Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_P15
(763 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase ... 24 1.5
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ... 24 1.5
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ... 24 1.5
AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory recept... 24 1.5
EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2 p... 23 2.0
AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein. 23 3.5
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 22 6.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 22 6.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 22 6.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 22 6.1
DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein. 21 8.1
AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory recept... 21 8.1
>AY362543-1|AAQ63455.1| 677|Tribolium castaneum chitin synthase
protein.
Length = 677
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 283 WSWLASLRSWPLRSVHLWKDRSREL 209
W WL L S SVH+W +L
Sbjct: 219 WIWLVWLLSQAWISVHIWSPNCDKL 243
>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
protein.
Length = 1464
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 283 WSWLASLRSWPLRSVHLWKDRSREL 209
W WL L S SVH+W +L
Sbjct: 452 WIWLVWLLSQAWISVHIWSPNCDKL 476
>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
CHS2 protein.
Length = 1464
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -1
Query: 283 WSWLASLRSWPLRSVHLWKDRSREL 209
W WL L S SVH+W +L
Sbjct: 452 WIWLVWLLSQAWISVHIWSPNCDKL 476
>AM292352-1|CAL23164.1| 250|Tribolium castaneum gustatory receptor
candidate 31 protein.
Length = 250
Score = 23.8 bits (49), Expect = 1.5
Identities = 16/56 (28%), Positives = 24/56 (42%)
Frame = -1
Query: 439 WEHSDLSYSNRSEAILFSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWSWL 272
W D+ S A +F + + AR+ ++WK+ R H RL Q S L
Sbjct: 102 WTFIDVFIMLTSTAFVFRLKQLNAKVEMLKNARVKNTALWKQLRYEHYRLYQLSVL 157
>EF117815-1|ABO38438.1| 535|Tribolium castaneum cryptochrome 2
protein.
Length = 535
Score = 23.4 bits (48), Expect = 2.0
Identities = 14/33 (42%), Positives = 15/33 (45%)
Frame = -3
Query: 227 GS*PRTVKPFLTKFAAMNPPMFPRPRKATFLSV 129
G P T FL A M PP P P TF S+
Sbjct: 158 GRAPLTYHQFLAIIACMGPPPQPEP-PVTFNSL 189
Score = 21.8 bits (44), Expect = 6.1
Identities = 11/35 (31%), Positives = 14/35 (40%)
Frame = -2
Query: 330 GQYGNDHVDSINGCSNGVGWRHSVLGRCVQCIFGR 226
GQ G +D+I GW H + V C R
Sbjct: 346 GQTGFPWIDAIMTQLREEGWIHHLARHAVACFLTR 380
>AJ518941-1|CAD57735.1| 456|Tribolium castaneum homothorax protein.
Length = 456
Score = 22.6 bits (46), Expect = 3.5
Identities = 9/30 (30%), Positives = 12/30 (40%)
Frame = -2
Query: 738 QNLRFESHFNAHVHAXSCSHSGDAHQHVIG 649
Q L H N +H +H HV+G
Sbjct: 37 QGLHHSPHLNHAMHPYHANHVNPTANHVMG 66
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -1
Query: 283 WSWLASLRSWPLRSVHLWKDRSREL 209
W WL L S ++H+W + L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -1
Query: 283 WSWLASLRSWPLRSVHLWKDRSREL 209
W WL L S ++H+W + L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
CHS1B protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -1
Query: 283 WSWLASLRSWPLRSVHLWKDRSREL 209
W WL L S ++H+W + L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
CHS1A protein.
Length = 1558
Score = 21.8 bits (44), Expect = 6.1
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -1
Query: 283 WSWLASLRSWPLRSVHLWKDRSREL 209
W WL L S ++H+W + L
Sbjct: 465 WIWLLWLLSQTWITLHIWTPKCERL 489
>DQ342040-1|ABC69932.1| 822|Tribolium castaneum STIP protein.
Length = 822
Score = 21.4 bits (43), Expect = 8.1
Identities = 8/27 (29%), Positives = 14/27 (51%)
Frame = -3
Query: 173 PPMFPRPRKATFLSVLELYARLAAVYK 93
PP P PR +F + +++ +YK
Sbjct: 731 PPPPPPPRVESFAETVRTVSKIPPLYK 757
>AM292371-1|CAL23183.2| 350|Tribolium castaneum gustatory receptor
candidate 50 protein.
Length = 350
Score = 21.4 bits (43), Expect = 8.1
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = -3
Query: 491 GASVNPSPFSKAIGKICLGTFGSIVLESIRSDPFF 387
G S+N S + LG FG VL + FF
Sbjct: 114 GYSINYRRISIFVNLAILGVFGEFVLVFVPDYVFF 148
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 191,869
Number of Sequences: 336
Number of extensions: 4520
Number of successful extensions: 16
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20442493
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -