Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_O09
(805 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for ... 201 2e-51
L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 201 2e-51
EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1 ... 201 2e-51
CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein. 201 2e-51
CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein. 201 2e-51
BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,... 201 2e-51
BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,... 201 2e-51
AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,... 201 2e-51
AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase pr... 201 2e-51
AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide dism... 201 2e-51
L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutas... 198 1e-50
CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein. 133 8e-31
BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for su... 133 8e-31
BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for su... 133 8e-31
AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase co... 133 8e-31
AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for su... 133 8e-31
U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase prot... 100 7e-21
J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein. 100 7e-21
CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein. 100 7e-21
BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,... 100 7e-21
AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,... 100 7e-21
X01784-1|CAA25919.1| 35|Homo sapiens protein ( Human superoxid... 54 5e-07
X95228-1|CAA64520.1| 35|Homo sapiens Cu /Zn superoxide dismuta... 53 1e-06
X01783-1|CAA25918.1| 39|Homo sapiens protein ( Human superoxid... 52 3e-06
L46375-1|AAB59627.1| 35|Homo sapiens superoxide dismutase prot... 52 3e-06
X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxid... 50 1e-05
L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase prot... 47 9e-05
L44746-1|AAC41773.1| 35|Homo sapiens superoxide dismutase prot... 46 2e-04
AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein. 31 4.9
AK090431-1|BAC03412.1| 778|Homo sapiens FLJ00348 protein protein. 31 4.9
AK074109-1|BAB84935.1| 499|Homo sapiens FLJ00180 protein protein. 31 4.9
U45955-1|AAB16888.1| 283|Homo sapiens M6b protein. 30 8.5
BC047295-1|AAH47295.1| 305|Homo sapiens glycoprotein M6B protein. 30 8.5
BC008151-1|AAH08151.1| 265|Homo sapiens glycoprotein M6B protein. 30 8.5
BC006212-1|AAH06212.2| 669|Homo sapiens leucine zipper, putativ... 30 8.5
AY029201-1|AAK31577.1| 644|Homo sapiens LAPSER1 protein. 30 8.5
AL834338-1|CAD39005.1| 531|Homo sapiens hypothetical protein pr... 30 8.5
AL133215-15|CAI10929.1| 669|Homo sapiens novel protein protein. 30 8.5
AK097997-1|BAC05212.1| 328|Homo sapiens protein ( Homo sapiens ... 30 8.5
AK095657-1|BAC04600.1| 328|Homo sapiens protein ( Homo sapiens ... 30 8.5
AF217500-1|AAL56647.1| 2072|Homo sapiens histone acetyltransfera... 30 8.5
AF047197-1|AAD13718.1| 265|Homo sapiens M6ba protein. 30 8.5
AF037347-2|AAC19165.1| 283|Homo sapiens neuronal membrane glyco... 30 8.5
AF037347-1|AAC19166.1| 265|Homo sapiens neuronal membrane glyco... 30 8.5
AF016004-1|AAC28560.1| 265|Homo sapiens m6b1 protein. 30 8.5
AB209525-1|BAD92762.1| 280|Homo sapiens glycoprotein M6B isofor... 30 8.5
AB058716-1|BAB47442.1| 673|Homo sapiens KIAA1813 protein protein. 30 8.5
>X02317-1|CAA26182.1| 154|Homo sapiens protein ( Human mRNA for
Cu/Zn superoxide dismutase (SOD). ).
Length = 154
Score = 201 bits (491), Expect = 2e-51
Identities = 98/155 (63%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 156 MPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTS 329
M KAVCVL+G V G + F+Q+ PV V G ++GLT+G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 330 AGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
AG HFNP + HGGP RHVGDLGN+ A +D GV VSI+DS ISL G + IIGRTLV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKD-GVADVSIEDSVISLSGDHCIIGRTLV 119
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>L44139-1|AAB05661.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 201 bits (491), Expect = 2e-51
Identities = 98/155 (63%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 156 MPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTS 329
M KAVCVL+G V G + F+Q+ PV V G ++GLT+G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 330 AGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
AG HFNP + HGGP RHVGDLGN+ A +D GV VSI+DS ISL G + IIGRTLV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKD-GVADVSIEDSVISLSGDHCIIGRTLV 119
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>EF151142-1|ABL96616.1| 154|Homo sapiens superoxide dismutase 1
protein.
Length = 154
Score = 201 bits (491), Expect = 2e-51
Identities = 98/155 (63%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 156 MPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTS 329
M KAVCVL+G V G + F+Q+ PV V G ++GLT+G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 330 AGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
AG HFNP + HGGP RHVGDLGN+ A +D GV VSI+DS ISL G + IIGRTLV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKD-GVADVSIEDSVISLSGDHCIIGRTLV 119
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>CR541742-1|CAG46542.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 201 bits (491), Expect = 2e-51
Identities = 98/155 (63%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 156 MPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTS 329
M KAVCVL+G V G + F+Q+ PV V G ++GLT+G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 330 AGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
AG HFNP + HGGP RHVGDLGN+ A +D GV VSI+DS ISL G + IIGRTLV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKD-GVADVSIEDSVISLSGDHCIIGRTLV 119
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>CR450355-1|CAG29351.1| 154|Homo sapiens SOD1 protein.
Length = 154
Score = 201 bits (491), Expect = 2e-51
Identities = 98/155 (63%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 156 MPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTS 329
M KAVCVL+G V G + F+Q+ PV V G ++GLT+G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 330 AGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
AG HFNP + HGGP RHVGDLGN+ A +D GV VSI+DS ISL G + IIGRTLV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKD-GVADVSIEDSVISLSGDHCIIGRTLV 119
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>BT006676-1|AAP35322.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 201 bits (491), Expect = 2e-51
Identities = 98/155 (63%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 156 MPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTS 329
M KAVCVL+G V G + F+Q+ PV V G ++GLT+G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 330 AGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
AG HFNP + HGGP RHVGDLGN+ A +D GV VSI+DS ISL G + IIGRTLV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKD-GVADVSIEDSVISLSGDHCIIGRTLV 119
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>BC001034-1|AAH01034.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 201 bits (491), Expect = 2e-51
Identities = 98/155 (63%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 156 MPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTS 329
M KAVCVL+G V G + F+Q+ PV V G ++GLT+G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 330 AGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
AG HFNP + HGGP RHVGDLGN+ A +D GV VSI+DS ISL G + IIGRTLV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKD-GVADVSIEDSVISLSGDHCIIGRTLV 119
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>AY835629-1|AAV80422.1| 154|Homo sapiens superoxide dismutase 1,
soluble (amyotrophic lateral sclerosis 1 (adult))
protein.
Length = 154
Score = 201 bits (491), Expect = 2e-51
Identities = 98/155 (63%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 156 MPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTS 329
M KAVCVL+G V G + F+Q+ PV V G ++GLT+G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 330 AGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
AG HFNP + HGGP RHVGDLGN+ A +D GV VSI+DS ISL G + IIGRTLV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKD-GVADVSIEDSVISLSGDHCIIGRTLV 119
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>AY450286-1|AAR21563.1| 154|Homo sapiens superoxide dismutase
protein.
Length = 154
Score = 201 bits (491), Expect = 2e-51
Identities = 98/155 (63%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 156 MPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTS 329
M KAVCVL+G V G + F+Q+ PV V G ++GLT+G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 330 AGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
AG HFNP + HGGP RHVGDLGN+ A +D GV VSI+DS ISL G + IIGRTLV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKD-GVADVSIEDSVISLSGDHCIIGRTLV 119
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>AY049787-1|AAL15444.1| 154|Homo sapiens soluble superoxide
dismutase 1 protein.
Length = 154
Score = 201 bits (491), Expect = 2e-51
Identities = 98/155 (63%), Positives = 113/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 156 MPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTS 329
M KAVCVL+G V G + F+Q+ PV V G ++GLT+G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 330 AGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
AG HFNP + HGGP RHVGDLGN+ A +D GV VSI+DS ISL G + IIGRTLV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKD-GVADVSIEDSVISLSGDHCIIGRTLV 119
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>L44139-2|AAB05662.1| 154|Homo sapiens Cu/Zn-superoxide dismutase
protein.
Length = 154
Score = 198 bits (484), Expect = 1e-50
Identities = 97/155 (62%), Positives = 112/155 (72%), Gaps = 2/155 (1%)
Frame = +3
Query: 156 MPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTS 329
M KAVCVL+G V G + F+Q+ PV V G ++GLT+G HGFHVHEFGDNT GCTS
Sbjct: 1 MATKAVCVLKGDGPVQGIINFEQKESNGPVKVWGSIKGLTEGLHGFHVHEFGDNTAGCTS 60
Query: 330 AGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
AG HFNP + HGGP RHVGDLGN+ A +D GV VSI+ S ISL G + IIGRTLV
Sbjct: 61 AGPHFNPLSRKHGGPKDEERHVGDLGNVTADKD-GVADVSIEGSVISLSGDHCIIGRTLV 119
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 120 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 154
>CR541928-1|CAG46726.1| 274|Homo sapiens CCS protein.
Length = 274
Score = 133 bits (321), Expect = 8e-31
Identities = 69/156 (44%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Frame = +3
Query: 141 SSNLTMPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNT 314
S L AV +L G V G V F Q ++ G + GL G HG HVH++GD T
Sbjct: 80 SGQLQNLGAAVAILGGPGTVQGVVRF-LQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLT 138
Query: 315 NGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSII 494
N C S G HFNP+ HGGP + RH GDLGN+ A D G ++D Q+ + +I
Sbjct: 139 NNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADAD-GRAIFRMEDEQLKVW---DVI 194
Query: 495 GRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVI 602
GR+L++ DDLG GG+ LSK TGN+G R+ACG+I
Sbjct: 195 GRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGII 230
>BC112055-1|AAI12056.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 133 bits (321), Expect = 8e-31
Identities = 69/156 (44%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Frame = +3
Query: 141 SSNLTMPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNT 314
S L AV +L G V G V F Q ++ G + GL G HG HVH++GD T
Sbjct: 80 SGQLQNLGAAVAILGGPGTVQGVVRF-LQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLT 138
Query: 315 NGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSII 494
N C S G HFNP+ HGGP + RH GDLGN+ A D G ++D Q+ + +I
Sbjct: 139 NNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADAD-GRAIFRMEDEQLKVW---DVI 194
Query: 495 GRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVI 602
GR+L++ DDLG GG+ LSK TGN+G R+ACG+I
Sbjct: 195 GRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGII 230
>BC105016-1|AAI05017.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 133 bits (321), Expect = 8e-31
Identities = 69/156 (44%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Frame = +3
Query: 141 SSNLTMPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNT 314
S L AV +L G V G V F Q ++ G + GL G HG HVH++GD T
Sbjct: 80 SGQLQNLGAAVAILGGPGTVQGVVRF-LQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLT 138
Query: 315 NGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSII 494
N C S G HFNP+ HGGP + RH GDLGN+ A D G ++D Q+ + +I
Sbjct: 139 NNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADAD-GRAIFRMEDEQLKVW---DVI 194
Query: 495 GRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVI 602
GR+L++ DDLG GG+ LSK TGN+G R+ACG+I
Sbjct: 195 GRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGII 230
>AY113179-1|AAM50090.1| 274|Homo sapiens superoxide dismutase
copper chaperone protein.
Length = 274
Score = 133 bits (321), Expect = 8e-31
Identities = 69/156 (44%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Frame = +3
Query: 141 SSNLTMPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNT 314
S L AV +L G V G V F Q ++ G + GL G HG HVH++GD T
Sbjct: 80 SGQLQNLGAAVAILGGPGTVQGVVRF-LQLTPERCLIDGTIDGLEPGLHGLHVHQYGDLT 138
Query: 315 NGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSII 494
N C S G HFNP+ HGGP + RH GDLGN+ A D G ++D Q+ + +I
Sbjct: 139 NNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADAD-GRAIFRMEDEQLKVW---DVI 194
Query: 495 GRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVI 602
GR+L++ DDLG GG+ LSK TGN+G R+ACG+I
Sbjct: 195 GRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGII 230
>AF002210-1|AAC51764.1| 274|Homo sapiens copper chaperone for
superoxide dismutase protein.
Length = 274
Score = 133 bits (321), Expect = 8e-31
Identities = 69/156 (44%), Positives = 90/156 (57%), Gaps = 2/156 (1%)
Frame = +3
Query: 141 SSNLTMPAKAVCVLRG--AVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNT 314
S L AV +L G V G V F Q ++ G + GL G HG HVH++GD T
Sbjct: 80 SGQLQNLGAAVAILGGPGTVQGVVRF-LQLTPERCLIEGTIDGLEPGLHGLHVHQYGDLT 138
Query: 315 NGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSII 494
N C S G HFNP+ HGGP + RH GDLGN+ A D G ++D Q+ + +I
Sbjct: 139 NNCNSCGNHFNPDGASHGGPQDSDRHRGDLGNVRADAD-GRAIFRMEDEQLKVW---DVI 194
Query: 495 GRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVI 602
GR+L++ DDLG GG+ LSK TGN+G R+ACG+I
Sbjct: 195 GRSLIIDEGEDDLGRGGHPLSKITGNSGERLACGII 230
>U10116-1|AAA62278.1| 240|Homo sapiens superoxide dismutase
protein.
Length = 240
Score = 100 bits (239), Expect = 7e-21
Identities = 57/154 (37%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Frame = +3
Query: 159 PAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGL----TKGKHGFHVHEFGDNTNGCT 326
P+ + + V+G V F Q ++ + ++G HVH+FGD + GC
Sbjct: 67 PSATLDAAQPRVTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCE 126
Query: 327 SAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTL 506
S G H+NP H +H GD GN A+ D + + SL GP+SI+GR +
Sbjct: 127 STGPHYNPLAVPHP------QHPGDFGNF-AVRDGSLWRYRA-GLAASLAGPHSIVGRAV 178
Query: 507 VVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
VVHA DDLG GGN+ S GNAG R+AC V+G+
Sbjct: 179 VVHAGEDDLGRGGNQASVENGNAGRRLACCVVGV 212
>J02947-1|AAA66000.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 100 bits (239), Expect = 7e-21
Identities = 57/154 (37%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Frame = +3
Query: 159 PAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGL----TKGKHGFHVHEFGDNTNGCT 326
P+ + + V+G V F Q ++ + ++G HVH+FGD + GC
Sbjct: 67 PSATLDAAQPRVTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCE 126
Query: 327 SAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTL 506
S G H+NP H +H GD GN A+ D + + SL GP+SI+GR +
Sbjct: 127 STGPHYNPLAVPHP------QHPGDFGNF-AVRDGSLWRYRA-GLAASLAGPHSIVGRAV 178
Query: 507 VVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
VVHA DDLG GGN+ S GNAG R+AC V+G+
Sbjct: 179 VVHAGEDDLGRGGNQASVENGNAGRRLACCVVGV 212
>CR541853-1|CAG46651.1| 240|Homo sapiens SOD3 protein.
Length = 240
Score = 100 bits (239), Expect = 7e-21
Identities = 57/154 (37%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Frame = +3
Query: 159 PAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGL----TKGKHGFHVHEFGDNTNGCT 326
P+ + + V+G V F Q ++ + ++G HVH+FGD + GC
Sbjct: 67 PSATLDAAQPRVTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCE 126
Query: 327 SAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTL 506
S G H+NP H +H GD GN A+ D + + SL GP+SI+GR +
Sbjct: 127 STGPHYNPLAVPHP------QHPGDFGNF-AVRDGSLWRYRA-GLAASLAGPHSIVGRAV 178
Query: 507 VVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
VVHA DDLG GGN+ S GNAG R+AC V+G+
Sbjct: 179 VVHAGEDDLGRGGNQASVENGNAGRRLACCVVGV 212
>BC014418-1|AAH14418.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 100 bits (239), Expect = 7e-21
Identities = 57/154 (37%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Frame = +3
Query: 159 PAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGL----TKGKHGFHVHEFGDNTNGCT 326
P+ + + V+G V F Q ++ + ++G HVH+FGD + GC
Sbjct: 67 PSATLDAAQPRVTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCE 126
Query: 327 SAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTL 506
S G H+NP H +H GD GN A+ D + + SL GP+SI+GR +
Sbjct: 127 STGPHYNPLAVPHP------QHPGDFGNF-AVRDGSLWRYRA-GLAASLAGPHSIVGRAV 178
Query: 507 VVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
VVHA DDLG GGN+ S GNAG R+AC V+G+
Sbjct: 179 VVHAGEDDLGRGGNQASVENGNAGRRLACCVVGV 212
>AY787834-1|AAV40827.1| 240|Homo sapiens superoxide dismutase 3,
extracellular protein.
Length = 240
Score = 100 bits (239), Expect = 7e-21
Identities = 57/154 (37%), Positives = 80/154 (51%), Gaps = 4/154 (2%)
Frame = +3
Query: 159 PAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGL----TKGKHGFHVHEFGDNTNGCT 326
P+ + + V+G V F Q ++ + ++G HVH+FGD + GC
Sbjct: 67 PSATLDAAQPRVTGVVLFRQLAPRAKLDAFFALEGFPTEPNSSSRAIHVHQFGDLSQGCE 126
Query: 327 SAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTL 506
S G H+NP H +H GD GN A+ D + + SL GP+SI+GR +
Sbjct: 127 STGPHYNPLAVPHP------QHPGDFGNF-AVRDGSLWRYRA-GLAASLAGPHSIVGRAV 178
Query: 507 VVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
VVHA DDLG GGN+ S GNAG R+AC V+G+
Sbjct: 179 VVHAGEDDLGRGGNQASVENGNAGRRLACCVVGV 212
>X01784-1|CAA25919.1| 35|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 5 and 3' flanking region.
).
Length = 35
Score = 54.4 bits (125), Expect = 5e-07
Identities = 24/35 (68%), Positives = 27/35 (77%)
Frame = +3
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 1 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGIAQ 35
>X95228-1|CAA64520.1| 35|Homo sapiens Cu /Zn superoxide dismutase
protein.
Length = 35
Score = 53.2 bits (122), Expect = 1e-06
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +3
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH DDLG GGNE S TGNAG R+ACGVIG A+
Sbjct: 1 VHEKADDLGKGGNEESTKTGNAGSRLACGVIGTAQ 35
>X01783-1|CAA25918.1| 39|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 4. ).
Length = 39
Score = 51.6 bits (118), Expect = 3e-06
Identities = 27/40 (67%), Positives = 31/40 (77%)
Frame = +3
Query: 390 HVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLV 509
HVGDLGN+ A +D GV VSI+DS ISL G + IIGRTLV
Sbjct: 1 HVGDLGNVTADKD-GVADVSIEDSVISLSGDHCIIGRTLV 39
>L46375-1|AAB59627.1| 35|Homo sapiens superoxide dismutase
protein.
Length = 35
Score = 51.6 bits (118), Expect = 3e-06
Identities = 23/35 (65%), Positives = 26/35 (74%)
Frame = +3
Query: 510 VHADPDDLGLGGNELSKTTGNAGGRIACGVIGLAK 614
VH D LG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 1 VHEKADHLGKGGNEESTKTGNAGSRLACGVIGIAQ 35
>X01781-1|CAA25916.1| 32|Homo sapiens protein ( Human superoxide
dismutase (SOD-1) gene exon 2. ).
Length = 32
Score = 50.0 bits (114), Expect = 1e-05
Identities = 20/27 (74%), Positives = 23/27 (85%)
Frame = +3
Query: 234 PVVVSGXVQGLTKGKHGFHVHEFGDNT 314
PV V G ++GLT+G HGFHVHEFGDNT
Sbjct: 5 PVKVWGSIKGLTEGLHGFHVHEFGDNT 31
>L46374-1|AAB59626.1| 32|Homo sapiens superoxide dismutase
protein.
Length = 32
Score = 46.8 bits (106), Expect = 9e-05
Identities = 19/27 (70%), Positives = 22/27 (81%)
Frame = +3
Query: 234 PVVVSGXVQGLTKGKHGFHVHEFGDNT 314
PV V G ++GLT+G HGFHV EFGDNT
Sbjct: 5 PVKVWGSIKGLTEGLHGFHVQEFGDNT 31
>L44746-1|AAC41773.1| 35|Homo sapiens superoxide dismutase
protein.
Length = 35
Score = 46.0 bits (104), Expect = 2e-04
Identities = 20/28 (71%), Positives = 23/28 (82%)
Frame = +3
Query: 531 LGLGGNELSKTTGNAGGRIACGVIGLAK 614
LG GGNE S TGNAG R+ACGVIG+A+
Sbjct: 8 LGKGGNEESTKTGNAGSRLACGVIGIAQ 35
>AY601811-1|AAT48367.1| 1065|Homo sapiens caterpiller 16.2 protein.
Length = 1065
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +3
Query: 402 LGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNEL 554
LG++ + +D + K+S+ ++QIS G + + R+L+V+ L L GN +
Sbjct: 657 LGSVLSGKDCRIQKISLAENQISNKGAKA-LARSLLVNRSLTSLDLRGNSI 706
>AK090431-1|BAC03412.1| 778|Homo sapiens FLJ00348 protein protein.
Length = 778
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +3
Query: 402 LGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNEL 554
LG++ + +D + K+S+ ++QIS G + + R+L+V+ L L GN +
Sbjct: 674 LGSVLSGKDCRIQKISLAENQISNKGAKA-LARSLLVNRSLTSLDLRGNSI 723
>AK074109-1|BAB84935.1| 499|Homo sapiens FLJ00180 protein protein.
Length = 499
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/51 (31%), Positives = 31/51 (60%)
Frame = +3
Query: 402 LGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNEL 554
LG++ + +D + K+S+ ++QIS G + + R+L+V+ L L GN +
Sbjct: 91 LGSVLSGKDCRIQKISLAENQISNKGAKA-LARSLLVNRSLTSLDLRGNSI 140
>U45955-1|AAB16888.1| 283|Homo sapiens M6b protein.
Length = 283
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 66 VRGFSCQTCFLIFNLFSSCSPLNLTSSNLTMPAKAVCV 179
V GFS F+ +N++S+C + +N T + +CV
Sbjct: 168 VFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICV 205
>BC047295-1|AAH47295.1| 305|Homo sapiens glycoprotein M6B protein.
Length = 305
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 66 VRGFSCQTCFLIFNLFSSCSPLNLTSSNLTMPAKAVCV 179
V GFS F+ +N++S+C + +N T + +CV
Sbjct: 190 VFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICV 227
>BC008151-1|AAH08151.1| 265|Homo sapiens glycoprotein M6B protein.
Length = 265
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 66 VRGFSCQTCFLIFNLFSSCSPLNLTSSNLTMPAKAVCV 179
V GFS F+ +N++S+C + +N T + +CV
Sbjct: 150 VFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICV 187
>BC006212-1|AAH06212.2| 669|Homo sapiens leucine zipper, putative
tumor suppressor 2 protein.
Length = 669
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 477 GPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIG 605
G ++ G V P G + SK+TG+ GGR+A G++G
Sbjct: 253 GRGALPGPARGVPTGPSHSDSGRSSSSKSTGSLGGRVAGGLLG 295
>AY029201-1|AAK31577.1| 644|Homo sapiens LAPSER1 protein.
Length = 644
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 477 GPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIG 605
G ++ G V P G + SK+TG+ GGR+A G++G
Sbjct: 228 GRGALPGPARGVPTGPSHSDSGRSSSSKSTGSLGGRVAGGLLG 270
>AL834338-1|CAD39005.1| 531|Homo sapiens hypothetical protein
protein.
Length = 531
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 477 GPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIG 605
G ++ G V P G + SK+TG+ GGR+A G++G
Sbjct: 115 GRGALPGPARGVPTGPSHSDSGRSSSSKSTGSLGGRVAGGLLG 157
>AL133215-15|CAI10929.1| 669|Homo sapiens novel protein protein.
Length = 669
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 477 GPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIG 605
G ++ G V P G + SK+TG+ GGR+A G++G
Sbjct: 253 GRGALPGPARGVPTGPSHSDSGRSSSSKSTGSLGGRVAGGLLG 295
>AK097997-1|BAC05212.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ40678 fis, clone THYMU2022660. ).
Length = 328
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 477 GPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIG 605
G ++ G V P G + SK+TG+ GGR+A G++G
Sbjct: 116 GRGALPGPARGVPTGPSHSDSGRSSSSKSTGSLGGRVAGGLLG 158
>AK095657-1|BAC04600.1| 328|Homo sapiens protein ( Homo sapiens
cDNA FLJ38338 fis, clone FCBBF3027104, highly similar to
Mus musculus proteolipid M6B isoform
alpha-beta-TMD-omega (M6B) ).
Length = 328
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 66 VRGFSCQTCFLIFNLFSSCSPLNLTSSNLTMPAKAVCV 179
V GFS F+ +N++S+C + +N T + +CV
Sbjct: 190 VFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICV 227
>AF217500-1|AAL56647.1| 2072|Homo sapiens histone acetyltransferase
MOZ2 protein.
Length = 2072
Score = 30.3 bits (65), Expect = 8.5
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 114 SSCSPLNLTSSNLTMPAKAVCVLRGAVSGTVFFDQQXXKS 233
+SCS NLTSS+LT + AV +SGT QQ S
Sbjct: 1701 NSCSYSNLTSSSLTQSSCAVTQQMSNISGTCSMLQQTSIS 1740
>AF047197-1|AAD13718.1| 265|Homo sapiens M6ba protein.
Length = 265
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 66 VRGFSCQTCFLIFNLFSSCSPLNLTSSNLTMPAKAVCV 179
V GFS F+ +N++S+C + +N T + +CV
Sbjct: 150 VFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICV 187
>AF037347-2|AAC19165.1| 283|Homo sapiens neuronal membrane
glycoprotein M6b protein.
Length = 283
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 66 VRGFSCQTCFLIFNLFSSCSPLNLTSSNLTMPAKAVCV 179
V GFS F+ +N++S+C + +N T + +CV
Sbjct: 168 VFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICV 205
>AF037347-1|AAC19166.1| 265|Homo sapiens neuronal membrane
glycoprotein M6b protein.
Length = 265
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 66 VRGFSCQTCFLIFNLFSSCSPLNLTSSNLTMPAKAVCV 179
V GFS F+ +N++S+C + +N T + +CV
Sbjct: 150 VFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICV 187
>AF016004-1|AAC28560.1| 265|Homo sapiens m6b1 protein.
Length = 265
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 66 VRGFSCQTCFLIFNLFSSCSPLNLTSSNLTMPAKAVCV 179
V GFS F+ +N++S+C + +N T + +CV
Sbjct: 150 VFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICV 187
>AB209525-1|BAD92762.1| 280|Homo sapiens glycoprotein M6B isoform 1
variant protein.
Length = 280
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/38 (31%), Positives = 21/38 (55%)
Frame = +3
Query: 66 VRGFSCQTCFLIFNLFSSCSPLNLTSSNLTMPAKAVCV 179
V GFS F+ +N++S+C + +N T + +CV
Sbjct: 142 VFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICV 179
>AB058716-1|BAB47442.1| 673|Homo sapiens KIAA1813 protein protein.
Length = 673
Score = 30.3 bits (65), Expect = 8.5
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +3
Query: 477 GPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIG 605
G ++ G V P G + SK+TG+ GGR+A G++G
Sbjct: 257 GRGALPGPARGVPTGPSHSDSGRSSSSKSTGSLGGRVAGGLLG 299
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,644,378
Number of Sequences: 237096
Number of extensions: 2155833
Number of successful extensions: 4216
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 4020
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4182
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9924838204
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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