Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_O18
         (302 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_05_0100 - 20779387-20779641,20779824-20780629,20780757-207810...    26   6.5  

>03_05_0100 -
           20779387-20779641,20779824-20780629,20780757-20781011,
           20781107-20781221,20781301-20781353,20781517-20781777,
           20782804-20782854,20783081-20783329,20784765-20784990,
           20785968-20786132
          Length = 811

 Score = 25.8 bits (54), Expect = 6.5
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +3

Query: 54  ICHLQTLNTFNRNVLLHFS 110
           I HLQTLN F R  +LH S
Sbjct: 403 ISHLQTLNCFPRVKILHTS 421


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,333,606
Number of Sequences: 37544
Number of extensions: 43800
Number of successful extensions: 38
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 14,793,348
effective HSP length: 71
effective length of database: 12,127,724
effective search space used: 351703996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)