Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_P09
         (782 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q3F090 Cluster: Putative uncharacterized protein; n=1; ...    38   0.28 
UniRef50_A4M7W7 Cluster: Sensor protein; n=1; Petrotoga mobilis ...    36   1.5  
UniRef50_Q8I5D1 Cluster: Putative uncharacterized protein; n=3; ...    35   2.6  
UniRef50_UPI00000DA87A Cluster: hypothetical protein CT1981; n=1...    34   4.6  
UniRef50_Q7RHP8 Cluster: Putative uncharacterized protein PY0393...    33   6.1  

>UniRef50_Q3F090 Cluster: Putative uncharacterized protein; n=1;
           Bacillus thuringiensis serovar israelensis ATCC
           35646|Rep: Putative uncharacterized protein - Bacillus
           thuringiensis serovar israelensis ATCC 35646
          Length = 269

 Score = 37.9 bits (84), Expect = 0.28
 Identities = 16/48 (33%), Positives = 28/48 (58%)
 Frame = +2

Query: 428 FPHESVKITLQDEAIKNKVRVIMVNFSRCTIPKNKELVKKIYLDVENN 571
           FP    K+ +QD+    KV +  VN+ + +    KEL+K+ + +VEN+
Sbjct: 61  FPDYGFKLLIQDKKDPKKVEIDKVNYQKLSTEDKKELMKQTFTEVENS 108


>UniRef50_A4M7W7 Cluster: Sensor protein; n=1; Petrotoga mobilis
           SJ95|Rep: Sensor protein - Petrotoga mobilis SJ95
          Length = 918

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
 Frame = +2

Query: 443 VKITLQDEAIKNKVRVIMV---NFSRCTIPKNKELVKKIYLDVENNEDLKGKKSVY 601
           ++ TL+ +AIK +   ++V   NF    IP N +L   IY  +E N+++ G  SVY
Sbjct: 223 IENTLEGKAIKERSSYMLVGRENFQNYFIPFNIDLKSSIYSVIEQNDEVYGVLSVY 278


>UniRef50_Q8I5D1 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium|Rep: Putative uncharacterized protein -
           Plasmodium falciparum (isolate 3D7)
          Length = 1135

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 18/61 (29%), Positives = 30/61 (49%)
 Frame = +2

Query: 464 EAIKNKVRVIMVNFSRCTIPKNKELVKKIYLDVENNEDLKGKKSVYMITDVLMAKTIEFR 643
           E ++N   V   N  +  IPKN E + K Y+   NN  + GKK   + +D  + K  + +
Sbjct: 746 ERLRNNNMVNSENNKKMDIPKNDEQIGKSYISSYNNIFVNGKKKYVLKSDNNVGKNYKIK 805

Query: 644 V 646
           +
Sbjct: 806 I 806


>UniRef50_UPI00000DA87A Cluster: hypothetical protein CT1981; n=1;
           Chlorobium tepidum TLS|Rep: hypothetical protein CT1981
           - Chlorobium tepidum TLS
          Length = 415

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +2

Query: 179 DAWPFIRD-EIEIEIGSRQLVCIPHITEADLYKVTSLFVPNEKEINGKNFTPLG 337
           +A PF  D + E   GS  +V +PH  E D      L + +E E  G+NF+ LG
Sbjct: 205 EALPFRVDFDGENITGSNTMVLVPHFLEQDPVGCAGLNISSEIESGGENFSDLG 258


>UniRef50_Q7RHP8 Cluster: Putative uncharacterized protein PY03936;
            n=5; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY03936 - Plasmodium yoelii yoelii
          Length = 1554

 Score = 33.5 bits (73), Expect = 6.1
 Identities = 20/96 (20%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
 Frame = +2

Query: 386  KWLEDGDFQDIDFKFPHESVKITLQDEAIKNKVRVIMVNFSR-CTIPKNKELVKKIYLDV 562
            K +++ + ++++ +   ++ +     E  K  + V+ +N  + C   K +E +K  +++ 
Sbjct: 1021 KKVKNNNIENVETEKIDQNDEYDKSTEIRKKLIDVVQINLGKECFRIKIQENLKIKFINE 1080

Query: 563  ENNEDLKGKKSVYMITDVLMAKTIEFRVTIGSSSRI 670
            + N+  KG  S+YMITD  +    +F   + +  +I
Sbjct: 1081 QMNQKEKGICSIYMITDTNILINFDFNCMLDTLEKI 1116


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 670,462,922
Number of Sequences: 1657284
Number of extensions: 11816752
Number of successful extensions: 27680
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27676
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)