Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_O12
         (802 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    27   0.20 
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    27   0.20 
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        25   0.82 
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    23   3.3  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   3.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   4.4  
DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    22   5.8  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    22   5.8  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    22   5.8  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    22   5.8  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    22   5.8  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    22   5.8  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    22   5.8  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    22   5.8  

>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -2

Query: 609 LFFHHKIPLHSYWHSKMSLIFLLLLGVFSCTFDTFLLL 496
           L FHH+        S   L  +LL GV  C  +TFLLL
Sbjct: 536 LLFHHR-DTPVVRASGRELTIILLAGVLVCYLNTFLLL 572


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 27.1 bits (57), Expect = 0.20
 Identities = 16/38 (42%), Positives = 19/38 (50%)
 Frame = -2

Query: 609 LFFHHKIPLHSYWHSKMSLIFLLLLGVFSCTFDTFLLL 496
           L FHH+        S   L  +LL GV  C  +TFLLL
Sbjct: 626 LLFHHR-DTPVVRASGRELTIILLAGVLVCYLNTFLLL 662


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 25.0 bits (52), Expect = 0.82
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = +3

Query: 390 ARKKIYPTIWYLYRD 434
           +RKK+ P  WY Y+D
Sbjct: 290 SRKKVLPYYWYKYQD 304


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = +3

Query: 408 PTIWYLYRDNLLPHNTKFIG 467
           P+I+  Y  N+LP+N    G
Sbjct: 43  PSIYLTYAKNILPNNISIAG 62


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
 Frame = +3

Query: 282 VVQHHCRSS------CIETNMENKTEF--DYPHT-FVLLGASGDLARKKIYPTI-WYLYR 431
           VVQH   S       CI T    +  F  D+P   ++L+G+   +AR+        Y+  
Sbjct: 180 VVQHQSGSEAEAEFVCIATPEAIELHFTTDHPSVAYLLVGSLKGIARQFYNDDANVYILP 239

Query: 432 DNLLPHNTKFIGYARTKQSVSE 497
           D   P+NTKF  Y  T +  SE
Sbjct: 240 D---PYNTKFFRYRITPELYSE 258


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 4/51 (7%)
 Frame = +3

Query: 312 IETNMENKTEFDYPHTFVLLGASGDLARKKIYPTIWYLYRD----NLLPHN 452
           +  N++ K  +  P       +   + RKK+  ++W+ Y+      LLP N
Sbjct: 158 VYNNIKRKRSWSRPREPAQTTSKAGIHRKKVLLSVWWDYKGIVYFELLPPN 208


>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 495 EVRERCQKYMKIRPGEEEKLETFWNANNY 581
           E RE+ ++Y K+   +E+ LE   + N Y
Sbjct: 11  EYREKNRRYEKLHNEKEKLLEERTSRNRY 39


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 495 EVRERCQKYMKIRPGEEEKLETFWNANNY 581
           E RE+ ++Y K+   +E+ LE   + N Y
Sbjct: 11  EYREKNRRYEKLHNEKEKLLEERTSRNRY 39


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 495 EVRERCQKYMKIRPGEEEKLETFWNANNY 581
           E RE+ ++Y K+   +E+ LE   + N Y
Sbjct: 11  EYREKNRRYEKLHNEKEKLLEERTSRNRY 39


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 495 EVRERCQKYMKIRPGEEEKLETFWNANNY 581
           E RE+ ++Y K+   +E+ LE   + N Y
Sbjct: 11  EYREKNRRYEKLHNEKEKLLEERTSRNRY 39


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 495 EVRERCQKYMKIRPGEEEKLETFWNANNY 581
           E RE+ ++Y K+   +E+ LE   + N Y
Sbjct: 11  EYREKNRRYEKLHNEKEKLLEERTSRNRY 39


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 495 EVRERCQKYMKIRPGEEEKLETFWNANNY 581
           E RE+ ++Y K+   +E+ LE   + N Y
Sbjct: 11  EYREKNRRYEKLHNEKEKLLEERTSRNRY 39


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +3

Query: 495 EVRERCQKYMKIRPGEEEKLETFWNANNY 581
           E RE+ ++Y K+   +E+ LE   + N Y
Sbjct: 11  EYREKNRRYEKLHNEKEKLLEERTSRNRY 39


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 11/44 (25%), Positives = 22/44 (50%)
 Frame = +3

Query: 420 YLYRDNLLPHNTKFIGYARTKQSVSEVRERCQKYMKIRPGEEEK 551
           Y  ++ LL   T    Y+R+++   +  +  +KY K R   +E+
Sbjct: 23  YNEKEKLLEERTSRKRYSRSREREQKSYKNERKYRKYRERSKER 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,121
Number of Sequences: 438
Number of extensions: 5328
Number of successful extensions: 27
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25367793
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)