAM76190.1| 784|Drosophila melanogaster LD31802p pro... 53 3e-07
AE014297-3675|AAF56371.1| 784|Drosophila melanogaster CG6708-PA... 53 3e-07
AJ132670-1|CAA10727.1| 158|Drosophila melanogaster homeodomain ... 29 3.8
BT028833-1|ABI34214.2| 158|Drosophila melanogaster RT01054p pro... 28 8.7
AY118274-1|AAM48303.1| 1443|Drosophila melanogaster AT03867p pro... 28 8.7
AE014297-3190|AAF56025.1| 158|Drosophila melanogaster CG5264-PA... 28 8.7
AE014296-1208|AAF50601.2| 1770|Drosophila melanogaster CG32387-P... 28 8.7
AE014296-1207|ABI31239.1| 1766|Drosophila melanogaster CG32387-P... 28 8.7
AE014296-1206|AAF50600.2| 1765|Drosophila melanogaster CG32387-P... 28 8.7
>Y13951-1|CAA74289.1| 784|Drosophila melanogaster oxysterol binding
protein homologueprotein.
Length = 784
Score = 53.2 bits (122), Expect = 3e-07
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +1
Query: 394 QQVIFVEDKERAESAMGGADGSTTPSLPAKDTDIVVWPHVSQAAGCVDGRPRRTRVPDKP 573
QQV V A G D +LPAK++ ++ + + + RR RVPDKP
Sbjct: 338 QQVCLVSAPRVASGGQGDDDDDVDKALPAKESTDSIYGR-NWNPDLI--KKRRDRVPDKP 394
Query: 574 NYPLSLWSIMXNCI 615
N+P+SLW IM NCI
Sbjct: 395 NHPISLWGIMKNCI 408
>AY129448-1|AAM76190.1| 784|Drosophila melanogaster LD31802p
protein.
Length = 784
Score = 53.2 bits (122), Expect = 3e-07
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +1
Query: 394 QQVIFVEDKERAESAMGGADGSTTPSLPAKDTDIVVWPHVSQAAGCVDGRPRRTRVPDKP 573
QQV V A G D +LPAK++ ++ + + + RR RVPDKP
Sbjct: 338 QQVCLVSAPRVASGGQGDDDDDVDKALPAKESTDSIYGR-NWNPDLI--KKRRDRVPDKP 394
Query: 574 NYPLSLWSIMXNCI 615
N+P+SLW IM NCI
Sbjct: 395 NHPISLWGIMKNCI 408
>AE014297-3675|AAF56371.1| 784|Drosophila melanogaster CG6708-PA
protein.
Length = 784
Score = 53.2 bits (122), Expect = 3e-07
Identities = 29/74 (39%), Positives = 39/74 (52%)
Frame = +1
Query: 394 QQVIFVEDKERAESAMGGADGSTTPSLPAKDTDIVVWPHVSQAAGCVDGRPRRTRVPDKP 573
QQV V A G D +LPAK++ ++ + + + RR RVPDKP
Sbjct: 338 QQVCLVSAPRVASGGQGDDDDDVDKALPAKESTDSIYGR-NWNPDLI--KKRRDRVPDKP 394
Query: 574 NYPLSLWSIMXNCI 615
N+P+SLW IM NCI
Sbjct: 395 NHPISLWGIMKNCI 408
>AJ132670-1|CAA10727.1| 158|Drosophila melanogaster homeodomain
protein protein.
Length = 158
Score = 29.5 bits (63), Expect = 3.8
Identities = 20/75 (26%), Positives = 30/75 (40%)
Frame = -3
Query: 283 WLRCPPPLRQRIHGLHPQFRCLELSRYHRCQFFLSLNTYLVHYFCTHNYLTIRVKLSKIV 104
WL+ P Q P+ R + +R R F + L FC NYLT + V
Sbjct: 62 WLQNEAPAGQEHPSQRPKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAV 121
Query: 103 ILWSNENIFRFFFRH 59
L E + +F++
Sbjct: 122 ALELTERQVKVWFQN 136
>BT028833-1|ABI34214.2| 158|Drosophila melanogaster RT01054p
protein.
Length = 158
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/75 (25%), Positives = 30/75 (40%)
Frame = -3
Query: 283 WLRCPPPLRQRIHGLHPQFRCLELSRYHRCQFFLSLNTYLVHYFCTHNYLTIRVKLSKIV 104
WL+ P Q + + R + +R R F + L FC NYLT + V
Sbjct: 62 WLQNEAPTGQELPSQRSKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAV 121
Query: 103 ILWSNENIFRFFFRH 59
L E + +F++
Sbjct: 122 ALELTERQVKVWFQN 136
>AY118274-1|AAM48303.1| 1443|Drosophila melanogaster AT03867p
protein.
Length = 1443
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 455 PSAPPIALSARSLSSTNI 402
P+ PP++LSAR LSST +
Sbjct: 662 PAGPPLSLSARPLSSTEL 679
>AE014297-3190|AAF56025.1| 158|Drosophila melanogaster CG5264-PA
protein.
Length = 158
Score = 28.3 bits (60), Expect = 8.7
Identities = 19/75 (25%), Positives = 30/75 (40%)
Frame = -3
Query: 283 WLRCPPPLRQRIHGLHPQFRCLELSRYHRCQFFLSLNTYLVHYFCTHNYLTIRVKLSKIV 104
WL+ P Q + + R + +R R F + L FC NYLT + V
Sbjct: 62 WLQNEAPTGQELPSQRSKLRAISSNRKERTAFSKTQLKQLEAEFCYSNYLTRLRRYEIAV 121
Query: 103 ILWSNENIFRFFFRH 59
L E + +F++
Sbjct: 122 ALELTERQVKVWFQN 136
>AE014296-1208|AAF50601.2| 1770|Drosophila melanogaster CG32387-PA,
isoform A protein.
Length = 1770
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 455 PSAPPIALSARSLSSTNI 402
P+ PP++LSAR LSST +
Sbjct: 971 PAGPPLSLSARPLSSTEL 988
>AE014296-1207|ABI31239.1| 1766|Drosophila melanogaster CG32387-PC,
isoform C protein.
Length = 1766
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 455 PSAPPIALSARSLSSTNI 402
P+ PP++LSAR LSST +
Sbjct: 972 PAGPPLSLSARPLSSTEL 989
>AE014296-1206|AAF50600.2| 1765|Drosophila melanogaster CG32387-PB,
isoform B protein.
Length = 1765
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/18 (61%), Positives = 15/18 (83%)
Frame = -2
Query: 455 PSAPPIALSARSLSSTNI 402
P+ PP++LSAR LSST +
Sbjct: 971 PAGPPLSLSARPLSSTEL 988
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,297,413
Number of Sequences: 53049
Number of extensions: 431105
Number of successful extensions: 1559
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1505
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1556
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2517878700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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