Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_O12
(802 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0018 - 12490940-12491195,12491575-12491775,12492174-124924... 120 1e-27
02_04_0500 + 23500769-23500951,23501200-23501285,23501442-235014... 105 3e-23
03_04_0053 + 16873735-16873927,16874011-16874162,16874286-168743... 95 8e-20
04_04_0298 + 24228569-24228763,24229792-24229900,24230001-242300... 90 2e-18
03_02_0812 - 11439258-11439409,11439537-11439612,11439860-114400... 85 8e-17
03_05_0788 + 27709563-27709832,27710101-27710887,27710947-277110... 32 0.46
07_01_1013 - 8593690-8595006,8595275-8595928,8595951-8596065,859... 31 1.1
09_06_0093 - 20808799-20808876,20809960-20810428,20811510-20812666 30 2.5
04_03_0361 + 14912420-14912720,14912945-14913117,14913474-149137... 30 2.5
10_06_0012 - 9586478-9588880 29 3.3
03_04_0034 + 16679624-16679940,16679980-16680199,16680319-166806... 29 5.7
03_02_0872 - 11983151-11983432,11983488-11983598,11983744-119840... 28 7.5
06_03_1134 + 27892208-27892302,27892489-27892585,27893031-278930... 28 9.9
>07_03_0018 -
12490940-12491195,12491575-12491775,12492174-12492403,
12492624-12492744,12492823-12492972,12493106-12493314,
12494120-12494234,12494346-12494440,12494523-12494758,
12496182-12496338
Length = 589
Score = 120 bits (289), Expect = 1e-27
Identities = 58/148 (39%), Positives = 90/148 (60%), Gaps = 4/148 (2%)
Frame = +3
Query: 357 TFVLLGASGDLARKKIYPTIWYLYRDNLLPHNTKFIGYARTKQSVSEVRERCQKYMKIRP 536
+ ++GASGDLA+KKI+P ++ LY ++ LP + GYAR+K + +E+R K + R
Sbjct: 101 SITVVGASGDLAKKKIFPALFALYYEDCLPKHFTIFGYARSKMTDAELRNMVSKTLTCRI 160
Query: 537 GEEE----KLETFWNANNYVAGSYDGRIDYEFLNRIISNHEKGPIANRIFYLAVPPTVFE 704
+ E K+E F Y +G YD + L++ + HE ++NR+FYL++PP +F
Sbjct: 161 DKRENCNEKMEEFLKRCFYHSGQYDSEEHFMDLDKKLKQHEGSRVSNRLFYLSIPPNIFL 220
Query: 705 DVTVNIKNACTSSKGFTRVIIEKPFGRD 788
DV + +S G+TRVI+EKPFGRD
Sbjct: 221 DVVKCASKSASSGNGWTRVIVEKPFGRD 248
>02_04_0500 +
23500769-23500951,23501200-23501285,23501442-23501490,
23501560-23501746,23502214-23502371,23502447-23502515,
23502692-23502750,23503140-23503176,23503493-23503564,
23503694-23503841,23504124-23504219,23505042-23505181,
23505304-23505419,23505614-23505659,23505747-23505923
Length = 540
Score = 105 bits (253), Expect = 3e-23
Identities = 61/153 (39%), Positives = 91/153 (59%), Gaps = 9/153 (5%)
Frame = +3
Query: 357 TFVLLGASGDLARKKIYPTIWYLYRDNLLPHNTKFI-GYARTKQSVSEVRERCQKYMKIR 533
+ V+LGASGDLA+KK +P +++L++ L I GYAR+ S +RER + Y+K
Sbjct: 36 SIVVLGASGDLAKKKTFPALFHLFQQGFLQSGEVHIFGYARSNISDDGLRERIRGYLK-- 93
Query: 534 PGEEEKLETFWNANNYVAGSYDGRIDYEFLNRIISNHE-----KGPIANRIFYLAVPPTV 698
+E + F YV+GSY+ + LN IS +E K + R+FYLA+PP+V
Sbjct: 94 GASDEHISQFLQLIKYVSGSYNSGEGFASLNNAISENETSKNNKPGSSRRLFYLALPPSV 153
Query: 699 FEDVTVNIKNAC---TSSKGFTRVIIEKPFGRD 788
+ V I++ C +S G+TRVI+EKPFG+D
Sbjct: 154 YPSVCKMIRSYCMNPSSHSGWTRVIVEKPFGKD 186
>03_04_0053 +
16873735-16873927,16874011-16874162,16874286-16874380,
16874704-16874818,16875054-16875343,16875436-16875585,
16876478-16876598,16876671-16876942,16877466-16877937
Length = 619
Score = 94.7 bits (225), Expect = 8e-20
Identities = 60/180 (33%), Positives = 89/180 (49%), Gaps = 32/180 (17%)
Frame = +3
Query: 357 TFVLLGASGDLARKKIYPTIWYLYRDNLLPHNTKFIGYARTKQSVSEVRERCQKYMKIRP 536
+ ++GASGDLA+KKI+P ++ LY ++ LP + GYAR+K S E+R + R
Sbjct: 85 SITVVGASGDLAKKKIFPALFALYYEDCLPEHFTVFGYARSKMSDEELRNMISLTLTCRI 144
Query: 537 GEEE----KLETFWNANNYVAGSYDGR-----------------IDYEFLNRIISN---- 641
+ E K+E F Y +G Y+ ++Y L I N
Sbjct: 145 DQRENCSDKMEQFLKRCFYQSGQYNSEEGFSELDRKLKEKETIVVEYTNLYEQIQNGYDC 204
Query: 642 -------HEKGPIANRIFYLAVPPTVFEDVTVNIKNACTSSKGFTRVIIEKPFGRDDVXS 800
H+ G + NR+FYL++PP +F DV + +S G+TR I+EKPFGRD S
Sbjct: 205 EAHANTYHQAGKVPNRLFYLSIPPNIFVDVVRSASRTASSQDGWTRFIVEKPFGRDSESS 264
>04_04_0298 +
24228569-24228763,24229792-24229900,24230001-24230069,
24230159-24230262,24230361-24230490,24231270-24231374,
24231479-24231689,24231917-24231927,24232331-24232341,
24233863-24233979,24234376-24234441,24234728-24234790,
24236577-24236652,24238003-24238064,24238573-24238658,
24238978-24239026,24239099-24239279,24239448-24239596,
24239682-24239750,24240920-24240991,24241122-24241269,
24241403-24241498,24242024-24242094,24242223-24242338,
24242453-24242498,24242611-24242781
Length = 860
Score = 90.2 bits (214), Expect = 2e-18
Identities = 49/111 (44%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Frame = +3
Query: 465 GYARTKQSVSEVRERCQKYMKIRPGEEEKLETFWNANNYVAGSYDGRIDYEFLNRIISNH 644
GYAR+ S +RER + Y+K EE L F YV+GSYD +E LN+ IS +
Sbjct: 455 GYARSNLSDDGLRERIRGYLK--GASEEHLSDFLQHIKYVSGSYDSGEGFEKLNKEISEY 512
Query: 645 EKGPIAN---RIFYLAVPPTVFEDVTVNIKNACTSSKGFTRVIIEKPFGRD 788
EK + R+FYLA+PP+V+ V I+ C + G+TRVI+EKPFG+D
Sbjct: 513 EKSNKSESPRRLFYLALPPSVYPSVCKMIRTYCMNPSGWTRVIVEKPFGKD 563
>03_02_0812 -
11439258-11439409,11439537-11439612,11439860-11440076,
11440150-11440350,11440673-11440872,11440955-11441075,
11441596-11441636,11441714-11441822,11442037-11442281,
11442382-11442496,11442970-11443064,11444279-11444535,
11444780-11444999,11445473-11445556
Length = 710
Score = 84.6 bits (200), Expect = 8e-17
Identities = 52/161 (32%), Positives = 80/161 (49%), Gaps = 17/161 (10%)
Frame = +3
Query: 351 PHTFVLLGASGDLARKKIYPTIWYLYRDNLLPHNTKFIGYARTKQSVSEVRERCQKYMKI 530
P ++GA+G+LA+ K++P ++ LY LP N GY+R + ++R + +
Sbjct: 155 PLCIAVIGATGELAKNKVFPALFALYYSGFLPQNVGIFGYSRKTLTDEDLRSMIEANLTC 214
Query: 531 RPGE----EEKLETFWNANNYVAGSYDGRIDYEFLNRIISNHE------------KGPIA 662
R +EKL F Y+ YD + LN +S E KG A
Sbjct: 215 RVDHHENCDEKLNEFLKRTYYIDAGYDNKDGMVKLNSKMSQIEGLHGSLIGLFVSKGNCA 274
Query: 663 -NRIFYLAVPPTVFEDVTVNIKNACTSSKGFTRVIIEKPFG 782
NRIFYLAVP DV +++ ++ + +G+ R+IIEKPFG
Sbjct: 275 ANRIFYLAVPQEALLDVALSLADSAQTMQGWNRIIIEKPFG 315
>03_05_0788 +
27709563-27709832,27710101-27710887,27710947-27711086,
27712209-27712442,27712782-27712847
Length = 498
Score = 32.3 bits (70), Expect = 0.46
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 282 VVQHHCRSSCIETNMENKTEFDYPHTFVLLGASGDLARKKIYPTIWYLYRDNLLPH 449
+VQH CR N+ +FD TFVL G G + +++ +Y ++ PH
Sbjct: 295 LVQHMCRHHITTQNVMACCDFDMIFTFVLAGWPGSVHDMRVFHDAMSIY-SHVFPH 349
>07_01_1013 -
8593690-8595006,8595275-8595928,8595951-8596065,
8596560-8596861,8596884-8597369
Length = 957
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/56 (28%), Positives = 27/56 (48%)
Frame = +3
Query: 282 VVQHHCRSSCIETNMENKTEFDYPHTFVLLGASGDLARKKIYPTIWYLYRDNLLPH 449
+VQH CR N+ +FD TF+L+G G + +++ Y ++ PH
Sbjct: 724 LVQHMCRHHITTQNVMACCDFDMIFTFLLVGWPGSVHDMRVFHNAMSTY-SHVFPH 778
>09_06_0093 - 20808799-20808876,20809960-20810428,20811510-20812666
Length = 567
Score = 29.9 bits (64), Expect = 2.5
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +2
Query: 485 ICFRSKRKVSKVHENTPRRRRKIRDILECQ*LCSG 589
+CFR+KR +K+HE+ + R + L C L G
Sbjct: 517 LCFRTKRVYAKIHESKRQSRSAVVQRLACPFLRKG 551
>04_03_0361 +
14912420-14912720,14912945-14913117,14913474-14913779,
14913862-14913936,14913976-14914191,14914741-14915527,
14915587-14915681
Length = 650
Score = 29.9 bits (64), Expect = 2.5
Identities = 17/56 (30%), Positives = 27/56 (48%)
Frame = +3
Query: 282 VVQHHCRSSCIETNMENKTEFDYPHTFVLLGASGDLARKKIYPTIWYLYRDNLLPH 449
+VQH CR N+ +FD TFVL G G + +++ Y +++ PH
Sbjct: 562 LVQHICRHHITTQNVMACCDFDMIFTFVLAGWPGFVHDMRVFNDAMSTY-NHVFPH 616
>10_06_0012 - 9586478-9588880
Length = 800
Score = 29.5 bits (63), Expect = 3.3
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Frame = +3
Query: 381 GDLARKKIYPTIWYLYRDNLLPHNTKFIGYARTKQSVSEV---RERCQKYMKIRPGEEEK 551
G KK + +Y ++ +LPHN + A +K SEV C Y + G
Sbjct: 341 GSTMNKKGFTDKFYCVQNIILPHNAMSVQTAGSKDQCSEVCLSNCSCTAYSYGKGGCSVW 400
Query: 552 LETFWNANNYVAGSYDGRIDYEFLNRIISN 641
+ +N GS DG + ++ R+ +N
Sbjct: 401 HDALYNVRQQSDGSADGNGETLYI-RVAAN 429
>03_04_0034 +
16679624-16679940,16679980-16680199,16680319-16680624,
16680703-16681044,16681066-16681257,16681533-16681684,
16681803-16681974,16682017-16682338,16682414-16682862
Length = 823
Score = 28.7 bits (61), Expect = 5.7
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +3
Query: 282 VVQHHCRSSCIETNMENKTEFDYPHTFVLLGASGDLARKKIYPTIWYLYRDNLLPHN 452
+VQH C N+ +FD TFVL G G + +++ Y ++ PH+
Sbjct: 617 LVQHLCCKGMTTQNVMVVCDFDMRFTFVLAGWPGSVHDMRVFDDAHTTY-THVFPHS 672
>03_02_0872 -
11983151-11983432,11983488-11983598,11983744-11984007,
11984038-11984163,11984257-11984481,11984757-11985311,
11985390-11985695,11985815-11986369
Length = 807
Score = 28.3 bits (60), Expect = 7.5
Identities = 14/33 (42%), Positives = 16/33 (48%)
Frame = +3
Query: 285 VQHHCRSSCIETNMENKTEFDYPHTFVLLGASG 383
VQH CR N+ +FD TFVL G G
Sbjct: 644 VQHLCRKGMTTQNVMAVCDFDMRFTFVLAGWPG 676
>06_03_1134 +
27892208-27892302,27892489-27892585,27893031-27893092,
27893198-27893409,27893487-27893566,27894208-27894328,
27894644-27894731,27894815-27894931,27895031-27895140,
27895334-27895482
Length = 376
Score = 27.9 bits (59), Expect = 9.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 558 TFWNANNYVAGSYDGRIDYEFLNRIISNHEKGP 656
+ W+A+ YV D ++ L +I+SNH K P
Sbjct: 204 SLWDADFYVKVDDDVHVNIATLGQILSNHVKKP 236
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,425,421
Number of Sequences: 37544
Number of extensions: 411710
Number of successful extensions: 916
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 907
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2174172540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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