Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_O07
(577 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U21320-3|AAA62532.1| 436|Caenorhabditis elegans Hypothetical pr... 124 5e-29
U21320-4|AAM54175.1| 188|Caenorhabditis elegans Hypothetical pr... 69 2e-12
Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical pr... 33 0.19
Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical pr... 33 0.19
U64846-2|AAG24112.1| 332|Caenorhabditis elegans Serpentine rece... 31 0.59
Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical pr... 29 1.8
Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z79639-3|CAB01918.1| 385|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical pr... 29 2.4
U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical pr... 29 2.4
U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical pr... 29 2.4
U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 28 5.5
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 28 5.5
AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered cut... 28 5.5
AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered cut... 28 5.5
AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans trithorax-rel... 27 7.2
AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical ... 27 7.2
AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell... 27 7.2
AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of e... 27 7.2
Z81554-4|CAB04511.1| 231|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z71265-4|CAA95833.1| 417|Caenorhabditis elegans Hypothetical pr... 27 9.5
Z66511-4|CAA91316.1| 813|Caenorhabditis elegans Hypothetical pr... 27 9.5
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 27 9.5
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 27 9.5
AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna repl... 27 9.5
>U21320-3|AAA62532.1| 436|Caenorhabditis elegans Hypothetical
protein K04G7.4a protein.
Length = 436
Score = 124 bits (299), Expect = 5e-29
Identities = 61/140 (43%), Positives = 87/140 (62%)
Frame = +1
Query: 157 FDYVNKDYTWLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANM 336
+DY + + ++ L D T F NSK+I+VEG + +GKT A LAD LG HFPE M
Sbjct: 47 WDYKHNGFNYIDGLKDDTRSHFHQNSKLIVVEGNIGSGKTTLAKQLADQLGFVHFPEFRM 106
Query: 337 DLHYIRPNGVDLRSFDDQVPEDTRTFDHVNFNQNPNHRLAANFQIMMYVARYSQYIDALA 516
D + G DLR++ ++ P R D F +NP+ L+A Q ++ R+ QY++ALA
Sbjct: 107 DDILVDRYGNDLRNYYNKFPARYRLPDISMFYKNPSGELSAAMQDRIFNCRFDQYLNALA 166
Query: 517 HLFNTGQGIVLERSPYSDXV 576
H+ NTGQG+VLER+P+SD V
Sbjct: 167 HILNTGQGVVLERTPHSDFV 186
>U21320-4|AAM54175.1| 188|Caenorhabditis elegans Hypothetical
protein K04G7.4b protein.
Length = 188
Score = 68.9 bits (161), Expect = 2e-12
Identities = 34/86 (39%), Positives = 50/86 (58%)
Frame = +1
Query: 157 FDYVNKDYTWLRSLIDRTTHRFDDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANM 336
+DY + + ++ L D T F NSK+I+VEG + +GKT A LAD LG HFPE M
Sbjct: 47 WDYKHNGFNYIDGLKDDTRSHFHQNSKLIVVEGNIGSGKTTLAKQLADQLGFVHFPEFRM 106
Query: 337 DLHYIRPNGVDLRSFDDQVPEDTRTF 414
D + G DLR++ +++ +TF
Sbjct: 107 DDILVDRYGNDLRNYYNKLVTVFQTF 132
>Z75952-5|CAB00093.2| 149|Caenorhabditis elegans Hypothetical
protein F29D10.2 protein.
Length = 149
Score = 32.7 bits (71), Expect = 0.19
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 250 PRLSLCCYHQTCGSCGRLSCATKCSPC 170
PR CC + C +C R C T+C C
Sbjct: 71 PRCCCCCRPKCCCTCCRTCCCTRCCTC 97
>Z49886-6|CAI79131.1| 149|Caenorhabditis elegans Hypothetical
protein C06A1.7 protein.
Length = 149
Score = 32.7 bits (71), Expect = 0.19
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 250 PRLSLCCYHQTCGSCGRLSCATKCSPC 170
PR CC + C +C R C T+C C
Sbjct: 73 PRCCCCCRPKCCCTCCRTCCCTRCCTC 99
>Z49886-5|CAA90055.1| 152|Caenorhabditis elegans Hypothetical
protein C06A1.6 protein.
Length = 152
Score = 32.7 bits (71), Expect = 0.19
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 250 PRLSLCCYHQTCGSCGRLSCATKCSPC 170
PR CC + C +C R C T+C C
Sbjct: 76 PRCCCCCRPKCCCTCCRTCCCTRCCTC 102
>U64846-2|AAG24112.1| 332|Caenorhabditis elegans Serpentine
receptor, class t protein35 protein.
Length = 332
Score = 31.1 bits (67), Expect = 0.59
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 7/85 (8%)
Frame = -2
Query: 462 VCSQAMVRILIEINMVKGPSVLGYLVVEGPQI-DAVRTNIVQIHVSFGEMLHTQVIG*GG 286
V SQA I + +N V+ P ++ VV G + + V V I++SF +M+ + + G
Sbjct: 251 VASQAAAIIYVVMNFVQVPPIV---VVSGHLLWELVHGAPVFIYISFNDMIRKRFLEIFG 307
Query: 285 CKGGLTSSY---RPF---HDYHFAV 229
CK +T + P HDY F +
Sbjct: 308 CKNVVTPQFVVSPPVVVQHDYTFMI 332
>Z81042-2|CAB02793.1| 458|Caenorhabditis elegans Hypothetical
protein C27H6.2 protein.
Length = 458
Score = 29.5 bits (63), Expect = 1.8
Identities = 10/25 (40%), Positives = 18/25 (72%)
Frame = +1
Query: 235 KVIIVEGPVAAGKTAFAASLADDLG 309
+ +++ GP A GKTA A +++ +LG
Sbjct: 83 RAVLIAGPPATGKTAIALAMSQELG 107
>Z81579-4|CAE17915.1| 212|Caenorhabditis elegans Hypothetical
protein R13H4.8 protein.
Length = 212
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 250 PRLSLCCYHQTCGSCGRLSCATKCSPC 170
PR CC + C +C R C T+C C
Sbjct: 91 PRCCCCC--RRCCTCCRTCCCTRCCTC 115
>Z79639-3|CAB01918.1| 385|Caenorhabditis elegans Hypothetical
protein F54E4.4 protein.
Length = 385
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/30 (43%), Positives = 15/30 (50%), Gaps = 6/30 (20%)
Frame = -1
Query: 241 SLCCYHQTCGSCGR------LSCATKCSPC 170
SLCC+ T G C R L+CA C C
Sbjct: 260 SLCCFWATTGECSRNPFWMKLNCAKTCGTC 289
>Z66499-4|CAA91301.1| 164|Caenorhabditis elegans Hypothetical
protein T01B7.8 protein.
Length = 164
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 250 PRLSLCCYHQTCGSCGRLSCATKCSPC 170
PR CC + C +C R C T+C C
Sbjct: 89 PRCCCCC--RRCCTCCRTCCCTRCCTC 113
>U58760-7|AAK31463.1| 188|Caenorhabditis elegans Hypothetical
protein C27A2.5 protein.
Length = 188
Score = 29.1 bits (62), Expect = 2.4
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 247 RLSLCCYHQTCGSCGRLSCATKCSPC 170
R CC + C +C R C T+C C
Sbjct: 89 RPKCCCCCRRCCTCCRTCCCTRCCTC 114
>U55854-7|AAK68158.1| 166|Caenorhabditis elegans Hypothetical
protein C04G6.10 protein.
Length = 166
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 250 PRLSLCCYHQTCGSCGRLSCATKCSPC 170
PR CC + C +C R C T+C C
Sbjct: 90 PRCCCCC--RRCCTCCRTCCCTRCCTC 114
>U55854-6|AAK68161.1| 197|Caenorhabditis elegans Hypothetical
protein C04G6.7 protein.
Length = 197
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 250 PRLSLCCYHQTCGSCGRLSCATKCSPC 170
PR CC + C +C R C T+C C
Sbjct: 91 PRCCCCC--RRCCTCCRTCCCTRCCTC 115
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 128 YHLLHRNLHPLTMSTRTTLGCAA*STARPTGLMI 229
Y L + L+P+ + R TL C+A T PT L +
Sbjct: 2855 YFLDQQKLYPIILGKRLTLDCSATGTPPPTILFM 2888
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 128 YHLLHRNLHPLTMSTRTTLGCAA*STARPTGLMI 229
Y L + L+P+ + R TL C+A T PT L +
Sbjct: 2855 YFLDQQKLYPIILGKRLTLDCSATGTPPPTILFM 2888
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 128 YHLLHRNLHPLTMSTRTTLGCAA*STARPTGLMI 229
Y L + L+P+ + R TL C+A T PT L +
Sbjct: 2855 YFLDQQKLYPIILGKRLTLDCSATGTPPPTILFM 2888
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 128 YHLLHRNLHPLTMSTRTTLGCAA*STARPTGLMI 229
Y L + L+P+ + R TL C+A T PT L +
Sbjct: 2855 YFLDQQKLYPIILGKRLTLDCSATGTPPPTILFM 2888
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.9 bits (59), Expect = 5.5
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 128 YHLLHRNLHPLTMSTRTTLGCAA*STARPTGLMI 229
Y L + L+P+ + R TL C+A T PT L +
Sbjct: 2855 YFLDQQKLYPIILGKRLTLDCSATGTPPPTILFM 2888
>AF039719-2|AAB96757.1| 827|Caenorhabditis elegans Blistered
cuticle protein 4, isoformc protein.
Length = 827
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = -1
Query: 349 YSANPC*LRGNASYPSHRLGRLQRRSYQQLPALPRLSLCCYHQTC-GSCGRLSCATKCSP 173
YSA P +G S +++ + P L C H C G C S AT C
Sbjct: 637 YSATPATSQGVLSRVHQLTSQVEESAPISFPDLTSAGNC--HDECNGGCTESSSATSCFA 694
Query: 172 C*H 164
C H
Sbjct: 695 CKH 697
>AF039719-1|AAB96754.1| 942|Caenorhabditis elegans Blistered
cuticle protein 4, isoformd protein.
Length = 942
Score = 27.9 bits (59), Expect = 5.5
Identities = 19/63 (30%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = -1
Query: 349 YSANPC*LRGNASYPSHRLGRLQRRSYQQLPALPRLSLCCYHQTC-GSCGRLSCATKCSP 173
YSA P +G S +++ + P L C H C G C S AT C
Sbjct: 637 YSATPATSQGVLSRVHQLTSQVEESAPISFPDLTSAGNC--HDECNGGCTESSSATSCFA 694
Query: 172 C*H 164
C H
Sbjct: 695 CKH 697
>AF163019-1|AAD49324.1| 1312|Caenorhabditis elegans
trithorax-related protein LIN-59 protein.
Length = 1312
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 256 PVAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPED 402
P+++ A +S D G++ P + Y N VD+ DD+ +D
Sbjct: 160 PMSSNAPATTSSATPDSGIQSVPTSPPSPSYAMMNDVDIGDHDDEEDDD 208
>AF043693-4|AAB97538.1| 971|Caenorhabditis elegans Hypothetical
protein C34B2.6 protein.
Length = 971
Score = 27.5 bits (58), Expect = 7.2
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = +1
Query: 235 KVIIVEGPVAAGKTAFAASLADDLGMKHF 321
K++ GP GKT+ A S+A L ++F
Sbjct: 506 KILCFHGPPGVGKTSIAKSIATALNREYF 534
>AF039718-1|AAB96746.1| 1312|Caenorhabditis elegans Abnormal cell
lineage protein 59 protein.
Length = 1312
Score = 27.5 bits (58), Expect = 7.2
Identities = 13/49 (26%), Positives = 23/49 (46%)
Frame = +1
Query: 256 PVAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDLRSFDDQVPED 402
P+++ A +S D G++ P + Y N VD+ DD+ +D
Sbjct: 160 PMSSNAPATTSSATPDSGIQSVPTSPPSPSYAMMNDVDIGDHDDEEDDD 208
>AC025724-1|AAG23375.2| 4177|Caenorhabditis elegans Enhancer of efl-1
mutant phenotypeprotein 1 protein.
Length = 4177
Score = 27.5 bits (58), Expect = 7.2
Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 5/55 (9%)
Frame = -3
Query: 452 KRWLGF*LKLTWSKVLVSSGTWSSKDLKSTPFG-----RI*CKSMLASGKCFIPK 303
+ W +KLT +VSS W +D +S F ++ C+ M + K F K
Sbjct: 1292 EEWCRLAVKLTDRNTIVSSDNWQRRDRQSADFDTNKYLKLVCRDMFNAYKQFFEK 1346
>Z81554-4|CAB04511.1| 231|Caenorhabditis elegans Hypothetical
protein F57G4.9 protein.
Length = 231
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = -2
Query: 513 QSINILTVPGHIHHYLEVCSQAMVRILIEINMV 415
+S++I+ H+H+YL ++ +V + IE NM+
Sbjct: 181 KSVDIILALCHLHNYLIGKAEDVVNVPIETNMI 213
>Z71265-4|CAA95833.1| 417|Caenorhabditis elegans Hypothetical
protein M05B5.4 protein.
Length = 417
Score = 27.1 bits (57), Expect = 9.5
Identities = 11/21 (52%), Positives = 19/21 (90%)
Frame = +1
Query: 187 LRSLIDRTTHRFDDNSKVIIV 249
L+SLI+ TT+R++DN K+++V
Sbjct: 174 LKSLIE-TTYRWNDNQKIVLV 193
>Z66511-4|CAA91316.1| 813|Caenorhabditis elegans Hypothetical
protein F07A11.3 protein.
Length = 813
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/38 (39%), Positives = 24/38 (63%)
Frame = +1
Query: 259 VAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDL 372
+ +G+T+ AA+LA DLGM A + LH + N +D+
Sbjct: 223 IRSGETSKAANLAIDLGMGAI-GAQLQLHSMLRNPLDI 259
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 226 DNSKVIIVEGPVAAGKTAFAASLADDLGM 312
D + IV GP GKT FA ++A +L +
Sbjct: 237 DPPRGFIVHGPPGCGKTMFAQAVAGELAI 265
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 27.1 bits (57), Expect = 9.5
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +1
Query: 226 DNSKVIIVEGPVAAGKTAFAASLADDLGM 312
D + IV GP GKT FA ++A +L +
Sbjct: 237 DPPRGFIVHGPPGCGKTMFAQAVAGELAI 265
>AF036699-3|AAB88360.1| 334|Caenorhabditis elegans Rfc (dna
replication factor) familyprotein 2 protein.
Length = 334
Score = 27.1 bits (57), Expect = 9.5
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 223 DDNSKVIIVEGPVAAGKTAFAASLADDLGMKHFPEANMDLHYIRPNGVDL 372
+ N I++ GP GKT +LA +L EA ++L+ G+D+
Sbjct: 40 EGNVPNIVLSGPPGCGKTTSVWALARELLGDKVKEAVLELNASDERGIDV 89
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,052,462
Number of Sequences: 27780
Number of extensions: 262393
Number of successful extensions: 744
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 696
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 744
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1194789454
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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