Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_P21
(800 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg (sp... 90 2e-18
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 30 1.7
U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical pr... 30 2.2
AF040661-14|AAG24220.1| 216|Caenorhabditis elegans Hypothetical... 30 2.2
Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical pr... 29 5.1
Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical pr... 29 5.1
AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein. 29 5.1
AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm transme... 29 5.1
AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aa... 28 6.8
AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin pr... 28 6.8
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 28 8.9
AF125459-13|AAD12833.1| 605|Caenorhabditis elegans Hypothetical... 28 8.9
AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical... 28 8.9
>AC024791-6|AAF60660.2| 782|Caenorhabditis elegans Human spg
(spastic paraplegia)protein 7 protein.
Length = 782
Score = 89.8 bits (213), Expect = 2e-18
Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Frame = +3
Query: 510 AIGIVTLLASVAYFELR-YREISWRDFVNLYLNKGVVEKLEVINKKWVRVKLQGNALXGK 686
A+ + LLA A+ + + YREISW++F + +L G+VE+LEV++K+WVR+ G+
Sbjct: 127 AVSVGILLALYAFMDYQSYREISWKEFYSDFLEAGLVERLEVVDKRWVRIVSSSGKYAGQ 186
Query: 687 VIWFAIGSVDSFERNLXNAQIEMSIDPPNFVPVIYXTE 800
+F IGSVDSFER+L AQ + D +PV+Y +E
Sbjct: 187 TCYFNIGSVDSFERSLGAAQHHLQYDADRQIPVLYKSE 224
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/68 (27%), Positives = 28/68 (41%)
Frame = -2
Query: 724 SNESTLPIANQITFPXNAFP*SFTRTHFLLITSSFSTTPLFKYKLTKSLQLISLYLNSKY 545
S + P+ TFP P T T +TS++ P F+Y T Q+I +K
Sbjct: 119 SKPTPRPMPTVFTFPYTT-PHFTTSTPVPEVTSTYDPRPRFRYTTTTEPQIIKFVKTTKP 177
Query: 544 ATEASNVT 521
T + T
Sbjct: 178 TTTTEDTT 185
>U46753-2|AAA85760.1| 894|Caenorhabditis elegans Hypothetical
protein C34F11.5 protein.
Length = 894
Score = 29.9 bits (64), Expect = 2.2
Identities = 17/75 (22%), Positives = 33/75 (44%)
Frame = +1
Query: 268 KSRLRVLKNTSNRVAVRKTLKLRKKMQVLHLKVPRLHRNRPLHHQINGT*TCSRLLXXXX 447
K + ++ K N + +L+K+ ++ K+ RLHRNR + + +LL
Sbjct: 752 KKKYQLRKGALNMEQKERMRELKKRRRMKKQKIDRLHRNRKIGQILREWRVVRKLLMVKR 811
Query: 448 XXXXXXXXMKAKIKR 492
M+ K+K+
Sbjct: 812 ARRTLKKKMRKKVKQ 826
>AF040661-14|AAG24220.1| 216|Caenorhabditis elegans Hypothetical
protein W10G11.13 protein.
Length = 216
Score = 29.9 bits (64), Expect = 2.2
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 3/30 (10%)
Frame = -2
Query: 307 PGWKYFSKPLGGFLQ---NSYHCLKTESSR 227
PGWK+F++P GG+ N Y K E+ +
Sbjct: 46 PGWKFFNRPSGGWCMKVINEYKGAKAEAEK 75
>Z81473-7|CAB60992.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 515 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 549
>Z81063-8|CAB61013.2| 661|Caenorhabditis elegans Hypothetical
protein C17D12.6 protein.
Length = 661
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 515 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 549
>AF492701-1|AAM49753.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492700-1|AAM49752.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492699-1|AAM49751.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492698-1|AAM49750.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492697-1|AAM49749.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492696-1|AAM49748.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492695-1|AAM49747.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492694-1|AAM49746.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492693-1|AAM49745.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492692-1|AAM49744.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492691-1|AAM49743.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492690-1|AAM49742.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492688-1|AAM49741.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492687-1|AAM49740.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF492686-1|AAM49739.1| 647|Caenorhabditis elegans SPE-9 protein.
Length = 647
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 501 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 535
>AF049327-1|AAC38980.1| 661|Caenorhabditis elegans sperm
transmembrane protein protein.
Length = 661
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = -3
Query: 270 FYRIHTTVLKRNLAGTPTGCNLCPLKCIFDSCECVN 163
F ++HT +NL C++ P + +D C+CVN
Sbjct: 515 FCKVHTNPCYQNLCQNSATCHIDPKQRSYD-CQCVN 549
>AC025715-1|ABJ99062.1| 747|Caenorhabditis elegans Paraplegin aaa
protease familyprotein 1 protein.
Length = 747
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Frame = +3
Query: 489 EKWMMFG--AIGIVTLLASVAYFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVR--- 653
++W+ A GI+ +L+ + +ISW +F+N L G V ++ ++ +K V
Sbjct: 109 KRWLAISLFAYGILFILSPKGAAAVTADKISWSEFINELLPTGQVYRIIILPEKDVAYLY 168
Query: 654 -----VKLQGNALXGKVIWFAIGSVDSFERNLXNAQIEMSIDPPNFVPVIY 791
K + I SV FE + A+ + + P ++ + Y
Sbjct: 169 CYDTGAKNSRGEKLASMYRVGIPSVARFETEVRAAEAALGLPPEHWTQIEY 219
>AB257343-1|BAE96353.1| 747|Caenorhabditis elegans paraplegin
protein.
Length = 747
Score = 28.3 bits (60), Expect = 6.8
Identities = 24/111 (21%), Positives = 47/111 (42%), Gaps = 10/111 (9%)
Frame = +3
Query: 489 EKWMMFG--AIGIVTLLASVAYFELRYREISWRDFVNLYLNKGVVEKLEVINKKWVR--- 653
++W+ A GI+ +L+ + +ISW +F+N L G V ++ ++ +K V
Sbjct: 109 KRWLAISLFAYGILFILSPKGAAAVTADKISWSEFINELLPTGQVYRIIILPEKDVAYLY 168
Query: 654 -----VKLQGNALXGKVIWFAIGSVDSFERNLXNAQIEMSIDPPNFVPVIY 791
K + I SV FE + A+ + + P ++ + Y
Sbjct: 169 CYDTGAKNSRGEKLASMYRVGIPSVARFETEVRAAEAALGLPPEHWTQIEY 219
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical
protein T16G12.5 protein.
Length = 1142
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = -2
Query: 295 YFSKPLGGFLQNSYHCLKTESSRYADRLQLMSIK 194
Y+S+ LGG + + LK+E + +D QL+S++
Sbjct: 246 YYSQILGGLYLDLANLLKSERANCSDEYQLLSLQ 279
>AF125459-13|AAD12833.1| 605|Caenorhabditis elegans Hypothetical
protein Y25C1A.3 protein.
Length = 605
Score = 27.9 bits (59), Expect = 8.9
Identities = 8/13 (61%), Positives = 11/13 (84%)
Frame = -2
Query: 307 PGWKYFSKPLGGF 269
PGWK+F +P GG+
Sbjct: 552 PGWKFFDRPTGGW 564
>AF040661-12|AAG24221.1| 210|Caenorhabditis elegans Hypothetical
protein W10G11.14 protein.
Length = 210
Score = 27.9 bits (59), Expect = 8.9
Identities = 8/13 (61%), Positives = 12/13 (92%)
Frame = -2
Query: 307 PGWKYFSKPLGGF 269
PGWK+F++P GG+
Sbjct: 42 PGWKFFNRPSGGW 54
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,916,858
Number of Sequences: 27780
Number of extensions: 292275
Number of successful extensions: 727
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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