Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_P11
         (319 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory recept...    23   1.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    23   1.0  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    21   4.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    21   4.1  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    20   5.5  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    19   9.5  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    19   9.5  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    19   9.5  

>AM292330-1|CAL23142.2|  408|Tribolium castaneum gustatory receptor
           candidate 9 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = +3

Query: 87  TLTILLYSISFNSIISSGWATVYVCTHIIKQLRFIYIFTMC 209
           T+  +L ++  + +    WA V++  HI+ Q   + +   C
Sbjct: 140 TVVFMLIALGEHWLSRYSWAKVFLVEHILVQTNKLVLALEC 180


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 1.0
 Identities = 9/41 (21%), Positives = 20/41 (48%)
 Frame = +3

Query: 87  TLTILLYSISFNSIISSGWATVYVCTHIIKQLRFIYIFTMC 209
           T+  +L ++  + +    WA V++  HI+ Q   + +   C
Sbjct: 140 TVVFMLIALGEHWLSRYSWAKVFLVEHILVQTNKLVLALEC 180


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -3

Query: 221 IYLSAHGKYVNKS*LFYDMSTYINSCPTRRNN 126
           + L  HG +   S  +YD   ++  CP ++ N
Sbjct: 197 VTLHWHGVWQRGS-QYYDGVPFVTQCPIQQGN 227


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.6 bits (41), Expect = 4.1
 Identities = 9/32 (28%), Positives = 16/32 (50%)
 Frame = -3

Query: 221 IYLSAHGKYVNKS*LFYDMSTYINSCPTRRNN 126
           + L  HG +   S  +YD   ++  CP ++ N
Sbjct: 197 VTLHWHGVWQRGS-QYYDGVPFVTQCPIQQGN 227


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = +2

Query: 149 CLCMYSYHKTIKIYLHIYHV 208
           CL MY    T  +Y  IY +
Sbjct: 265 CLTMYKLSLTEDLYFAIYEM 284


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 6/7 (85%), Positives = 7/7 (100%)
 Frame = +3

Query: 153 YVCTHII 173
           Y+CTHII
Sbjct: 51  YLCTHII 57


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 42   CESGGTIYFQPSKCYTLTILLYSISFNSIISSGWAT 149
            C   G IY+       L +++YS+ FN + +  W T
Sbjct: 1001 CLKYGVIYYVTVPSMYLLLVIYSV-FN-MNNVSWGT 1034


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 11/36 (30%), Positives = 18/36 (50%)
 Frame = +3

Query: 42   CESGGTIYFQPSKCYTLTILLYSISFNSIISSGWAT 149
            C   G IY+       L +++YS+ FN + +  W T
Sbjct: 1001 CLKYGVIYYVTVPSMYLLLVIYSV-FN-MNNVSWGT 1034


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 58,716
Number of Sequences: 336
Number of extensions: 1014
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)