Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_P09
         (782 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces p...    29   0.99 
SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces ...    29   0.99 
SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces pom...    26   5.3  
SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|c...    26   5.3  
SPBC1539.08 |||ADP-ribosylation factor, Arf family|Schizosacchar...    26   5.3  
SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|...    25   9.3  

>SPAC1F8.01 |ght3||hexose transporter Ght3 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 555

 Score = 28.7 bits (61), Expect = 0.99
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 530 KELVKKIYLDVENNEDLKGKKSVYMITDVLMAKTIEFRVTIGSSSRIFHLGNASPLVFG 706
           +EL+   Y      +  KG     +    ++   I F  T G+   I +LG  +PL+FG
Sbjct: 276 RELIGNNYYFYYATQVFKGTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFG 334


>SPBC1683.08 |ght4||hexose transporter Ght4 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 557

 Score = 28.7 bits (61), Expect = 0.99
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = +2

Query: 530 KELVKKIYLDVENNEDLKGKKSVYMITDVLMAKTIEFRVTIGSSSRIFHLGNASPLVFG 706
           +EL+   Y      +  KG     +    ++   I F  T G+   I +LG  +PL+FG
Sbjct: 276 RELIGNNYYFYYATQVFKGTGMTDIFLPAVILGAINFGTTFGALYTIDNLGRRNPLIFG 334


>SPBC713.07c |||vacuolar polyphosphatase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 577

 Score = 26.2 bits (55), Expect = 5.3
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 377 DYVKWLEDGDFQDIDFKFPHESVKITLQDEAIKNKV 484
           D++ W  D    D D  FP    +I   +E + NK+
Sbjct: 125 DFILWTGDNSRHDNDNHFPRTQSEILASNEDLVNKM 160


>SPBC12C2.03c |||FAD binding protein |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 571

 Score = 26.2 bits (55), Expect = 5.3
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -3

Query: 684 LPRWKILEDEPIVTRNSMVFAIS 616
           +PRW  L ++P V+ N + FA++
Sbjct: 318 MPRWYSLSNDPKVSNNVLEFAVT 340


>SPBC1539.08 |||ADP-ribosylation factor, Arf
           family|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 184

 Score = 26.2 bits (55), Expect = 5.3
 Identities = 19/66 (28%), Positives = 31/66 (46%)
 Frame = +2

Query: 449 ITLQDEAIKNKVRVIMVNFSRCTIPKNKELVKKIYLDVENNEDLKGKKSVYMITDVLMAK 628
           I + D A  N++        R  I  ++E+   + L + N +DL G  S   ITDVL   
Sbjct: 93  IFVVDSADSNRISEARQELHR--IISDREMRDCLLLVLANKQDLPGALSPAQITDVLQLD 150

Query: 629 TIEFRV 646
            ++ R+
Sbjct: 151 KLKDRL 156


>SPBC1778.03c |||NADH pyrophosphatase |Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 376

 Score = 25.4 bits (53), Expect = 9.3
 Identities = 11/25 (44%), Positives = 17/25 (68%)
 Frame = +2

Query: 134 RKDVKLENLKSLKLEDAWPFIRDEI 208
           RK+ K++  K L+LED   F R+E+
Sbjct: 309 RKNAKIQRDKDLELEDVRFFSREEV 333


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,889,476
Number of Sequences: 5004
Number of extensions: 54367
Number of successful extensions: 139
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 139
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 379359666
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)