Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_O14
         (769 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    23   3.6  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    23   3.6  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    22   6.2  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    22   6.2  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    21   8.2  

>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = +2

Query: 2   GRPLAI--LLAXG--VXVKSIPCLFTWLAPLS 85
           G PL I  LL  G  + V SIP  F WL+ LS
Sbjct: 561 GPPLVIPFLLFGGFFLNVSSIPIYFKWLSFLS 592


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = +2

Query: 2   GRPLAI--LLAXG--VXVKSIPCLFTWLAPLS 85
           G PL I  LL  G  + V SIP  F WL+ LS
Sbjct: 561 GPPLVIPFLLFGGFFLNVSSIPIYFKWLSFLS 592


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 6/25 (24%), Positives = 16/25 (64%)
 Frame = -1

Query: 397 PNLVYYMIVSSLSVSEYLNSICHNW 323
           P+L+ ++  S+   + ++NS+ + W
Sbjct: 439 PSLIIHVSTSAYVATVWINSVINRW 463


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 589 VIFSFRVIFLSCHFLIFLCTRFSTI 515
           ++F    IF + H L  LC  + T+
Sbjct: 180 LLFCCAFIFFNMHLLFLLCLDYFTL 204


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -2

Query: 747 FMSLSVAWRLPDTLPDR 697
           F  L +AW  P+T P +
Sbjct: 140 FDGLDLAWEFPETKPKK 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,682
Number of Sequences: 336
Number of extensions: 3799
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20650031
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)