Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_O17
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    23   2.2  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    22   5.0  
DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory pro...    22   6.6  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    22   6.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   6.6  
AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A prot...    22   6.6  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   6.6  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.7  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 690 CSGDTKTPKCTKKCESGYDVN 752
           C+GD + P C + C   + V+
Sbjct: 553 CNGDNRPPDCGQNCMCTHQVD 573


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 5/24 (20%), Positives = 15/24 (62%)
 Frame = -1

Query: 791 SIYMFSVLFVLFVINVVSRFAFFC 720
           ++Y  +++F+ F+I ++     +C
Sbjct: 235 ALYFLTIIFLFFIIPLIILLILYC 258


>DQ855499-1|ABH88186.1|  124|Tribolium castaneum chemosensory
           protein 13 protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = -3

Query: 681 CCRVRDVHTEGSRKV 637
           C +  D H EG RKV
Sbjct: 70  CAKCNDKHKEGIRKV 84


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 438 AVEAMTDRVCTYSNG 482
           AV+A TD+ C Y+ G
Sbjct: 42  AVDAATDKSCRYTAG 56


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 438 AVEAMTDRVCTYSNG 482
           AV+A TD+ C Y+ G
Sbjct: 101 AVDAATDKSCRYTAG 115


>AF017414-2|AAB70261.1|  150|Tribolium castaneum abdominal-A
           protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 438 AVEAMTDRVCTYSNG 482
           AV+A TD+ C Y+ G
Sbjct: 42  AVDAATDKSCRYTAG 56


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 438 AVEAMTDRVCTYSNG 482
           AV+A TD+ C Y+ G
Sbjct: 101 AVDAATDKSCRYTAG 115


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +1

Query: 46  TRPFVKKSVITEKQKKCLFRVRRMLRWCAFLQRPKTYRIHSPMNSSTR 189
           T+P   K   T      L  + R      +L RP+  +I   +N S R
Sbjct: 83  TKPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSER 130


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 13/48 (27%), Positives = 19/48 (39%)
 Frame = +1

Query: 46  TRPFVKKSVITEKQKKCLFRVRRMLRWCAFLQRPKTYRIHSPMNSSTR 189
           T+P   K   T      L  + R      +L RP+  +I   +N S R
Sbjct: 74  TKPTAGKRARTAYTSAQLVELEREFHHGKYLSRPRRIQIAENLNLSER 121


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,443
Number of Sequences: 336
Number of extensions: 4601
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)