Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_P21
(800 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene... 109 2e-23
BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase ... 109 2e-23
Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein p... 106 1e-22
BC045753-1|AAH45753.1| 125|Homo sapiens AFG3L1 protein protein. 46 2e-04
AK097044-1|BAC04933.1| 199|Homo sapiens protein ( Homo sapiens ... 46 2e-04
Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein. 41 0.006
BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (p... 41 0.006
BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein. 41 0.006
AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein. 41 0.006
BC105104-1|AAI05105.1| 597|Homo sapiens unc-93 homolog B1 (C. e... 31 6.4
BC101568-1|AAI01569.1| 597|Homo sapiens unc-93 homolog B1 (C. e... 31 6.4
BC092472-1|AAH92472.1| 597|Homo sapiens unc-93 homolog B1 (C. e... 31 6.4
BC025669-1|AAH25669.1| 505|Homo sapiens UNC93B1 protein protein. 31 6.4
AJ422142-1|CAD19522.1| 497|Homo sapiens UNC-93B protein protein. 31 6.4
AJ271326-1|CAC19791.1| 597|Homo sapiens unc-93 related protein ... 31 6.4
BC033623-1|AAH33623.1| 505|Homo sapiens UNC93B1 protein protein. 30 8.5
>BC065016-1|AAH65016.1| 797|Homo sapiens AFG3 ATPase family gene
3-like 2 (yeast) protein.
Length = 797
Score = 109 bits (261), Expect = 2e-23
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Frame = +3
Query: 186 RYILMDISCSLSAYLLDSVLRQWYEFCKKPPKGFEKYFQPG-SGQKDAKTQEKNXXXXXX 362
R++ S ++ L D ++ + FC +PPKGFEKYF G +G+K ++ +E
Sbjct: 41 RFVTTQARASRNSLLTD-IIAAYQRFCSRPPKGFEKYFPNGKNGKKASEPKEVMGEKKES 99
Query: 363 XXXXXXXXXXXXXDKWNMNMFXXXXXXXXXXXXXXXYEGQDKEKWMMFGAIGIVTLLASV 542
DK+ M F + V
Sbjct: 100 KPAATTRSSGGGGGGGGKRGGKKDDSHWWSRFQKGDIPWDDKDFRMFF--LWTALFWGGV 157
Query: 543 AYFELRYR---EISWRDFVNLYLNKGVVEKLEVINKKWVRVKLQ--GNALXGKVIWFAIG 707
++ L R EI+W+DFVN YL+KGVV++LEV+NK++VRV + G+ +WF IG
Sbjct: 158 MFYLLLKRSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIG 217
Query: 708 SVDSFERNLXNAQIEMSIDPPNFVPVIYXTE 800
SVD+FERNL Q E+ I+ N VPV+Y E
Sbjct: 218 SVDTFERNLETLQQELGIEGENRVPVVYIAE 248
>BC024282-1|AAH24282.1| 812|Homo sapiens Similar to AFG3 ATPase
family gene 3-like 2 (yeast) protein.
Length = 812
Score = 109 bits (261), Expect = 2e-23
Identities = 69/211 (32%), Positives = 101/211 (47%), Gaps = 6/211 (2%)
Frame = +3
Query: 186 RYILMDISCSLSAYLLDSVLRQWYEFCKKPPKGFEKYFQPG-SGQKDAKTQEKNXXXXXX 362
R++ S ++ L D ++ + FC +PPKGFEKYF G +G+K ++ +E
Sbjct: 56 RFVTTQARASRNSLLTD-IIAAYQRFCSRPPKGFEKYFPNGKNGKKASEPKEVMGEKKES 114
Query: 363 XXXXXXXXXXXXXDKWNMNMFXXXXXXXXXXXXXXXYEGQDKEKWMMFGAIGIVTLLASV 542
DK+ M F + V
Sbjct: 115 KPAATTRSSGGGGGGGGKRGGKKDDSHWWSRFQKGDIPWDDKDFRMFF--LWTALFWGGV 172
Query: 543 AYFELRYR---EISWRDFVNLYLNKGVVEKLEVINKKWVRVKLQ--GNALXGKVIWFAIG 707
++ L R EI+W+DFVN YL+KGVV++LEV+NK++VRV + G+ +WF IG
Sbjct: 173 MFYLLLKRSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIG 232
Query: 708 SVDSFERNLXNAQIEMSIDPPNFVPVIYXTE 800
SVD+FERNL Q E+ I+ N VPV+Y E
Sbjct: 233 SVDTFERNLETLQQELGIEGENRVPVVYIAE 263
>Y18314-1|CAB48398.1| 797|Homo sapiens paraplegin-like protein
protein.
Length = 797
Score = 106 bits (254), Expect = 1e-22
Identities = 68/211 (32%), Positives = 100/211 (47%), Gaps = 6/211 (2%)
Frame = +3
Query: 186 RYILMDISCSLSAYLLDSVLRQWYEFCKKPPKGFEKYFQPG-SGQKDAKTQEKNXXXXXX 362
R++ S ++ L D ++ + FC +PPKGF KYF G +G+K ++ +E
Sbjct: 41 RFVTTQARASRNSLLTD-IIAAYQRFCSRPPKGFGKYFPNGKNGKKASEPKEVMGEKKES 99
Query: 363 XXXXXXXXXXXXXDKWNMNMFXXXXXXXXXXXXXXXYEGQDKEKWMMFGAIGIVTLLASV 542
DK+ M F + V
Sbjct: 100 KPAATTRSSGGGGGGGGKRGGKKDDSHWWSRFQKGDIPWDDKDFRMFF--LWTALFWGGV 157
Query: 543 AYFELRYR---EISWRDFVNLYLNKGVVEKLEVINKKWVRVKLQ--GNALXGKVIWFAIG 707
++ L R EI+W+DFVN YL+KGVV++LEV+NK++VRV + G+ +WF IG
Sbjct: 158 MFYLLLKRSGREITWKDFVNNYLSKGVVDRLEVVNKRFVRVTFTPGKTPVDGQYVWFNIG 217
Query: 708 SVDSFERNLXNAQIEMSIDPPNFVPVIYXTE 800
SVD+FERNL Q E+ I+ N VPV+Y E
Sbjct: 218 SVDTFERNLETLQQELGIEGENRVPVVYIAE 248
>BC045753-1|AAH45753.1| 125|Homo sapiens AFG3L1 protein protein.
Length = 125
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +3
Query: 546 YFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVRV 656
YF REI+W+ FV YL +G+V++LEV+NK+ VRV
Sbjct: 54 YFRDPGREITWKHFVQYYLARGLVDRLEVVNKQSVRV 90
>AK097044-1|BAC04933.1| 199|Homo sapiens protein ( Homo sapiens
cDNA FLJ39725 fis, clone SMINT2015294, highly similar to
Mus musculus ATP-dependent zinc metalloprotease (Afg3l1)
mRNA. ).
Length = 199
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/37 (54%), Positives = 28/37 (75%)
Frame = +3
Query: 546 YFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVRV 656
YF REI+W+ FV YL +G+V++LEV+NK+ VRV
Sbjct: 54 YFRDPGREITWKHFVQYYLARGLVDRLEVVNKQSVRV 90
>Y16610-1|CAA76314.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 40.7 bits (91), Expect = 0.006
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = +3
Query: 570 ISWRDFVNLYLNKGVVEKLEVI-NKKWVRVKLQ-GNALXGK-----VIWFAIGSVDSFER 728
ISW DFV+ L KG V++++V+ V V L G + G+ + + ++D FE
Sbjct: 165 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 729 NLXNAQIEMSIDPPNFVPVIY 791
L A+ E++I+ + +PV Y
Sbjct: 225 KLRAAEDELNIEAKDRIPVSY 245
>BC036104-1|AAH36104.1| 795|Homo sapiens spastic paraplegia 7 (pure
and complicated autosomal recessive) protein.
Length = 795
Score = 40.7 bits (91), Expect = 0.006
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = +3
Query: 570 ISWRDFVNLYLNKGVVEKLEVI-NKKWVRVKLQ-GNALXGK-----VIWFAIGSVDSFER 728
ISW DFV+ L KG V++++V+ V V L G + G+ + + ++D FE
Sbjct: 165 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 729 NLXNAQIEMSIDPPNFVPVIY 791
L A+ E++I+ + +PV Y
Sbjct: 225 KLRAAEDELNIEAKDRIPVSY 245
>BC035929-1|AAH35929.1| 732|Homo sapiens SPG7 protein protein.
Length = 732
Score = 40.7 bits (91), Expect = 0.006
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = +3
Query: 570 ISWRDFVNLYLNKGVVEKLEVI-NKKWVRVKLQ-GNALXGK-----VIWFAIGSVDSFER 728
ISW DFV+ L KG V++++V+ V V L G + G+ + + ++D FE
Sbjct: 102 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 161
Query: 729 NLXNAQIEMSIDPPNFVPVIY 791
L A+ E++I+ + +PV Y
Sbjct: 162 KLRAAEDELNIEAKDRIPVSY 182
>AF080525-1|AAD28099.1| 795|Homo sapiens paraplegin protein.
Length = 795
Score = 40.7 bits (91), Expect = 0.006
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Frame = +3
Query: 570 ISWRDFVNLYLNKGVVEKLEVI-NKKWVRVKLQ-GNALXGK-----VIWFAIGSVDSFER 728
ISW DFV+ L KG V++++V+ V V L G + G+ + + ++D FE
Sbjct: 165 ISWNDFVHEMLAKGEVQRVQVVPESDVVEVYLHPGAVVFGRPRLALMYRMQVANIDKFEE 224
Query: 729 NLXNAQIEMSIDPPNFVPVIY 791
L A+ E++I+ + +PV Y
Sbjct: 225 KLRAAEDELNIEAKDRIPVSY 245
>BC105104-1|AAI05105.1| 597|Homo sapiens unc-93 homolog B1 (C.
elegans) protein.
Length = 597
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 492 KWMMFGAIGIVTLLASVAYFELRY 563
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC101568-1|AAI01569.1| 597|Homo sapiens unc-93 homolog B1 (C.
elegans) protein.
Length = 597
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 492 KWMMFGAIGIVTLLASVAYFELRY 563
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC092472-1|AAH92472.1| 597|Homo sapiens unc-93 homolog B1 (C.
elegans) protein.
Length = 597
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 492 KWMMFGAIGIVTLLASVAYFELRY 563
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC025669-1|AAH25669.1| 505|Homo sapiens UNC93B1 protein protein.
Length = 505
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 492 KWMMFGAIGIVTLLASVAYFELRY 563
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>AJ422142-1|CAD19522.1| 497|Homo sapiens UNC-93B protein protein.
Length = 497
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 492 KWMMFGAIGIVTLLASVAYFELRY 563
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>AJ271326-1|CAC19791.1| 597|Homo sapiens unc-93 related protein
protein.
Length = 597
Score = 30.7 bits (66), Expect = 6.4
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +3
Query: 492 KWMMFGAIGIVTLLASVAYFELRY 563
KWMMF A+GI L S Y+E Y
Sbjct: 136 KWMMFLAVGIYALFVSTNYWERYY 159
>BC033623-1|AAH33623.1| 505|Homo sapiens UNC93B1 protein protein.
Length = 505
Score = 30.3 bits (65), Expect = 8.5
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +3
Query: 492 KWMMFGAIGIVTLLASVAYFELRYREI 572
KWMMF A+GI L S Y+E RY +
Sbjct: 136 KWMMFLAVGIYALFVSTNYWE-RYHTL 161
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 95,765,504
Number of Sequences: 237096
Number of extensions: 1654575
Number of successful extensions: 7026
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 6938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7019
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9869080686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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