Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_O09
(805 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z19591-1|CAA79639.1| 153|Drosophila melanogaster Cu-Zn superoxi... 216 3e-56
Y00367-1|CAA68443.1| 153|Drosophila melanogaster protein ( Dros... 216 3e-56
X13780-1|CAA32028.1| 153|Drosophila melanogaster Cu-Zn superoxi... 216 3e-56
M24421-1|AAA28906.1| 153|Drosophila melanogaster Cu/Zn-superoxi... 216 3e-56
AY071435-1|AAL49057.1| 153|Drosophila melanogaster RE52090p pro... 216 3e-56
AE014296-1904|AAF50095.1| 153|Drosophila melanogaster CG11793-P... 216 3e-56
X17332-1|CAA35210.1| 153|Drosophila melanogaster Cu-Zn superoxi... 216 3e-56
S72589-1|AAD14963.2| 146|Drosophila melanogaster slow superoxid... 206 4e-53
BT015997-1|AAV36882.1| 250|Drosophila melanogaster RE42883p pro... 168 7e-42
BT003225-1|AAO24980.1| 181|Drosophila melanogaster LP09315p pro... 168 7e-42
AY060339-1|AAL25378.1| 188|Drosophila melanogaster GH23708p pro... 168 7e-42
AE013599-1300|AAG22285.1| 181|Drosophila melanogaster CG9027-PB... 168 7e-42
AE013599-1299|AAF58647.3| 181|Drosophila melanogaster CG9027-PA... 168 7e-42
AE013599-1298|AAM68736.1| 188|Drosophila melanogaster CG9027-PC... 168 7e-42
AE013599-1297|ABI31086.1| 217|Drosophila melanogaster CG9027-PD... 168 7e-42
AY026866-1|AAK07691.1| 264|Drosophila melanogaster Cu-chaperone... 120 2e-27
AE013599-1034|AAF58838.1| 264|Drosophila melanogaster CG17753-P... 120 2e-27
BT023314-1|AAY55730.1| 171|Drosophila melanogaster IP10146p pro... 66 7e-11
AE014297-3873|AAF56526.1| 270|Drosophila melanogaster CG5948-PA... 66 7e-11
M18823-1|AAA28905.1| 32|Drosophila melanogaster protein ( D.me... 43 4e-04
AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA... 33 0.35
BT011091-1|AAR82757.1| 1199|Drosophila melanogaster RE50384p pro... 32 1.1
AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-P... 32 1.1
AE014297-4551|AAF57015.4| 1097|Drosophila melanogaster CG31028-P... 32 1.1
AY070526-1|AAL47997.1| 647|Drosophila melanogaster GH27708p pro... 30 3.2
AE014296-1332|AAN12025.1| 647|Drosophila melanogaster CG17888-P... 30 3.2
EF596938-1|ABQ96635.1| 178|Drosophila melanogaster SNMP1 protein. 29 7.4
EF560171-1|ABQ42605.1| 162|Drosophila melanogaster SNMP1 protein. 29 7.4
EF560170-1|ABQ42604.1| 144|Drosophila melanogaster SNMP1 protein. 29 7.4
BT024286-1|ABC86348.1| 551|Drosophila melanogaster IP13851p pro... 29 7.4
AY060935-1|AAL28483.1| 360|Drosophila melanogaster GM07741p pro... 29 7.4
AY060400-1|AAL25439.1| 482|Drosophila melanogaster LD32009p pro... 29 7.4
AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1 pr... 29 7.4
AF149795-1|AAF03218.1| 481|Drosophila melanogaster Drep2 protein. 29 7.4
AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB ... 29 7.4
AE014297-2947|AAF55863.2| 551|Drosophila melanogaster CG7000-PA... 29 7.4
AE013599-846|AAF58954.1| 482|Drosophila melanogaster CG1975-PA ... 29 7.4
X14569-1|CAA32707.1| 490|Drosophila melanogaster protein ( Dros... 29 9.8
X12506-1|CAA31024.1| 490|Drosophila melanogaster twist protein ... 29 9.8
AY060413-1|AAL25452.1| 307|Drosophila melanogaster LD36772p pro... 29 9.8
AE013599-3890|AAF47219.1| 307|Drosophila melanogaster CG4612-PA... 29 9.8
>Z19591-1|CAA79639.1| 153|Drosophila melanogaster Cu-Zn superoxide
dismutase protein.
Length = 153
Score = 216 bits (528), Expect = 3e-56
Identities = 102/154 (66%), Positives = 119/154 (77%)
Frame = +3
Query: 156 MPAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAG 335
M KAVCV+ G GTVFF+Q+ +PV VSG V GL KG HGFHVHEFGDNTNGC S+G
Sbjct: 1 MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60
Query: 336 AHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVH 515
HFNP ++HG P RH+GDLGNIEA D TKV+I DS+I+L G +SIIGRT+VVH
Sbjct: 61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDC-PTKVNITDSKITLFGADSIIGRTVVVH 119
Query: 516 ADPDDLGLGGNELSKTTGNAGGRIACGVIGLAKI 617
AD DDLG GG+ELSK+TGNAG RI CGVIG+AK+
Sbjct: 120 ADADDLGQGGHELSKSTGNAGARIGCGVIGIAKV 153
>Y00367-1|CAA68443.1| 153|Drosophila melanogaster protein (
Drosophila mRNA forCu-Zn superoxide dismutase. ).
Length = 153
Score = 216 bits (528), Expect = 3e-56
Identities = 102/154 (66%), Positives = 119/154 (77%)
Frame = +3
Query: 156 MPAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAG 335
M KAVCV+ G GTVFF+Q+ +PV VSG V GL KG HGFHVHEFGDNTNGC S+G
Sbjct: 1 MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60
Query: 336 AHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVH 515
HFNP ++HG P RH+GDLGNIEA D TKV+I DS+I+L G +SIIGRT+VVH
Sbjct: 61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDC-PTKVNITDSKITLFGADSIIGRTVVVH 119
Query: 516 ADPDDLGLGGNELSKTTGNAGGRIACGVIGLAKI 617
AD DDLG GG+ELSK+TGNAG RI CGVIG+AK+
Sbjct: 120 ADADDLGQGGHELSKSTGNAGARIGCGVIGIAKV 153
>X13780-1|CAA32028.1| 153|Drosophila melanogaster Cu-Zn superoxide
dismutase protein.
Length = 153
Score = 216 bits (528), Expect = 3e-56
Identities = 102/154 (66%), Positives = 119/154 (77%)
Frame = +3
Query: 156 MPAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAG 335
M KAVCV+ G GTVFF+Q+ +PV VSG V GL KG HGFHVHEFGDNTNGC S+G
Sbjct: 1 MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60
Query: 336 AHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVH 515
HFNP ++HG P RH+GDLGNIEA D TKV+I DS+I+L G +SIIGRT+VVH
Sbjct: 61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDC-PTKVNITDSKITLFGADSIIGRTVVVH 119
Query: 516 ADPDDLGLGGNELSKTTGNAGGRIACGVIGLAKI 617
AD DDLG GG+ELSK+TGNAG RI CGVIG+AK+
Sbjct: 120 ADADDLGQGGHELSKSTGNAGARIGCGVIGIAKV 153
>M24421-1|AAA28906.1| 153|Drosophila melanogaster Cu/Zn-superoxide
dismutase protein.
Length = 153
Score = 216 bits (528), Expect = 3e-56
Identities = 102/154 (66%), Positives = 119/154 (77%)
Frame = +3
Query: 156 MPAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAG 335
M KAVCV+ G GTVFF+Q+ +PV VSG V GL KG HGFHVHEFGDNTNGC S+G
Sbjct: 1 MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60
Query: 336 AHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVH 515
HFNP ++HG P RH+GDLGNIEA D TKV+I DS+I+L G +SIIGRT+VVH
Sbjct: 61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDC-PTKVNITDSKITLFGADSIIGRTVVVH 119
Query: 516 ADPDDLGLGGNELSKTTGNAGGRIACGVIGLAKI 617
AD DDLG GG+ELSK+TGNAG RI CGVIG+AK+
Sbjct: 120 ADADDLGQGGHELSKSTGNAGARIGCGVIGIAKV 153
>AY071435-1|AAL49057.1| 153|Drosophila melanogaster RE52090p
protein.
Length = 153
Score = 216 bits (528), Expect = 3e-56
Identities = 102/154 (66%), Positives = 119/154 (77%)
Frame = +3
Query: 156 MPAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAG 335
M KAVCV+ G GTVFF+Q+ +PV VSG V GL KG HGFHVHEFGDNTNGC S+G
Sbjct: 1 MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60
Query: 336 AHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVH 515
HFNP ++HG P RH+GDLGNIEA D TKV+I DS+I+L G +SIIGRT+VVH
Sbjct: 61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDC-PTKVNITDSKITLFGADSIIGRTVVVH 119
Query: 516 ADPDDLGLGGNELSKTTGNAGGRIACGVIGLAKI 617
AD DDLG GG+ELSK+TGNAG RI CGVIG+AK+
Sbjct: 120 ADADDLGQGGHELSKSTGNAGARIGCGVIGIAKV 153
>AE014296-1904|AAF50095.1| 153|Drosophila melanogaster CG11793-PA
protein.
Length = 153
Score = 216 bits (528), Expect = 3e-56
Identities = 102/154 (66%), Positives = 119/154 (77%)
Frame = +3
Query: 156 MPAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAG 335
M KAVCV+ G GTVFF+Q+ +PV VSG V GL KG HGFHVHEFGDNTNGC S+G
Sbjct: 1 MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60
Query: 336 AHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVH 515
HFNP ++HG P RH+GDLGNIEA D TKV+I DS+I+L G +SIIGRT+VVH
Sbjct: 61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDC-PTKVNITDSKITLFGADSIIGRTVVVH 119
Query: 516 ADPDDLGLGGNELSKTTGNAGGRIACGVIGLAKI 617
AD DDLG GG+ELSK+TGNAG RI CGVIG+AK+
Sbjct: 120 ADADDLGQGGHELSKSTGNAGARIGCGVIGIAKV 153
>X17332-1|CAA35210.1| 153|Drosophila melanogaster Cu-Zn superoxide
dismutase protein.
Length = 153
Score = 216 bits (527), Expect = 3e-56
Identities = 102/154 (66%), Positives = 118/154 (76%)
Frame = +3
Query: 156 MPAKAVCVLRGAVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAG 335
M KAVCV+ G GTVFF+Q+ +PV VSG V GL KG HGFHVHEFGDNTNGC S+G
Sbjct: 1 MVVKAVCVINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSG 60
Query: 336 AHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVH 515
HFNP ++HG P RH+GDLGNIEA D TKV I DS+I+L G +SIIGRT+VVH
Sbjct: 61 PHFNPYGKEHGAPVDENRHLGDLGNIEATGDC-PTKVKITDSKITLFGADSIIGRTVVVH 119
Query: 516 ADPDDLGLGGNELSKTTGNAGGRIACGVIGLAKI 617
AD DDLG GG+ELSK+TGNAG RI CGVIG+AK+
Sbjct: 120 ADADDLGQGGHELSKSTGNAGARIGCGVIGIAKV 153
>S72589-1|AAD14963.2| 146|Drosophila melanogaster slow superoxide
dismutase protein.
Length = 146
Score = 206 bits (502), Expect = 4e-53
Identities = 97/147 (65%), Positives = 113/147 (76%)
Frame = +3
Query: 177 VLRGAVSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEK 356
V+ G GTVFF+Q+ +PV VSG V GL KG HGFHVHEFGDNTNGC S+G HFNP
Sbjct: 1 VINGDAKGTVFFEQESSGTPVKVSGEVCGLAKGLHGFHVHEFGDNTNGCMSSGPHFNPYG 60
Query: 357 QDHGGPSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLG 536
++HG P RH+GDLGNIEA D TKV I DS+I+L G +SIIGRT+VVHAD DDLG
Sbjct: 61 KEHGAPVDENRHLGDLGNIEATGDC-PTKVKITDSKITLFGADSIIGRTVVVHADADDLG 119
Query: 537 LGGNELSKTTGNAGGRIACGVIGLAKI 617
GG+ELSK+TGNAG RI CGVIG+AK+
Sbjct: 120 QGGHELSKSTGNAGARIGCGVIGIAKV 146
>BT015997-1|AAV36882.1| 250|Drosophila melanogaster RE42883p
protein.
Length = 250
Score = 168 bits (409), Expect = 7e-42
Identities = 89/179 (49%), Positives = 111/179 (62%), Gaps = 7/179 (3%)
Frame = +3
Query: 93 FLIFNLFSSCSPLNLTSSNLTMPAKAVCVLRGAVS-------GTVFFDQQXXKSPVVVSG 251
+L+ +L + C+ + + MP +A+ L G V G V F Q V V
Sbjct: 37 YLVVSL-ALCATICSAAQTRNMPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRV 95
Query: 252 XVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDA 431
++GL +GKHGFH+HE GD TNGC S GAH+NP+K DHGGP VRHVGDLGN+EA
Sbjct: 96 QLEGLKEGKHGFHIHEKGDLTNGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEA-NST 154
Query: 432 GVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
G+ V+ D I+L G IIGR +VVH DDLGLG + SK TGNAGGRIACGVIG+
Sbjct: 155 GIIDVTYTDQVITLTGKLGIIGRGVVVHELEDDLGLGNHTDSKKTGNAGGRIACGVIGI 213
>BT003225-1|AAO24980.1| 181|Drosophila melanogaster LP09315p
protein.
Length = 181
Score = 168 bits (409), Expect = 7e-42
Identities = 89/179 (49%), Positives = 111/179 (62%), Gaps = 7/179 (3%)
Frame = +3
Query: 93 FLIFNLFSSCSPLNLTSSNLTMPAKAVCVLRGAVS-------GTVFFDQQXXKSPVVVSG 251
+L+ +L + C+ + + MP +A+ L G V G V F Q V V
Sbjct: 4 YLVVSL-ALCATICSAAQTRNMPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRV 62
Query: 252 XVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDA 431
++GL +GKHGFH+HE GD TNGC S GAH+NP+K DHGGP VRHVGDLGN+EA
Sbjct: 63 QLEGLKEGKHGFHIHEKGDLTNGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEA-NST 121
Query: 432 GVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
G+ V+ D I+L G IIGR +VVH DDLGLG + SK TGNAGGRIACGVIG+
Sbjct: 122 GIIDVTYTDQVITLTGKLGIIGRGVVVHELEDDLGLGNHTDSKKTGNAGGRIACGVIGI 180
>AY060339-1|AAL25378.1| 188|Drosophila melanogaster GH23708p
protein.
Length = 188
Score = 168 bits (409), Expect = 7e-42
Identities = 89/179 (49%), Positives = 111/179 (62%), Gaps = 7/179 (3%)
Frame = +3
Query: 93 FLIFNLFSSCSPLNLTSSNLTMPAKAVCVLRGAVS-------GTVFFDQQXXKSPVVVSG 251
+L+ +L + C+ + + MP +A+ L G V G V F Q V V
Sbjct: 11 YLVVSL-ALCATICSAAQTRNMPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRV 69
Query: 252 XVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDA 431
++GL +GKHGFH+HE GD TNGC S GAH+NP+K DHGGP VRHVGDLGN+EA
Sbjct: 70 QLEGLKEGKHGFHIHEKGDLTNGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEA-NST 128
Query: 432 GVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
G+ V+ D I+L G IIGR +VVH DDLGLG + SK TGNAGGRIACGVIG+
Sbjct: 129 GIIDVTYTDQVITLTGKLGIIGRGVVVHELEDDLGLGNHTDSKKTGNAGGRIACGVIGI 187
>AE013599-1300|AAG22285.1| 181|Drosophila melanogaster CG9027-PB,
isoform B protein.
Length = 181
Score = 168 bits (409), Expect = 7e-42
Identities = 89/179 (49%), Positives = 111/179 (62%), Gaps = 7/179 (3%)
Frame = +3
Query: 93 FLIFNLFSSCSPLNLTSSNLTMPAKAVCVLRGAVS-------GTVFFDQQXXKSPVVVSG 251
+L+ +L + C+ + + MP +A+ L G V G V F Q V V
Sbjct: 4 YLVVSL-ALCATICSAAQTRNMPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRV 62
Query: 252 XVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDA 431
++GL +GKHGFH+HE GD TNGC S GAH+NP+K DHGGP VRHVGDLGN+EA
Sbjct: 63 QLEGLKEGKHGFHIHEKGDLTNGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEA-NST 121
Query: 432 GVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
G+ V+ D I+L G IIGR +VVH DDLGLG + SK TGNAGGRIACGVIG+
Sbjct: 122 GIIDVTYTDQVITLTGKLGIIGRGVVVHELEDDLGLGNHTDSKKTGNAGGRIACGVIGI 180
>AE013599-1299|AAF58647.3| 181|Drosophila melanogaster CG9027-PA,
isoform A protein.
Length = 181
Score = 168 bits (409), Expect = 7e-42
Identities = 89/179 (49%), Positives = 111/179 (62%), Gaps = 7/179 (3%)
Frame = +3
Query: 93 FLIFNLFSSCSPLNLTSSNLTMPAKAVCVLRGAVS-------GTVFFDQQXXKSPVVVSG 251
+L+ +L + C+ + + MP +A+ L G V G V F Q V V
Sbjct: 4 YLVVSL-ALCATICSAAQTRNMPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRV 62
Query: 252 XVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDA 431
++GL +GKHGFH+HE GD TNGC S GAH+NP+K DHGGP VRHVGDLGN+EA
Sbjct: 63 QLEGLKEGKHGFHIHEKGDLTNGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEA-NST 121
Query: 432 GVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
G+ V+ D I+L G IIGR +VVH DDLGLG + SK TGNAGGRIACGVIG+
Sbjct: 122 GIIDVTYTDQVITLTGKLGIIGRGVVVHELEDDLGLGNHTDSKKTGNAGGRIACGVIGI 180
>AE013599-1298|AAM68736.1| 188|Drosophila melanogaster CG9027-PC,
isoform C protein.
Length = 188
Score = 168 bits (409), Expect = 7e-42
Identities = 89/179 (49%), Positives = 111/179 (62%), Gaps = 7/179 (3%)
Frame = +3
Query: 93 FLIFNLFSSCSPLNLTSSNLTMPAKAVCVLRGAVS-------GTVFFDQQXXKSPVVVSG 251
+L+ +L + C+ + + MP +A+ L G V G V F Q V V
Sbjct: 11 YLVVSL-ALCATICSAAQTRNMPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRV 69
Query: 252 XVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDA 431
++GL +GKHGFH+HE GD TNGC S GAH+NP+K DHGGP VRHVGDLGN+EA
Sbjct: 70 QLEGLKEGKHGFHIHEKGDLTNGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEA-NST 128
Query: 432 GVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
G+ V+ D I+L G IIGR +VVH DDLGLG + SK TGNAGGRIACGVIG+
Sbjct: 129 GIIDVTYTDQVITLTGKLGIIGRGVVVHELEDDLGLGNHTDSKKTGNAGGRIACGVIGI 187
>AE013599-1297|ABI31086.1| 217|Drosophila melanogaster CG9027-PD,
isoform D protein.
Length = 217
Score = 168 bits (409), Expect = 7e-42
Identities = 89/179 (49%), Positives = 111/179 (62%), Gaps = 7/179 (3%)
Frame = +3
Query: 93 FLIFNLFSSCSPLNLTSSNLTMPAKAVCVLRGAVS-------GTVFFDQQXXKSPVVVSG 251
+L+ +L + C+ + + MP +A+ L G V G V F Q V V
Sbjct: 4 YLVVSL-ALCATICSAAQTRNMPIQAIAYLIGPVQSDNTQVKGNVTFTQNDCGQNVHVRV 62
Query: 252 XVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDA 431
++GL +GKHGFH+HE GD TNGC S GAH+NP+K DHGGP VRHVGDLGN+EA
Sbjct: 63 QLEGLKEGKHGFHIHEKGDLTNGCISMGAHYNPDKVDHGGPDHEVRHVGDLGNLEA-NST 121
Query: 432 GVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGGRIACGVIGL 608
G+ V+ D I+L G IIGR +VVH DDLGLG + SK TGNAGGRIACGVIG+
Sbjct: 122 GIIDVTYTDQVITLTGKLGIIGRGVVVHELEDDLGLGNHTDSKKTGNAGGRIACGVIGI 180
>AY026866-1|AAK07691.1| 264|Drosophila melanogaster Cu-chaperone
for superoxide dismutaseprotein.
Length = 264
Score = 120 bits (289), Expect = 2e-27
Identities = 61/127 (48%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Frame = +3
Query: 228 KSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAV--RHVGD 401
K VVV G V GL+ G HG H+HE GD + GC+S G H+NP + HG P++ RH GD
Sbjct: 104 KPGVVVDGVVDGLSPGLHGLHIHESGDTSAGCSSVGEHYNPRQSPHGSPAAGAEERHAGD 163
Query: 402 LGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGG 581
LGNI A E+ T D + + IIGR +V+ A+ DDLG GGN+ S GN+G
Sbjct: 164 LGNIRADENGRAT-FRFVDPVLEVW---DIIGRAVVLTANADDLGRGGNDQSLIDGNSGE 219
Query: 582 RIACGVI 602
RIACG+I
Sbjct: 220 RIACGII 226
>AE013599-1034|AAF58838.1| 264|Drosophila melanogaster CG17753-PA
protein.
Length = 264
Score = 120 bits (289), Expect = 2e-27
Identities = 61/127 (48%), Positives = 78/127 (61%), Gaps = 2/127 (1%)
Frame = +3
Query: 228 KSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAV--RHVGD 401
K VVV G V GL+ G HG H+HE GD + GC+S G H+NP + HG P++ RH GD
Sbjct: 104 KPGVVVDGVVDGLSPGLHGLHIHESGDTSAGCSSVGEHYNPRQSPHGSPAAGAEERHAGD 163
Query: 402 LGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGNELSKTTGNAGG 581
LGNI A E+ T D + + IIGR +V+ A+ DDLG GGN+ S GN+G
Sbjct: 164 LGNIRADENGRAT-FRFVDPVLEVW---DIIGRAVVLTANADDLGRGGNDQSLIDGNSGE 219
Query: 582 RIACGVI 602
RIACG+I
Sbjct: 220 RIACGII 226
>BT023314-1|AAY55730.1| 171|Drosophila melanogaster IP10146p
protein.
Length = 171
Score = 65.7 bits (153), Expect = 7e-11
Identities = 40/119 (33%), Positives = 60/119 (50%)
Frame = +3
Query: 192 VSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGG 371
V+G + F Q S + V+ V GL GKH H+H FGD ++GC S G F
Sbjct: 9 VAGMISFVQLPYNSDIRVTINVTGLPPGKHALHIHTFGDLSDGCKSTGGQF--------- 59
Query: 372 PSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGN 548
P++ LGN++ +D ++ V Q + L G N I+GR++V+H+ DL N
Sbjct: 60 PNNF------LGNVDTKDDGSISAV-FQSIYLQLFGINGIVGRSIVIHSKAIDLNTALN 111
>AE014297-3873|AAF56526.1| 270|Drosophila melanogaster CG5948-PA
protein.
Length = 270
Score = 65.7 bits (153), Expect = 7e-11
Identities = 40/119 (33%), Positives = 60/119 (50%)
Frame = +3
Query: 192 VSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGG 371
V+G + F Q S + V+ V GL GKH H+H FGD ++GC S G F
Sbjct: 108 VAGMISFVQLPYNSDIRVTINVTGLPPGKHALHIHTFGDLSDGCKSTGGQF--------- 158
Query: 372 PSSAVRHVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPDDLGLGGN 548
P++ LGN++ +D ++ V Q + L G N I+GR++V+H+ DL N
Sbjct: 159 PNNF------LGNVDTKDDGSISAV-FQSIYLQLFGINGIVGRSIVIHSKAIDLNTALN 210
>M18823-1|AAA28905.1| 32|Drosophila melanogaster protein (
D.melanogaster superoxidedismutase gene (SOD), partial
cds. ).
Length = 32
Score = 43.2 bits (97), Expect = 4e-04
Identities = 20/28 (71%), Positives = 24/28 (85%)
Frame = +3
Query: 438 TKVSIQDSQISLHGPNSIIGRTLVVHAD 521
TKV I DS+I+L G +SIIGRT+VVHAD
Sbjct: 4 TKVKITDSKITLFGADSIIGRTVVVHAD 31
>AE014297-2908|AAF55834.2| 4496|Drosophila melanogaster CG3723-PA
protein.
Length = 4496
Score = 33.5 bits (73), Expect = 0.35
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Frame = +1
Query: 298 NLVTTQTVAHQLELISTLKNKIMVVPVLLYAMSAISVTLRQLKTL----ESLKYQSKIPR 465
NL+T++ +AH LE +ST +NK+M+ ++ + T L+++ E ++ Q +
Sbjct: 1491 NLITSKYIAHFLEEVSTWQNKLMIADQVITVWFEVQRTWTHLESIFMSSEDIRKQLPVDS 1550
Query: 466 SLFMDLTASLVAL 504
F ++ A L
Sbjct: 1551 DRFDNIDAEFRVL 1563
>BT011091-1|AAR82757.1| 1199|Drosophila melanogaster RE50384p protein.
Length = 1199
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 372 PSSAVR-HVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPD 527
P + +R +VGD+G D G +V + DS L P IGR++V+ PD
Sbjct: 988 PDNPLRCYVGDVGARLGTIDLGGERVVLTDSNFPLEAPVGAIGRSIVIFG-PD 1039
Score = 29.5 bits (63), Expect = 5.6
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Frame = +3
Query: 192 VSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTN---GCTSAG--AHFNP-E 353
VSG V QQ V ++GL + G+++H N C ++ H+NP +
Sbjct: 742 VSGRVEITQQSEYDVSNVEVQLKGL-QDNTGYYIHRTPVEANLAFPCEASTLYGHWNPFD 800
Query: 354 KQDHGGP-----SSAVRHVGDL-GNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVV 512
P ++ +GDL G +E + + D+ + L G NSIIGR++V+
Sbjct: 801 VSPKSSPPPKRGTTDQYEMGDLSGKFGGLEGVTQFEDAYNDTNLPLFGYNSIIGRSVVI 859
>AE014297-4552|AAN14221.1| 1109|Drosophila melanogaster CG31028-PB,
isoform B protein.
Length = 1109
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 372 PSSAVR-HVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPD 527
P + +R +VGD+G D G +V + DS L P IGR++V+ PD
Sbjct: 955 PDNPLRCYVGDVGARLGTIDLGGERVVLTDSNFPLEAPVGAIGRSIVIFG-PD 1006
Score = 29.5 bits (63), Expect = 5.6
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Frame = +3
Query: 192 VSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTN---GCTSAG--AHFNP-E 353
VSG V QQ V ++GL + G+++H N C ++ H+NP +
Sbjct: 709 VSGRVEITQQSEYDVSNVEVQLKGL-QDNTGYYIHRTPVEANLAFPCEASTLYGHWNPFD 767
Query: 354 KQDHGGP-----SSAVRHVGDL-GNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVV 512
P ++ +GDL G +E + + D+ + L G NSIIGR++V+
Sbjct: 768 VSPKSSPPPKRGTTDQYEMGDLSGKFGGLEGVTQFEDAYNDTNLPLFGYNSIIGRSVVI 826
>AE014297-4551|AAF57015.4| 1097|Drosophila melanogaster CG31028-PA,
isoform A protein.
Length = 1097
Score = 31.9 bits (69), Expect = 1.1
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 372 PSSAVR-HVGDLGNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVVHADPD 527
P + +R +VGD+G D G +V + DS L P IGR++V+ PD
Sbjct: 943 PDNPLRCYVGDVGARLGTIDLGGERVVLTDSNFPLEAPVGAIGRSIVIFG-PD 994
Score = 29.5 bits (63), Expect = 5.6
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Frame = +3
Query: 192 VSGTVFFDQQXXKSPVVVSGXVQGLTKGKHGFHVHEFGDNTN---GCTSAG--AHFNP-E 353
VSG V QQ V ++GL + G+++H N C ++ H+NP +
Sbjct: 697 VSGRVEITQQSEYDVSNVEVQLKGL-QDNTGYYIHRTPVEANLAFPCEASTLYGHWNPFD 755
Query: 354 KQDHGGP-----SSAVRHVGDL-GNIEAIEDAGVTKVSIQDSQISLHGPNSIIGRTLVV 512
P ++ +GDL G +E + + D+ + L G NSIIGR++V+
Sbjct: 756 VSPKSSPPPKRGTTDQYEMGDLSGKFGGLEGVTQFEDAYNDTNLPLFGYNSIIGRSVVI 814
>AY070526-1|AAL47997.1| 647|Drosophila melanogaster GH27708p
protein.
Length = 647
Score = 30.3 bits (65), Expect = 3.2
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -2
Query: 399 RRHGVQQNWDHHDLVFQG*NELQLMCNRLCCHQIRAHGNRVYP*SSPGPLQKQQQVTXXP 220
++H Q + HH V Q + Q ++ HQ + HG+ ++P + Q+QQQ P
Sbjct: 137 QQHLQQHHQAHHQHVLQQQQQQQQQHSQHQ-HQQQHHGHPLHPHHTHQQQQQQQQQQQPP 195
Query: 219 ADRRKQXR*QH 187
+Q + QH
Sbjct: 196 PQHHQQQQQQH 206
>AE014296-1332|AAN12025.1| 647|Drosophila melanogaster CG17888-PD,
isoform D protein.
Length = 647
Score = 30.3 bits (65), Expect = 3.2
Identities = 20/71 (28%), Positives = 34/71 (47%)
Frame = -2
Query: 399 RRHGVQQNWDHHDLVFQG*NELQLMCNRLCCHQIRAHGNRVYP*SSPGPLQKQQQVTXXP 220
++H Q + HH V Q + Q ++ HQ + HG+ ++P + Q+QQQ P
Sbjct: 137 QQHLQQHHQAHHQHVLQQQQQQQQQHSQHQ-HQQQHHGHPLHPHHTHQQQQQQQQQQQPP 195
Query: 219 ADRRKQXR*QH 187
+Q + QH
Sbjct: 196 PQHHQQQQQQH 206
>EF596938-1|ABQ96635.1| 178|Drosophila melanogaster SNMP1 protein.
Length = 178
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 321 CTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIE 425
C S GA++ + HG PS +R+ DLG+I A E
Sbjct: 105 CRSLGAYYQHKSSYHGMPS--MRYTLDLGDIRADE 137
>EF560171-1|ABQ42605.1| 162|Drosophila melanogaster SNMP1 protein.
Length = 162
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 321 CTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIE 425
C S GA++ + HG PS +R+ DLG+I A E
Sbjct: 105 CRSLGAYYQHKSSYHGMPS--MRYTLDLGDIRADE 137
>EF560170-1|ABQ42604.1| 144|Drosophila melanogaster SNMP1 protein.
Length = 144
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 321 CTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIE 425
C S GA++ + HG PS +R+ DLG+I A E
Sbjct: 71 CRSLGAYYQHKSSYHGMPS--MRYTLDLGDIRADE 103
>BT024286-1|ABC86348.1| 551|Drosophila melanogaster IP13851p
protein.
Length = 551
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 321 CTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIE 425
C S GA++ + HG PS +R+ DLG+I A E
Sbjct: 294 CRSLGAYYQHKSSYHGMPS--MRYTLDLGDIRADE 326
>AY060935-1|AAL28483.1| 360|Drosophila melanogaster GM07741p
protein.
Length = 360
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 573 HYQWSYLAHCHRVPSHQGQHGQLKCDQ*CC*VHEE 469
H AH PS G +CD CC +HEE
Sbjct: 135 HVHTPECAHHAHTPSRAGSPSTTECDFHCCALHEE 169
>AY060400-1|AAL25439.1| 482|Drosophila melanogaster LD32009p
protein.
Length = 482
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 573 HYQWSYLAHCHRVPSHQGQHGQLKCDQ*CC*VHEE 469
H AH PS G +CD CC +HEE
Sbjct: 257 HVHTPECAHHAHTPSRAGSPSTTECDFHCCALHEE 291
>AL031128-1|CAA20006.1| 5327|Drosophila melanogaster EG:49E4.1
protein.
Length = 5327
Score = 29.1 bits (62), Expect = 7.4
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 280 TVSMCTNLVTTQTV-AHQLELISTLKNKIMVVPVLLYAMSAISVTLRQLKTLESLKYQSK 456
T S+ +L TT+TV Q+E S+ ++ V S +V LR+ T ESL K
Sbjct: 4348 TESLLHSLTTTETVETKQMEEKSSFESVSTSVTKSTVLSSQSTVQLREESTSESLSSSLK 4407
Query: 457 IPRSLFMDLTASLVA 501
+ S + +SL+A
Sbjct: 4408 VEDSSRRESLSSLLA 4422
>AF149795-1|AAF03218.1| 481|Drosophila melanogaster Drep2 protein.
Length = 481
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 573 HYQWSYLAHCHRVPSHQGQHGQLKCDQ*CC*VHEE 469
H AH PS G +CD CC +HEE
Sbjct: 256 HVHTPECAHHAHTPSRAGSPSTTECDFHCCALHEE 290
>AE014298-205|AAF45622.3| 5412|Drosophila melanogaster CG3064-PB
protein.
Length = 5412
Score = 29.1 bits (62), Expect = 7.4
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +1
Query: 280 TVSMCTNLVTTQTV-AHQLELISTLKNKIMVVPVLLYAMSAISVTLRQLKTLESLKYQSK 456
T S+ +L TT+TV Q+E S+ ++ V S +V LR+ T ESL K
Sbjct: 4433 TESLLHSLTTTETVETKQMEEKSSFESVSTSVTKSTVLSSQSTVQLREESTSESLSSSLK 4492
Query: 457 IPRSLFMDLTASLVA 501
+ S + +SL+A
Sbjct: 4493 VEDSSRRESLSSLLA 4507
>AE014297-2947|AAF55863.2| 551|Drosophila melanogaster CG7000-PA
protein.
Length = 551
Score = 29.1 bits (62), Expect = 7.4
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 321 CTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIE 425
C S GA++ + HG PS +R+ DLG+I A E
Sbjct: 294 CRSLGAYYQHKSSYHGMPS--MRYTLDLGDIRADE 326
>AE013599-846|AAF58954.1| 482|Drosophila melanogaster CG1975-PA
protein.
Length = 482
Score = 29.1 bits (62), Expect = 7.4
Identities = 13/35 (37%), Positives = 15/35 (42%)
Frame = -2
Query: 573 HYQWSYLAHCHRVPSHQGQHGQLKCDQ*CC*VHEE 469
H AH PS G +CD CC +HEE
Sbjct: 257 HVHTPECAHHAHTPSRAGSPSTTECDFHCCALHEE 291
>X14569-1|CAA32707.1| 490|Drosophila melanogaster protein (
Drosophila melanogastertwist mRNA. ).
Length = 490
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 597 LHKQYDHQHYQWSYLAHCHRVPSHQGQHGQ 508
+H Y QH Q +H H HQ QH Q
Sbjct: 43 MHSGYQLQHQQQHLHSHQHHQQHHQQQHAQ 72
>X12506-1|CAA31024.1| 490|Drosophila melanogaster twist protein
protein.
Length = 490
Score = 28.7 bits (61), Expect = 9.8
Identities = 12/30 (40%), Positives = 14/30 (46%)
Frame = -2
Query: 597 LHKQYDHQHYQWSYLAHCHRVPSHQGQHGQ 508
+H Y QH Q +H H HQ QH Q
Sbjct: 43 MHSGYQLQHQQQHLHSHQHHQQHHQQQHAQ 72
>AY060413-1|AAL25452.1| 307|Drosophila melanogaster LD36772p
protein.
Length = 307
Score = 28.7 bits (61), Expect = 9.8
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Frame = +3
Query: 255 VQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAG 434
V +T + + H+ N T A AH + H + + HVG G A
Sbjct: 3 VNSMTFRGNPANYHQQQPALNHHTLAAAHHQQQLHHHAAAAGHLSHVG--GGHAASNHLA 60
Query: 435 VTKVSIQDSQISLHGPNSI-IGRTLV-VHADPDDLGLGGNEL-SKTTGNAGG 581
V + HG NS+ G T H+ +G+GG L S +TG +GG
Sbjct: 61 AAAV------LGRHGHNSLGSGHTSTSSHSANVGVGVGGGALASGSTGGSGG 106
>AE013599-3890|AAF47219.1| 307|Drosophila melanogaster CG4612-PA
protein.
Length = 307
Score = 28.7 bits (61), Expect = 9.8
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 3/112 (2%)
Frame = +3
Query: 255 VQGLTKGKHGFHVHEFGDNTNGCTSAGAHFNPEKQDHGGPSSAVRHVGDLGNIEAIEDAG 434
V +T + + H+ N T A AH + H + + HVG G A
Sbjct: 3 VNSMTFRGNPANYHQQQPALNHHTLAAAHHQQQLHHHAAAAGHLSHVG--GGHAASNHLA 60
Query: 435 VTKVSIQDSQISLHGPNSI-IGRTLV-VHADPDDLGLGGNEL-SKTTGNAGG 581
V + HG NS+ G T H+ +G+GG L S +TG +GG
Sbjct: 61 AAAV------LGRHGHNSLGSGHTSTSSHSANVGVGVGGGALASGSTGGSGG 106
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,907,335
Number of Sequences: 53049
Number of extensions: 680796
Number of successful extensions: 2154
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1958
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2129
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3757402116
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -