Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_O12
         (802 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    29   0.057
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    24   1.6  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    23   2.8  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   6.5  

>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 28.7 bits (61), Expect = 0.057
 Identities = 15/46 (32%), Positives = 23/46 (50%)
 Frame = -3

Query: 566 PKCL*FFFFSWAYFHVLLTPFSYFGNRLLSTRITNKLGVMRQKVVT 429
           P+ L F F SW   +  LT F Y     LS     K+G++  +++T
Sbjct: 50  PEKLHFTFKSWKVLYTSLTSFGYLFCASLSFYKAFKIGILLNQLIT 95


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.8 bits (49), Expect = 1.6
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 1/55 (1%)
 Frame = -2

Query: 342 IQFCFPCLFQYKNFYNDVGLLFWCFFIVTIKHEQVNCKILRQITYYFVKC-YTFY 181
           I F    LF   + Y  V LLF+C FI+   H  + C       +  + C Y FY
Sbjct: 64  ITFNVHLLFLLCSGYFTVHLLFYCPFIIFTVHFLL-CTYYFYYAFIILLCVYYFY 117


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = -2

Query: 183 YVGKVENFVYCYSYKHRSILYY 118
           Y    ENF+ C   K  S +YY
Sbjct: 335 YADLNENFLQCQDEKFESFVYY 356


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.5
 Identities = 12/45 (26%), Positives = 19/45 (42%)
 Frame = -2

Query: 225 LRQITYYFVKCYTFYVGKVENFVYCYSYKHRSILYYSLWFKRQNI 91
           +R   YY  + +T+YV     F+  +S       + SL     NI
Sbjct: 141 VRMFQYYIGRSFTYYVCNTTIFLIFHSVLPIKRFFTSLGIAFDNI 185


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,962
Number of Sequences: 336
Number of extensions: 4775
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21791490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)