Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_P08
(517 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0E959 Cluster: 50S ribosomal protein L34; n=2; Drosoph... 81 1e-14
UniRef50_UPI00015B4897 Cluster: PREDICTED: similar to conserved ... 77 2e-13
UniRef50_Q16ZW9 Cluster: Putative uncharacterized protein; n=1; ... 74 2e-12
UniRef50_Q7QD26 Cluster: ENSANGP00000011149; n=1; Anopheles gamb... 72 9e-12
UniRef50_UPI00003AF2FA Cluster: PREDICTED: hypothetical protein;... 59 7e-08
UniRef50_UPI0000F2CA69 Cluster: PREDICTED: similar to Mitochondr... 56 4e-07
UniRef50_UPI0000545652 Cluster: PREDICTED: hypothetical protein;... 55 8e-07
UniRef50_Q9BQ48 Cluster: 39S ribosomal protein L34, mitochondria... 53 4e-06
UniRef50_UPI00004F3980 Cluster: PREDICTED: hypothetical protein;... 52 8e-06
UniRef50_Q4SBN9 Cluster: 50S ribosomal protein L34; n=1; Tetraod... 51 1e-05
UniRef50_Q9PPN5 Cluster: 50S ribosomal protein L34; n=232; cellu... 48 1e-04
UniRef50_Q8F9L6 Cluster: 50S ribosomal protein L34; n=45; cellul... 45 0.001
UniRef50_Q9RCA3 Cluster: 50S ribosomal protein L34; n=5; cellula... 44 0.002
UniRef50_Q83FD9 Cluster: 50S ribosomal protein L34; n=10; Bacter... 42 0.008
UniRef50_P66263 Cluster: 50S ribosomal protein L34; n=60; cellul... 42 0.011
UniRef50_Q5KPZ7 Cluster: 50S ribosomal protein L34; n=1; Filobas... 41 0.015
UniRef50_A5DFY5 Cluster: 50S ribosomal protein L34; n=1; Pichia ... 41 0.015
UniRef50_Q97CV7 Cluster: 50S ribosomal protein L34; n=30; cellul... 40 0.025
UniRef50_A4R175 Cluster: 50S ribosomal protein L34; n=1; Magnapo... 40 0.045
UniRef50_O83917 Cluster: 50S ribosomal protein L34; n=62; cellul... 40 0.045
UniRef50_Q6C9A1 Cluster: 50S ribosomal protein L34; n=1; Yarrowi... 39 0.059
UniRef50_Q9KVY1 Cluster: 50S ribosomal protein L34; n=14; cellul... 39 0.078
UniRef50_Q8A1F6 Cluster: 50S ribosomal protein L34; n=11; Bacter... 39 0.078
UniRef50_Q6BWX0 Cluster: 50S ribosomal protein L34; n=1; Debaryo... 38 0.10
UniRef50_Q9P7L9 Cluster: Probable 60S ribosomal protein L34, mit... 38 0.10
UniRef50_Q6NE95 Cluster: 50S ribosomal protein L34; n=8; Bacteri... 38 0.10
UniRef50_Q5P4P1 Cluster: 50S ribosomal protein L34; n=17; Bacter... 38 0.10
UniRef50_Q96U95 Cluster: 50S ribosomal protein L34; n=1; Neurosp... 38 0.14
UniRef50_Q73JL8 Cluster: 50S ribosomal protein L34; n=5; cellula... 38 0.18
UniRef50_Q74ZX7 Cluster: 50S ribosomal protein L34; n=3; cellula... 37 0.31
UniRef50_Q04598 Cluster: 54S ribosomal protein L34, mitochondria... 36 0.55
UniRef50_P68996 Cluster: 50S ribosomal protein L34; n=2; cellula... 36 0.55
UniRef50_A7EL99 Cluster: Putative uncharacterized protein; n=1; ... 36 0.72
UniRef50_A6BGX4 Cluster: 50S ribosomal protein L34; n=3; Bacteri... 35 1.3
UniRef50_Q6FXD5 Cluster: 50S ribosomal protein L34; n=1; Candida... 35 1.3
UniRef50_A7THP6 Cluster: Putative uncharacterized protein; n=1; ... 35 1.3
UniRef50_Q82X98 Cluster: 50S ribosomal protein L34; n=77; cellul... 35 1.3
UniRef50_P78006 Cluster: 50S ribosomal protein L34; n=34; cellul... 35 1.3
UniRef50_A7CT77 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_UPI000023CC09 Cluster: hypothetical protein FG05907.1; ... 33 2.9
UniRef50_A1CH71 Cluster: 50S ribosomal protein L34; n=3; Trichoc... 33 2.9
UniRef50_A5KDX4 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_A2ESN7 Cluster: Putative uncharacterized protein; n=1; ... 32 8.9
UniRef50_A2QI19 Cluster: Similarity: shows similarity to several... 32 8.9
>UniRef50_Q0E959 Cluster: 50S ribosomal protein L34; n=2; Drosophila
melanogaster|Rep: 50S ribosomal protein L34 - Drosophila
melanogaster (Fruit fly)
Length = 81
Score = 81.4 bits (192), Expect = 1e-14
Identities = 33/55 (60%), Positives = 44/55 (80%)
Frame = +3
Query: 237 AFLLSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
AF + ++ KVRC+FP+P EVKR+ HGW+ RMSTP GRR++M R+LKGRH L+H
Sbjct: 27 AFNRAVLKPKVRCHFPKPMEVKRINVHGWNARMSTPEGRRVLMNRILKGRHNLSH 81
>UniRef50_UPI00015B4897 Cluster: PREDICTED: similar to conserved
hypothetical protein; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to conserved hypothetical protein -
Nasonia vitripennis
Length = 73
Score = 77.4 bits (182), Expect = 2e-13
Identities = 32/52 (61%), Positives = 46/52 (88%)
Frame = +3
Query: 246 LSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
L+++RT++R +FPRP+E KRV +HG+ R++TPNGR+I+MRR+LKGRHVL H
Sbjct: 22 LTAVRTRMRYHFPRPDERKRVVQHGYFARLATPNGRKILMRRILKGRHVLGH 73
>UniRef50_Q16ZW9 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 100
Score = 74.1 bits (174), Expect = 2e-12
Identities = 34/50 (68%), Positives = 38/50 (76%)
Frame = +3
Query: 252 SIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
S RT VR FPR E KRVR HGW R+STP GRR +MRR+LKGRHVL+H
Sbjct: 51 SARTVVRNQFPRARETKRVRVHGWWKRLSTPEGRRTLMRRILKGRHVLSH 100
>UniRef50_Q7QD26 Cluster: ENSANGP00000011149; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000011149 - Anopheles gambiae
str. PEST
Length = 90
Score = 71.7 bits (168), Expect = 9e-12
Identities = 34/55 (61%), Positives = 41/55 (74%)
Frame = +3
Query: 237 AFLLSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
A+ L S RT +R FPR E KRVR HGW RMST GRR++MR++LKGRHVL+H
Sbjct: 36 AWGLLSARTVIRNQFPRARETKRVRVHGWWKRMSTLAGRRVLMRKILKGRHVLSH 90
>UniRef50_UPI00003AF2FA Cluster: PREDICTED: hypothetical protein;
n=1; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 118
Score = 58.8 bits (136), Expect = 7e-08
Identities = 36/89 (40%), Positives = 46/89 (51%), Gaps = 1/89 (1%)
Frame = +3
Query: 138 IMSGLISTILQPLKLIRQSSIYTGVSSSLVRP-DAFLLSSIRTKVRCYFPRPNEVKRVRR 314
+ S + T + L S TG S P ++ IRTK R +PN KR R
Sbjct: 30 LRSASVLTYCRELPFSHLSLKPTGTIPSFPSPVPSWSHQQIRTKARGNEYQPNNRKRKRT 89
Query: 315 HGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
HGW R+STP G +I+RR+LKGR LTH
Sbjct: 90 HGWIKRISTPAGIEVILRRMLKGRKSLTH 118
>UniRef50_UPI0000F2CA69 Cluster: PREDICTED: similar to Mitochondrial
ribosomal protein L34; n=1; Monodelphis domestica|Rep:
PREDICTED: similar to Mitochondrial ribosomal protein
L34 - Monodelphis domestica
Length = 141
Score = 56.4 bits (130), Expect = 4e-07
Identities = 24/49 (48%), Positives = 35/49 (71%)
Frame = +3
Query: 255 IRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
+R K R +P+ +KR R+HGW R+STP G ++I+RR+LKGR L+H
Sbjct: 93 VRPKARGNEYQPSNIKRKRKHGWIRRLSTPGGIQVILRRMLKGRKSLSH 141
>UniRef50_UPI0000545652 Cluster: PREDICTED: hypothetical protein;
n=1; Danio rerio|Rep: PREDICTED: hypothetical protein -
Danio rerio
Length = 121
Score = 55.2 bits (127), Expect = 8e-07
Identities = 31/87 (35%), Positives = 47/87 (54%)
Frame = +3
Query: 141 MSGLISTILQPLKLIRQSSIYTGVSSSLVRPDAFLLSSIRTKVRCYFPRPNEVKRVRRHG 320
+S ++S I Q ++ V + +P + +RT R +P+ +KR R HG
Sbjct: 36 LSSVLSRSRPEQNSILQGTLNPKVEGAFQQP-LWNHQQVRTVKRGTEYQPSNIKRKRTHG 94
Query: 321 WDFRMSTPNGRRIIMRRLLKGRHVLTH 401
W R+STP G +I+RR+LKGR LTH
Sbjct: 95 WIKRISTPGGIEVILRRMLKGRKSLTH 121
>UniRef50_Q9BQ48 Cluster: 39S ribosomal protein L34, mitochondrial
precursor; n=10; Eutheria|Rep: 39S ribosomal protein
L34, mitochondrial precursor - Homo sapiens (Human)
Length = 92
Score = 52.8 bits (121), Expect = 4e-06
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 3/60 (5%)
Frame = +3
Query: 231 PDAFLLSS---IRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
PDA+ L + R K R +P+ +KR +HGW R+STP G ++I+RR+LKGR L+H
Sbjct: 33 PDAWGLPTPQQARGKARGNEYQPSNIKRKNKHGWVRRLSTPAGVQVILRRMLKGRKSLSH 92
>UniRef50_UPI00004F3980 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 96
Score = 52.0 bits (119), Expect = 8e-06
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +3
Query: 243 LLSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
++ R + R +P+ +KR +HGW R+STPNG ++I+RR+ KGR L+H
Sbjct: 44 VIQQTRGRTRGNEYQPSNIKRKNKHGWIRRLSTPNGVQVILRRMHKGRKSLSH 96
>UniRef50_Q4SBN9 Cluster: 50S ribosomal protein L34; n=1; Tetraodon
nigroviridis|Rep: 50S ribosomal protein L34 - Tetraodon
nigroviridis (Green puffer)
Length = 118
Score = 51.2 bits (117), Expect = 1e-05
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +3
Query: 216 SSLVRPDAFLLSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVL 395
S + + A+ +RT+ R +P +KR R HGW R+S+ G +++RR+LKGR L
Sbjct: 57 SGVFQQPAWQYQQVRTRKRGTEYQPKNIKRKRTHGWIKRLSSKGGIEVLLRRMLKGRKSL 116
Query: 396 TH 401
+H
Sbjct: 117 SH 118
>UniRef50_Q9PPN5 Cluster: 50S ribosomal protein L34; n=232; cellular
organisms|Rep: 50S ribosomal protein L34 - Ureaplasma
parvum (Ureaplasma urealyticum biotype 1)
Length = 48
Score = 48.0 bits (109), Expect = 1e-04
Identities = 21/38 (55%), Positives = 26/38 (68%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+PN KR + HG+ RM T NGR ++ RR LKGRH LT
Sbjct: 6 QPNNRKRAKVHGFRARMKTKNGRNVLARRRLKGRHSLT 43
>UniRef50_Q8F9L6 Cluster: 50S ribosomal protein L34; n=45; cellular
organisms|Rep: 50S ribosomal protein L34 - Leptospira
interrogans
Length = 53
Score = 44.8 bits (101), Expect = 0.001
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+P+ VKR R HG+ RM+T GR+++ RR KGR+ LT
Sbjct: 6 QPSRVKRARTHGFRARMATAGGRKVLSRRRKKGRYKLT 43
>UniRef50_Q9RCA3 Cluster: 50S ribosomal protein L34; n=5; cellular
organisms|Rep: 50S ribosomal protein L34 - Bacillus
halodurans
Length = 45
Score = 44.4 bits (100), Expect = 0.002
Identities = 20/38 (52%), Positives = 27/38 (71%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+PN KR + HG+ RMST NGR+++ RR KGR VL+
Sbjct: 7 QPNNRKRKKVHGFRARMSTKNGRKVLARRRKKGRKVLS 44
>UniRef50_Q83FD9 Cluster: 50S ribosomal protein L34; n=10;
Bacteria|Rep: 50S ribosomal protein L34 - Tropheryma
whipplei (strain Twist) (Whipple's bacillus)
Length = 45
Score = 41.9 bits (94), Expect = 0.008
Identities = 20/38 (52%), Positives = 26/38 (68%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+PN+ KR++ HG+ RMST +GRRII R K R LT
Sbjct: 7 QPNKRKRLKTHGFRSRMSTASGRRIISCRRRKNRETLT 44
>UniRef50_P66263 Cluster: 50S ribosomal protein L34; n=60; cellular
organisms|Rep: 50S ribosomal protein L34 - Xylella
fastidiosa
Length = 46
Score = 41.5 bits (93), Expect = 0.011
Identities = 19/38 (50%), Positives = 27/38 (71%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+P+ +KR R HG+ RMST +GR+I+ RR KGR L+
Sbjct: 8 QPSNLKRKRDHGFRARMSTADGRKILARRRAKGRKRLS 45
>UniRef50_Q5KPZ7 Cluster: 50S ribosomal protein L34; n=1;
Filobasidiella neoformans|Rep: 50S ribosomal protein L34
- Cryptococcus neoformans (Filobasidiella neoformans)
Length = 129
Score = 41.1 bits (92), Expect = 0.015
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Frame = +3
Query: 246 LSSIRTKVRCYFPRPNEVKRVRRHGWDFRMST-PNGRRIIMRRLLKGRHVLTH 401
L ++R F +P++ KR +HG+ R+ NGR+ ++RRLLKGR L+H
Sbjct: 77 LGALRHVAMGAFYQPSQRKRKNKHGFLSRLKGGKNGRKTLLRRLLKGRKFLSH 129
>UniRef50_A5DFY5 Cluster: 50S ribosomal protein L34; n=1; Pichia
guilliermondii|Rep: 50S ribosomal protein L34 - Pichia
guilliermondii (Yeast) (Candida guilliermondii)
Length = 111
Score = 41.1 bits (92), Expect = 0.015
Identities = 22/48 (45%), Positives = 29/48 (60%)
Frame = +3
Query: 258 RTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
R K R +P+ +KR R G+ R+ T NGR+I+ RR KGR LTH
Sbjct: 64 RFKSRGNTYQPSTLKRKRTFGFLARLRTRNGRKILARRKAKGRWYLTH 111
>UniRef50_Q97CV7 Cluster: 50S ribosomal protein L34; n=30; cellular
organisms|Rep: 50S ribosomal protein L34 - Clostridium
acetobutylicum
Length = 44
Score = 40.3 bits (90), Expect = 0.025
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+P + +R + HG+ RMST +GR+++ RR LKGR LT
Sbjct: 6 QPKKKQRKKEHGFRKRMSTLSGRKVLKRRRLKGRKRLT 43
>UniRef50_A4R175 Cluster: 50S ribosomal protein L34; n=1;
Magnaporthe grisea|Rep: 50S ribosomal protein L34 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 145
Score = 39.5 bits (88), Expect = 0.045
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +3
Query: 246 LSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
L IR R R + +KR R+HG+ + T GR+++ RR KGR LT
Sbjct: 94 LGQIRCGPRPTTARTSRLKRARKHGFLVKTRTAKGRKMLARRQAKGRKTLT 144
>UniRef50_O83917 Cluster: 50S ribosomal protein L34; n=62; cellular
organisms|Rep: 50S ribosomal protein L34 - Treponema
pallidum
Length = 51
Score = 39.5 bits (88), Expect = 0.045
Identities = 19/38 (50%), Positives = 25/38 (65%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+P+ KRVR+ G+ RM+T GR I+ RR KGR LT
Sbjct: 6 QPSRRKRVRKFGFRARMATRGGRAILRRRRAKGRRKLT 43
>UniRef50_Q6C9A1 Cluster: 50S ribosomal protein L34; n=1; Yarrowia
lipolytica|Rep: 50S ribosomal protein L34 - Yarrowia
lipolytica (Candida lipolytica)
Length = 88
Score = 39.1 bits (87), Expect = 0.059
Identities = 27/70 (38%), Positives = 38/70 (54%)
Frame = +3
Query: 192 SSIYTGVSSSLVRPDAFLLSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRR 371
S++ G +++L F +S R VR +P+ KR R G+ R + GR+II RR
Sbjct: 19 SALAQGSTATLPFLTPFSGASQRRYVRGIDYQPSVRKRKRSLGFLARSRSRTGRKIIKRR 78
Query: 372 LLKGRHVLTH 401
LKGR LTH
Sbjct: 79 TLKGRWFLTH 88
>UniRef50_Q9KVY1 Cluster: 50S ribosomal protein L34; n=14; cellular
organisms|Rep: 50S ribosomal protein L34 - Vibrio
cholerae
Length = 45
Score = 38.7 bits (86), Expect = 0.078
Identities = 17/38 (44%), Positives = 26/38 (68%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+P+ +KR R HG+ RM+T NGR+++ R KGR L+
Sbjct: 7 QPSVLKRKRTHGFRARMATANGRKVLNARRAKGRKRLS 44
>UniRef50_Q8A1F6 Cluster: 50S ribosomal protein L34; n=11;
Bacteria|Rep: 50S ribosomal protein L34 - Bacteroides
thetaiotaomicron
Length = 53
Score = 38.7 bits (86), Expect = 0.078
Identities = 17/38 (44%), Positives = 25/38 (65%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+P+ KR +HG+ RM++ NGRR++ R KGR LT
Sbjct: 6 QPSNRKRKNKHGFRERMASANGRRVLAARRAKGRKKLT 43
>UniRef50_Q6BWX0 Cluster: 50S ribosomal protein L34; n=1;
Debaryomyces hansenii|Rep: 50S ribosomal protein L34 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 122
Score = 38.3 bits (85), Expect = 0.10
Identities = 20/48 (41%), Positives = 29/48 (60%)
Frame = +3
Query: 258 RTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
R K R +P+ +KR R G+ R+ + NGR+I+ RR KGR L+H
Sbjct: 75 RFKSRGNSYQPSTLKRKRTFGFLARLRSKNGRKILSRRKAKGRWYLSH 122
>UniRef50_Q9P7L9 Cluster: Probable 60S ribosomal protein L34,
mitochondrial precursor; n=1; Schizosaccharomyces
pombe|Rep: Probable 60S ribosomal protein L34,
mitochondrial precursor - Schizosaccharomyces pombe
(Fission yeast)
Length = 108
Score = 38.3 bits (85), Expect = 0.10
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
+P+ KR R+HG+ R+ + NGRR++ R KGR L+H
Sbjct: 70 QPSNRKRKRKHGFLSRIRSVNGRRVLRDRRQKGRMYLSH 108
>UniRef50_Q6NE95 Cluster: 50S ribosomal protein L34; n=8;
Bacteria|Rep: 50S ribosomal protein L34 -
Corynebacterium diphtheriae
Length = 47
Score = 38.3 bits (85), Expect = 0.10
Identities = 18/38 (47%), Positives = 23/38 (60%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+PN +R R+HG+ RM T GR I+ R KGR LT
Sbjct: 9 QPNNRRRARKHGFRIRMRTRAGRAIVAARRNKGRKSLT 46
>UniRef50_Q5P4P1 Cluster: 50S ribosomal protein L34; n=17;
Bacteria|Rep: 50S ribosomal protein L34 - Azoarcus sp.
(strain EbN1) (Aromatoleum aromaticum (strain EbN1))
Length = 44
Score = 38.3 bits (85), Expect = 0.10
Identities = 18/37 (48%), Positives = 23/37 (62%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVL 395
+P+ V+R R HG+ RM T GR +I R KGRH L
Sbjct: 6 QPSVVRRKRTHGFLVRMKTRGGRAVIRARRAKGRHRL 42
>UniRef50_Q96U95 Cluster: 50S ribosomal protein L34; n=1; Neurospora
crassa|Rep: 50S ribosomal protein L34 - Neurospora
crassa
Length = 140
Score = 37.9 bits (84), Expect = 0.14
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 5/52 (9%)
Frame = +3
Query: 246 LSSIRTKVRCYFPRPN-----EVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 386
LS + +++RC PRP + + RRHG+ R+ T NG++ + RRL KGR
Sbjct: 85 LSGLGSQIRCG-PRPTMSGATRLVQKRRHGFLSRVKTKNGQKTLKRRLAKGR 135
>UniRef50_Q73JL8 Cluster: 50S ribosomal protein L34; n=5; cellular
organisms|Rep: 50S ribosomal protein L34 - Treponema
denticola
Length = 51
Score = 37.5 bits (83), Expect = 0.18
Identities = 17/38 (44%), Positives = 24/38 (63%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+P++ KRVRR G+ M T GR ++ RR KGR L+
Sbjct: 6 QPSKTKRVRRFGFRALMKTKGGRAVLSRRRAKGRRKLS 43
>UniRef50_Q74ZX7 Cluster: 50S ribosomal protein L34; n=3; cellular
organisms|Rep: 50S ribosomal protein L34 - Ashbya
gossypii (Yeast) (Eremothecium gossypii)
Length = 130
Score = 36.7 bits (81), Expect = 0.31
Identities = 22/52 (42%), Positives = 29/52 (55%)
Frame = +3
Query: 246 LSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
L+ R K R +P+ +KR RR G+ R + GR I+ RR KGR LTH
Sbjct: 79 LTQKRWKSRGNTYQPSTLKRKRRVGFLARARSRTGRNILKRRREKGRWYLTH 130
>UniRef50_Q04598 Cluster: 54S ribosomal protein L34, mitochondrial
precursor; n=2; Saccharomyces cerevisiae|Rep: 54S
ribosomal protein L34, mitochondrial precursor -
Saccharomyces cerevisiae (Baker's yeast)
Length = 105
Score = 35.9 bits (79), Expect = 0.55
Identities = 20/53 (37%), Positives = 29/53 (54%)
Frame = +3
Query: 243 LLSSIRTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
L+ R K R +P+ +KR R G+ R + G +I+ RR LKGR L+H
Sbjct: 53 LIGQRRWKSRGNTYQPSTLKRKRTFGFLARAKSKQGSKILKRRKLKGRWFLSH 105
>UniRef50_P68996 Cluster: 50S ribosomal protein L34; n=2; cellular
organisms|Rep: 50S ribosomal protein L34 - Agrobacterium
tumefaciens (strain C58 / ATCC 33970)
Length = 45
Score = 35.9 bits (79), Expect = 0.55
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGR 386
+P+++ R RRHG+ RM+T GR+++ R +GR
Sbjct: 7 QPSKLVRKRRHGFRARMATAGGRKVLAARRARGR 40
>UniRef50_A7EL99 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 126
Score = 35.5 bits (78), Expect = 0.72
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 4/51 (7%)
Frame = +3
Query: 261 TKVRCYFPR----PNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
T+VRC PR P+ R RRHG+ R+ T GR + RR K R L+H
Sbjct: 77 TQVRCG-PRNTFSPSHFVRKRRHGFLSRIKTRKGRATLQRRKSKKRSTLSH 126
>UniRef50_A6BGX4 Cluster: 50S ribosomal protein L34; n=3;
Bacteria|Rep: 50S ribosomal protein L34 - Dorea
longicatena DSM 13814
Length = 61
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+P + +R + HG+ RMST GR+++ R KGR L+
Sbjct: 23 QPKKRQRAKVHGFRSRMSTAGGRKVLAARRAKGRKKLS 60
>UniRef50_Q6FXD5 Cluster: 50S ribosomal protein L34; n=1; Candida
glabrata|Rep: 50S ribosomal protein L34 - Candida
glabrata (Yeast) (Torulopsis glabrata)
Length = 124
Score = 34.7 bits (76), Expect = 1.3
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +3
Query: 258 RTKVRCYFPRPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
R K R +P+ +KR R+ G+ RM+ +II RR KGR LTH
Sbjct: 77 RWKSRGNTYQPSTLKRKRKFGFLARMTNKRTAKIIKRRKEKGRWYLTH 124
>UniRef50_A7THP6 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 112
Score = 34.7 bits (76), Expect = 1.3
Identities = 24/94 (25%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Frame = +3
Query: 126 VTVNIMSGLISTILQPLKLIRQSSIYTGVSSSLVRPDAFLLSSI--RTKVRCYFPRPNEV 299
+T + + S+I +P + ++ G +++ L + R K R +P+ +
Sbjct: 19 LTSGMNRSISSSIFRPFAGLNSVGLFPGTATNTFGSAITGLLGLQRRWKSRGNTYQPSTL 78
Query: 300 KRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLTH 401
KR R+ G+ R + +G +I+ RR KGR L+H
Sbjct: 79 KRKRKFGFLARARSRSGSKILERRKAKGRWYLSH 112
>UniRef50_Q82X98 Cluster: 50S ribosomal protein L34; n=77; cellular
organisms|Rep: 50S ribosomal protein L34 - Nitrosomonas
europaea
Length = 44
Score = 34.7 bits (76), Expect = 1.3
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+P+ + R R HG+ RM T GR +I R KGR L+
Sbjct: 6 QPSVISRKRTHGFRVRMKTRGGRAVIRARRAKGRAKLS 43
>UniRef50_P78006 Cluster: 50S ribosomal protein L34; n=34; cellular
organisms|Rep: 50S ribosomal protein L34 - Mycoplasma
pneumoniae
Length = 48
Score = 34.7 bits (76), Expect = 1.3
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 285 RPNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
+P+++KR + HG+ RM+T +GR+++ R K R LT
Sbjct: 6 QPSKLKRAKTHGFLARMATASGRKVLKLRRKKQRAQLT 43
>UniRef50_A7CT77 Cluster: Putative uncharacterized protein; n=1;
Opitutaceae bacterium TAV2|Rep: Putative uncharacterized
protein - Opitutaceae bacterium TAV2
Length = 218
Score = 33.9 bits (74), Expect = 2.2
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +3
Query: 108 FVSVEKVTVNIMSGLISTILQPLKLIRQSSIYTGVSSSLVRPDAFLLSSIRTKVRCYFPR 287
F +E +TV ++ G+++ I+ P+ + + S T S +R A + R + R FP+
Sbjct: 16 FTLIELLTVIVIIGILAAIIIPVTIKVRESAKTARCRSNIRQIALYMLMYRDENRNKFPK 75
Query: 288 PN 293
PN
Sbjct: 76 PN 77
>UniRef50_UPI000023CC09 Cluster: hypothetical protein FG05907.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG05907.1 - Gibberella zeae PH-1
Length = 125
Score = 33.5 bits (73), Expect = 2.9
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = +3
Query: 309 RRHGWDFRMSTPNGRRIIMRRLLKGR 386
RRHG+ R + GRRI++RR +KGR
Sbjct: 95 RRHGFLVRKRSKTGRRILLRRKIKGR 120
>UniRef50_A1CH71 Cluster: 50S ribosomal protein L34; n=3;
Trichocomaceae|Rep: 50S ribosomal protein L34 -
Aspergillus clavatus
Length = 131
Score = 33.5 bits (73), Expect = 2.9
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 288 PNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
P+ + RRHG+ R+ T GR+++M R KGR L+
Sbjct: 94 PSRRVQKRRHGFLSRLRTRGGRKVLMHRRAKGRKSLS 130
>UniRef50_A5KDX4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 730
Score = 32.3 bits (70), Expect = 6.8
Identities = 23/65 (35%), Positives = 35/65 (53%)
Frame = +3
Query: 120 EKVTVNIMSGLISTILQPLKLIRQSSIYTGVSSSLVRPDAFLLSSIRTKVRCYFPRPNEV 299
E+ VN+ S I ILQ KL +Q + +++ F+L R KVR +F PN V
Sbjct: 542 EEAKVNLRSNSIDEILQHRKLEQQKRFLKNIHQNVLH--MFILDFER-KVRTFFSLPN-V 597
Query: 300 KRVRR 314
+R++R
Sbjct: 598 ERLKR 602
>UniRef50_A2ESN7 Cluster: Putative uncharacterized protein; n=1;
Trichomonas vaginalis G3|Rep: Putative uncharacterized
protein - Trichomonas vaginalis G3
Length = 486
Score = 31.9 bits (69), Expect = 8.9
Identities = 16/41 (39%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 140 HVRTNFNNPPTPKTH*AIINLHRSELEFSE--TRCVFVVLN 256
HV+ NFN P PK H + L + EF+E RC+ + L+
Sbjct: 261 HVKINFNMTPDPKIHKMLFKLAIAFPEFTECTKRCIIIRLD 301
>UniRef50_A2QI19 Cluster: Similarity: shows similarity to several
undescribed fungal ribosomal protein L34. precursor;
n=2; Aspergillus|Rep: Similarity: shows similarity to
several undescribed fungal ribosomal protein L34.
precursor - Aspergillus niger
Length = 141
Score = 31.9 bits (69), Expect = 8.9
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 288 PNEVKRVRRHGWDFRMSTPNGRRIIMRRLLKGRHVLT 398
P+ + RRHG+ R+ + GR+I++RR +GR L+
Sbjct: 104 PSRRVQKRRHGFLARLRSRGGRKILLRRRARGRKSLS 140
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 385,479,294
Number of Sequences: 1657284
Number of extensions: 6721487
Number of successful extensions: 13258
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 13042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13256
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 31782822356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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