Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_O12
         (802 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73102-6|CAA97412.1|  522|Caenorhabditis elegans Hypothetical pr...   153   1e-37
Z78415-1|CAB01671.1|  280|Caenorhabditis elegans Hypothetical pr...    30   1.7  
Z68214-1|CAA92444.1|  846|Caenorhabditis elegans Hypothetical pr...    29   5.1  
AC024859-4|AAK29983.4|  472|Caenorhabditis elegans Hypothetical ...    29   5.1  
Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical pr...    28   6.8  
AC006774-5|AAF60618.1|  363|Caenorhabditis elegans Hypothetical ...    28   6.8  
AC025716-16|AAK39609.2|  917|Caenorhabditis elegans Hypothetical...    28   8.9  

>Z73102-6|CAA97412.1|  522|Caenorhabditis elegans Hypothetical
           protein B0035.5 protein.
          Length = 522

 Score =  153 bits (371), Expect = 1e-37
 Identities = 74/164 (45%), Positives = 105/164 (64%), Gaps = 4/164 (2%)
 Frame = +3

Query: 309 CIETNMENKTEFDYPHTFVLLGASGDLARKKIYPTIWYLYRDNLLPHNTKFIGYARTKQS 488
           C+  +M+   +F+ P+ FV+ GASGDLA+KKIYPT+W+L+RDNLLP N KFIGYAR+  +
Sbjct: 19  CLRESMQRDLKFETPYVFVIFGASGDLAKKKIYPTLWWLFRDNLLPVNIKFIGYARSDLT 78

Query: 489 VSEVRERCQKYMKIRPGEEEKLETFWNANNYVAGSYDGRIDYEFLNRIISNHEK---GPI 659
           V ++RE  +K  K+R  E+   + F    +YV G YD    ++ L   I + +K      
Sbjct: 79  VFKLRESFEKNCKVRENEKCAFDDFIKKCSYVQGQYDTSEGFQRLQSSIDDFQKESNNQA 138

Query: 660 ANRIFYLAVPPTVFEDVTVNIKNACTS-SKGFTRVIIEKPFGRD 788
            NR++YLA+PP+VF  V+  +K  C      +TRVIIEKPFG D
Sbjct: 139 VNRLYYLALPPSVFNVVSTELKKNCMDHGDSWTRVIIEKPFGHD 182


>Z78415-1|CAB01671.1|  280|Caenorhabditis elegans Hypothetical
           protein C17G1.1 protein.
          Length = 280

 Score = 30.3 bits (65), Expect = 1.7
 Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 8/105 (7%)
 Frame = +3

Query: 273 TKTVVQHHCRSSCIETNMENKTEFDYPHTFVLLGASGDLARK----KIYPTIWYL----Y 428
           T  VV   C S+C+    ++KT   +  T VL+  S  L        + PT   L    Y
Sbjct: 78  TGDVVIKECASACVSIYTKSKTREGWFWTSVLMDCSEALIWSSPDLSLKPTTMVLLDGVY 137

Query: 429 RDNLLPHNTKFIGYARTKQSVSEVRERCQKYMKIRPGEEEKLETF 563
             +   H+ K+I       S  ++RE    +M   PG  +K  TF
Sbjct: 138 VASRKGHDIKYIFSTNNNNSTLDIREHIFSFMV--PGIRQKRTTF 180


>Z68214-1|CAA92444.1|  846|Caenorhabditis elegans Hypothetical
           protein C10C5.1 protein.
          Length = 846

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 15/55 (27%), Positives = 28/55 (50%)
 Frame = -2

Query: 306 NFYNDVGLLFWCFFIVTIKHEQVNCKILRQITYYFVKCYTFYVGKVENFVYCYSY 142
           NFYN   +LF+  + + + + + + ++ R + Y F    TFY   V   +Y Y +
Sbjct: 698 NFYN---ILFFALWALNLIYLKFSFRLYRGLAYAFWLTLTFYTSIVIIALYIYQF 749


>AC024859-4|AAK29983.4|  472|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.11 protein.
          Length = 472

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 21/69 (30%), Positives = 34/69 (49%)
 Frame = +3

Query: 519 YMKIRPGEEEKLETFWNANNYVAGSYDGRIDYEFLNRIISNHEKGPIANRIFYLAVPPTV 698
           ++ ++P E+E     WN N +     DG++      R  S  +KGP+   I  L V  T+
Sbjct: 99  HLDVQPAEKED---GWNTNPFELTEIDGKL----FGRG-STDDKGPVIAWIAVLKVLQTL 150

Query: 699 FEDVTVNIK 725
             D+ +NIK
Sbjct: 151 GIDLPINIK 159


>Z79754-9|CAB02098.1|  312|Caenorhabditis elegans Hypothetical
           protein F25H2.10 protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = +3

Query: 432 DNLLPHNTKFIGYARTKQSVSEVRERCQKYMKIRPGE 542
           + LLPH  + +G+  TK+ + E+R +  +  K  P +
Sbjct: 76  EKLLPHIVENVGFVFTKEDLGEIRSKLLENRKGAPAK 112


>AC006774-5|AAF60618.1|  363|Caenorhabditis elegans Hypothetical
           protein Y46H3A.4 protein.
          Length = 363

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
 Frame = -2

Query: 315 QYKNFYNDVGLLFWCFFIVTIKHEQV--NCKILRQITYYFVKCYTFYVGKVENFVYC 151
           +Y+NF   +  L WCF+ + + H  +   C   +  TY   + +T++ G   NF  C
Sbjct: 234 KYENF---LVFLSWCFYYLLLTHPPLLGFCTNTKMCTY--TQHFTYFAGFFPNFQSC 285


>AC025716-16|AAK39609.2|  917|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.5 protein.
          Length = 917

 Score = 27.9 bits (59), Expect = 8.9
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 498 VRERCQKYMKIRPGEEEKLETFWNANNYVAG 590
           +R   +     RP E+ K E  WN N Y+ G
Sbjct: 544 LRHAIEAIETFRPNEQLKAEIRWNDNTYITG 574


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,019,474
Number of Sequences: 27780
Number of extensions: 426634
Number of successful extensions: 1172
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1170
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1956310428
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)