Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_O12
         (802 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC3A12.18 |zwf1|SPAC9.01|glucose-6-phosphate 1-dehydrogenase |...   116   4e-27
SPCC794.01c |||glucose-6-phosphate 1-dehydrogenase |Schizosaccha...    96   4e-21
SPAC3C7.13c |||glucose-6-phosphate 1-dehydrogenase |Schizosaccha...    92   7e-20
SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|...    27   3.1  
SPAC1039.01 |||amino acid permease, unknown 5|Schizosaccharomyce...    27   3.1  
SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces ...    26   7.2  
SPCC126.09 |||vacuolar membrane zinc transporter |Schizosaccharo...    26   7.2  
SPBC27B12.13 |tom40|SPBC8D2.22|mitochondrial TOM complex subunit...    25   9.5  
SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|...    25   9.5  
SPBC23G7.08c |rga7||GTPase activating protein Rga7|Schizosacchar...    25   9.5  
SPCC736.02 |||sequence orphan|Schizosaccharomyces pombe|chr 3|||...    25   9.5  

>SPAC3A12.18 |zwf1|SPAC9.01|glucose-6-phosphate 1-dehydrogenase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 500

 Score =  116 bits (279), Expect = 4e-27
 Identities = 61/146 (41%), Positives = 86/146 (58%), Gaps = 4/146 (2%)
 Frame = +3

Query: 363 VLLGASGDLARKKIYPTIWYLYRDNLLPHNTKFIGYARTKQSVSEVRERCQKYMKIRPGE 542
           V+ GASGDL++KK +P ++ L+ +  LP + + +GYAR+K    +  +R  + +KI   +
Sbjct: 15  VVFGASGDLSKKKTFPALFSLFSEGRLPKDIRIVGYARSKIEHEDFLDRITQNIKIDEED 74

Query: 543 ---EEKLETFWNANNYVAGSYDGRIDYEFLNRIISNHEKGPIA-NRIFYLAVPPTVFEDV 710
              +EKLE F    +Y  GSYD   D+E LN  +   E      NRIFYLA+PP VF  V
Sbjct: 75  SQAKEKLEEFKKRCSYYRGSYDKPEDFEGLNSHLCEREGDRSTHNRIFYLALPPDVFVSV 134

Query: 711 TVNIKNACTSSKGFTRVIIEKPFGRD 788
             N+K  C   KG  R++IEKPFG D
Sbjct: 135 ATNLKKKCVPEKGIARLVIEKPFGVD 160


>SPCC794.01c |||glucose-6-phosphate 1-dehydrogenase
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 475

 Score = 96.3 bits (229), Expect = 4e-21
 Identities = 56/149 (37%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
 Frame = +3

Query: 357 TFVLLGASGDLARKKIYPTIWYLYRDNLLPHNTKFIGYARTKQSVSEVRERCQKYMKI-- 530
           + ++ GASGDLA K  +P ++ LY   ++P + + IGYAR+K S     +    ++ I  
Sbjct: 3   SIIVFGASGDLATKMTFPALFALYVRKIIPEDFQIIGYARSKLSQEAANKIVTAHIPIDD 62

Query: 531 RPGEEEK-LETFWNANNYVAGSYDGRIDYEFLNRIISNHEKGPIA--NRIFYLAVPPTVF 701
             G  +K L TF     YV G+YD    +E LN II+  E  P +   RIFYL +PP +F
Sbjct: 63  TVGASQKALNTFVEHYKYVPGTYDKPESFEMLNSIIAEKETAPASECTRIFYLVLPPHLF 122

Query: 702 EDVTVNIKNACTSSKGFTRVIIEKPFGRD 788
             V+  IK+    +   TR+I+EKP G D
Sbjct: 123 APVSELIKSKAHPNGMVTRLIVEKPIGFD 151


>SPAC3C7.13c |||glucose-6-phosphate 1-dehydrogenase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 473

 Score = 92.3 bits (219), Expect = 7e-20
 Identities = 53/149 (35%), Positives = 92/149 (61%), Gaps = 5/149 (3%)
 Frame = +3

Query: 357 TFVLLGASGDLARKKIYPTIWYLYRDNLLPHNTKFI-GYARTKQSVSEVRERCQKYMKIR 533
           TF++ GASG+LA KK +P +++L++ NL+  ++ ++ GYAR+K  + E RE  ++ +K  
Sbjct: 3   TFMVFGASGNLANKKTFPALFHLFKRNLVDRSSFYVLGYARSKIPIGEFRESIRESVKPD 62

Query: 534 PGEEEKLETFWNANNYVAGSYDGRIDY-EFLNRIISNHEKGPI--ANRIFYLAVPPTVFE 704
              ++  + F +  +Y +G YD    Y EF   + S  +K     A RIFY+A+PP+V+ 
Sbjct: 63  TESKQVFQDFIDRVSYFSGQYDQSSSYVEFRKHLESVEKKADSSKALRIFYIALPPSVYV 122

Query: 705 DVTVNI-KNACTSSKGFTRVIIEKPFGRD 788
            V+ +I +N     K  +R++IEKPFG++
Sbjct: 123 TVSSHIYENLYLPGK--SRLVIEKPFGKN 149


>SPAC18B11.03c |||N-acetyltransferase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 440

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)
 Frame = -2

Query: 366 VQMYADNQI--QFCFPCLFQYKNFYNDVGLLFWCFFIVTIKHEQV 238
           V  YAD+Q    FC   L  +K  Y+D  L  W  +++  K E V
Sbjct: 76  VVKYADDQKVDSFCNNALQNFKLCYDDETLPLWMVYVLNDKSELV 120


>SPAC1039.01 |||amino acid permease, unknown 5|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 567

 Score = 27.1 bits (57), Expect = 3.1
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -3

Query: 188 LSMWGKLKISFTVIHISTAVYCTIVYGL 105
           LS++G   ISF+V+ +  +V  T+V+GL
Sbjct: 65  LSLFGIFSISFSVLGMLPSVASTLVFGL 92


>SPAC22H10.04 |||protein phosphatase type 2A|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 307

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +3

Query: 453 TKFIGYARTKQSVSEVRERCQKYMKIRPGEEEKLETFWNANNY 581
           TKF+ Y   K  +    + C +  +I    E+KL T W+A NY
Sbjct: 221 TKFLEYNNMKH-ILRAHQLCSEGYQIL--FEKKLSTVWSAPNY 260


>SPCC126.09 |||vacuolar membrane zinc transporter
           |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 418

 Score = 25.8 bits (54), Expect = 7.2
 Identities = 13/41 (31%), Positives = 22/41 (53%)
 Frame = +1

Query: 370 SVRLGTWLEKKFILLSGIYIVTTFCRITPSLLVMRVLSNLF 492
           S+RL   L K+F    G++++T F   T  L ++ +  N F
Sbjct: 5   SIRLFLHLSKEFYDCCGLFLLTFFLLTTCQLRILSLSINAF 45


>SPBC27B12.13 |tom40|SPBC8D2.22|mitochondrial TOM complex subunit
           Tom40|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 344

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +1

Query: 364 YSSVRLGTWLEKKFILLSGIYIVTTFCRITPSL 462
           +S   +  W E+K   L+GIYI++    +TP L
Sbjct: 149 FSFKAMNPWYEEK---LTGIYIISLLQSVTPKL 178


>SPCC1682.11c |||DUF580 family protein|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 574

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 15/46 (32%), Positives = 24/46 (52%)
 Frame = +3

Query: 108 TINYSTIYCGAYMNNSKRNFQLSPHRKCNI*QNNK*FDAEFYNLLA 245
           T+ Y++IY   YMN SK  +Q+    +  + + +  F    Y LLA
Sbjct: 444 TLAYASIYSVPYMNASKALYQIEQLNRVGLRRRSYYFSK--YTLLA 487


>SPBC23G7.08c |rga7||GTPase activating protein
           Rga7|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 695

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -3

Query: 350 IIKFSFVFHVCFNTRTSTMMLDYCFGVF 267
           IIK + +  +   +RT  +++DYCF +F
Sbjct: 665 IIKQATIPEISSFSRTIEILIDYCFTIF 692


>SPCC736.02 |||sequence orphan|Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 286

 Score = 25.4 bits (53), Expect = 9.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 351 DNQIQFCFPCLFQYKNFYNDVGLL 280
           D++++FCF   F+Y    N V LL
Sbjct: 204 DDEVEFCFLTWFEYTMEQNSVELL 227


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,438,570
Number of Sequences: 5004
Number of extensions: 75469
Number of successful extensions: 231
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 226
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 388424860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)