Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_P16
         (848 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_03_0486 + 16463144-16463216,16464058-16464105,16464415-164644...    30   2.7  
10_08_0173 + 15414628-15414890,15415001-15415074,15416322-154164...    29   3.5  
03_06_0375 - 33474860-33474866,33475033-33475100,33475469-334755...    29   4.7  
02_04_0624 + 24538095-24538183,24538429-24538612,24538725-245388...    29   6.2  
05_06_0172 + 26138238-26138474,26138712-26139854                       28   8.2  

>04_03_0486 +
           16463144-16463216,16464058-16464105,16464415-16464467,
           16465429-16465494,16465705-16465779,16466333-16466407,
           16467538-16467608,16467698-16467749,16468461-16468550,
           16469359-16469451,16469590-16469697
          Length = 267

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 17/57 (29%), Positives = 27/57 (47%)
 Frame = -1

Query: 800 GKLWNSVCVKPNRMSXIVFDRIGRRDSETGLQFSLRYALVLSSKDWMPSKRLFMRSF 630
           GK+   +CVKPN+   ++F  +G  D ET          VL  + W  +K +  + F
Sbjct: 211 GKMVKGLCVKPNKGDAVLFWSMG-LDGETDSNSIHGGCPVLEGEKWSATKWMRQKEF 266


>10_08_0173 +
           15414628-15414890,15415001-15415074,15416322-15416401,
           15417186-15417231,15417334-15417368,15417751-15417771,
           15418418-15419133,15419292-15419324,15419517-15419813,
           15420213-15420659,15420738-15420886,15421408-15421697,
           15421774-15421898,15422006-15422156
          Length = 908

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 12/31 (38%), Positives = 21/31 (67%)
 Frame = -3

Query: 711 PPVLVKICIGAFLQRLDAVKEIIHAQLQSTY 619
           PP LV +  G  + R+DAV++ + A++Q+ Y
Sbjct: 51  PPPLVGVPPGVLMARIDAVRDELAAEVQAKY 81


>03_06_0375 -
           33474860-33474866,33475033-33475100,33475469-33475508,
           33476298-33476421,33476906-33476973,33477089-33477155,
           33477461-33477530,33477753-33477803,33477923-33477981,
           33478026-33478056,33478631-33478834
          Length = 262

 Score = 29.1 bits (62), Expect = 4.7
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +2

Query: 2   GRPMSIEIPPRVVCS 46
           GRPMS  +PPRV C+
Sbjct: 195 GRPMSASVPPRVTCT 209


>02_04_0624 +
           24538095-24538183,24538429-24538612,24538725-24538886,
           24538988-24539225,24539301-24539370,24539439-24539530,
           24539799-24539836,24540018-24540039,24540462-24540618,
           24540702-24540753,24542144-24542207,24542279-24542362,
           24543418-24543543,24543622-24543818,24543903-24544091,
           24544186-24544434,24544507-24544556,24544977-24545059,
           24545164-24545449,24545751-24545794,24545878-24546626
          Length = 1074

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
 Frame = -2

Query: 310 LLAKFLFSEYLMGLVEAYLFPVDLAPRRRIISVQHHGNNHRTRG-HFSSTFSRNPVEFGN 134
           LL++FL SE+   L++  L  + +AP + ++  +    N +      S        EF N
Sbjct: 71  LLSRFLSSEWRFNLIKGTLKTIYIAPMKALVQEKLRDWNMKLGSLGISCLEMTGDNEFYN 130

Query: 133 NQHLHDGSLM 104
            + +HD  L+
Sbjct: 131 TKSIHDADLI 140


>05_06_0172 + 26138238-26138474,26138712-26139854
          Length = 459

 Score = 28.3 bits (60), Expect = 8.2
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = +1

Query: 172 KSDPEFDDCSRDAVQKLFDALGPGLPEIGMPPLDPL 279
           K D   DDC+    QK+F   G G     MPP+ P+
Sbjct: 216 KMDLFVDDCAAGEEQKVFQFQGIGTDAPAMPPVLPV 251


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,653,203
Number of Sequences: 37544
Number of extensions: 437564
Number of successful extensions: 1036
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1036
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2362209084
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)