Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_O01
(807 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical ... 247 6e-66
AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical ... 247 6e-66
AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical ... 63 3e-10
Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical pr... 37 0.020
U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate dehydro... 37 0.020
L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate dehyd... 37 0.020
Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical pr... 36 0.034
Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical p... 29 3.9
Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical pr... 28 6.8
Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical pr... 28 6.8
AF014940-1|AAB63933.1| 143|Caenorhabditis elegans Hypothetical ... 28 9.0
>AF125955-5|AAO12427.1| 273|Caenorhabditis elegans Hypothetical
protein F46E10.10b protein.
Length = 273
Score = 247 bits (605), Expect = 6e-66
Identities = 122/199 (61%), Positives = 149/199 (74%), Gaps = 1/199 (0%)
Frame = +1
Query: 211 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 390
M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 391 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAA 570
ALP L V+ + + AF + AFLVGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61 ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120
Query: 571 RKDVKVLVVGNPANTNALICSKYAP-SIPKENFTAMTRLDQNRAQSQLAAKIGVPVKDVK 747
+ KV+VVGNPANTNA I +KYA IP +NF+AMTRLD NRA +QLA K G + +VK
Sbjct: 121 KPTTKVIVVGNPANTNAFIAAKYAAGKIPAKNFSAMTRLDHNRALAQLALKTGTTIGNVK 180
Query: 748 RVIIWGNHSSTQXPDASNA 804
VIIWGNHS TQ PD ++A
Sbjct: 181 NVIIWGNHSGTQFPDVTHA 199
>AF125955-3|AAD14720.1| 336|Caenorhabditis elegans Hypothetical
protein F46E10.10a protein.
Length = 336
Score = 247 bits (605), Expect = 6e-66
Identities = 122/199 (61%), Positives = 149/199 (74%), Gaps = 1/199 (0%)
Frame = +1
Query: 211 MAEPIRVVVTGAAGQIAYSLLYQIASGAVFGPQQPVFLHLLDIAPMMGVLEGVVMELADC 390
M+ P+RV+VTGAAGQI YS++ +IA G VFG +QPV L LLD+ +LEGVV EL DC
Sbjct: 1 MSAPLRVLVTGAAGQIGYSIVIRIADGTVFGKEQPVELVLLDVPQCSNILEGVVFELQDC 60
Query: 391 ALPLLAGVLPTANPEEAFKDVAAAFLVGAMPRKEGMERKDLLAANVRIFKEQGQALDKAA 570
ALP L V+ + + AF + AFLVGAMPR+EGMERKDLLAANV+IFK QG+AL + A
Sbjct: 61 ALPTLFSVVAVTDEKSAFTGIDYAFLVGAMPRREGMERKDLLAANVKIFKSQGKALAEYA 120
Query: 571 RKDVKVLVVGNPANTNALICSKYAP-SIPKENFTAMTRLDQNRAQSQLAAKIGVPVKDVK 747
+ KV+VVGNPANTNA I +KYA IP +NF+AMTRLD NRA +QLA K G + +VK
Sbjct: 121 KPTTKVIVVGNPANTNAFIAAKYAAGKIPAKNFSAMTRLDHNRALAQLALKTGTTIGNVK 180
Query: 748 RVIIWGNHSSTQXPDASNA 804
VIIWGNHS TQ PD ++A
Sbjct: 181 NVIIWGNHSGTQFPDVTHA 199
>AF125955-4|AAO12428.1| 181|Caenorhabditis elegans Hypothetical
protein F46E10.10c protein.
Length = 181
Score = 62.9 bits (146), Expect = 3e-10
Identities = 28/44 (63%), Positives = 33/44 (75%)
Frame = +1
Query: 673 MTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSSTQXPDASNA 804
MTRLD NRA +QLA K G + +VK VIIWGNHS TQ PD ++A
Sbjct: 1 MTRLDHNRALAQLALKTGTTIGNVKNVIIWGNHSGTQFPDVTHA 44
>Z49127-1|CAA88944.1| 333|Caenorhabditis elegans Hypothetical
protein F13D12.2 protein.
Length = 333
Score = 36.7 bits (81), Expect = 0.020
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 484 RKEGMERKDLLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN 663
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 664 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 780
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>U15420-1|AAA67063.1| 333|Caenorhabditis elegans lactate
dehydrogenase protein.
Length = 333
Score = 36.7 bits (81), Expect = 0.020
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 484 RKEGMERKDLLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN 663
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 664 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 780
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>L43563-1|AAC41613.1| 333|Caenorhabditis elegans L-lactate
dehydrogenase protein.
Length = 333
Score = 36.7 bits (81), Expect = 0.020
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 1/100 (1%)
Frame = +1
Query: 484 RKEGMERKDLLAANVRIFKEQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKEN 663
++EG R L+ NV IFK L K + D +LVV NP + + K + +P+E
Sbjct: 100 QREGETRLSLVQRNVEIFKGIIPQLVKYS-PDTCILVVSNPVDVLTYVTWKLS-GLPRER 157
Query: 664 -FTAMTRLDQNRAQSQLAAKIGVPVKDVKRVIIWGNHSST 780
F + T LD R + L+ K+ + II G H +
Sbjct: 158 VFGSGTNLDSARFRFLLSEKLNIAPSSCHGWII-GEHGDS 196
>Z75545-3|CAA99886.1| 922|Caenorhabditis elegans Hypothetical
protein K10D3.4 protein.
Length = 922
Score = 35.9 bits (79), Expect = 0.034
Identities = 29/79 (36%), Positives = 38/79 (48%), Gaps = 12/79 (15%)
Frame = +3
Query: 219 TYKSCCNWC----CRTNCIL-TSLSN-------CVWSSFWTSTTCLPPPS*YCAYDGCT* 362
TYK C ++C CI T+L++ C SS STTC P + YC YDG T
Sbjct: 453 TYKECQDYCRDARSEPQCIQGTALTDSNGNFIICGGSSA-ASTTC--PANHYCYYDGTTY 509
Query: 363 RCCHGVGRLCSATFGWGSS 419
CC CS ++ G+S
Sbjct: 510 GCCPTQAYTCSLSYKSGAS 528
>Z82271-6|CAB05213.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 541 EQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQLAAK 720
+Q ++ + K V +V P++T + + +A S PK A TRL + S+ +++
Sbjct: 42 DQEDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSSQ 101
>Z73102-19|CAA97421.1| 1091|Caenorhabditis elegans Hypothetical
protein F54E12.2 protein.
Length = 1091
Score = 29.1 bits (62), Expect = 3.9
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 541 EQGQALDKAARKDVKVLVVGNPANTNALICSKYAPSIPKENFTAMTRLDQNRAQSQLAAK 720
+Q ++ + K V +V P++T + + +A S PK A TRL + S+ +++
Sbjct: 42 DQEDSVVDESMKSVNSPIVNTPSSTASHCTNSFATSTPKSKSNASTRLGSSYGSSRSSSQ 101
>Z83107-6|CAD92391.1| 877|Caenorhabditis elegans Hypothetical
protein F32A7.5c protein.
Length = 877
Score = 28.3 bits (60), Expect = 6.8
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = -2
Query: 599 PTTRTFTSLRAA-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 435
P RT RA L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 434 SGFAVGRTPAKSGRAQSANSMTTPSSTP 351
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
>Z83107-5|CAD92390.1| 764|Caenorhabditis elegans Hypothetical
protein F32A7.5b protein.
Length = 764
Score = 28.3 bits (60), Expect = 6.8
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = -2
Query: 599 PTTRTFTSLRAA-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 435
P RT RA L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 434 SGFAVGRTPAKSGRAQSANSMTTPSSTP 351
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
>Z83107-4|CAB05498.1| 878|Caenorhabditis elegans Hypothetical
protein F32A7.5a protein.
Length = 878
Score = 28.3 bits (60), Expect = 6.8
Identities = 27/88 (30%), Positives = 36/88 (40%), Gaps = 5/88 (5%)
Frame = -2
Query: 599 PTTRTFTSLRAA-LSKAWPCS-LKMRTLAARRSFLSIPSFLGIAP---TRKAAATSLKAS 435
P RT RA L+K P S R RS + P P T KA + K +
Sbjct: 288 PAPRTAVPSRATVLTKTAPASKAPTRAPVPARSAPAPPRGAPAKPAANTAKAEPIAQKKT 347
Query: 434 SGFAVGRTPAKSGRAQSANSMTTPSSTP 351
G G P+K A A++ T+P+ P
Sbjct: 348 VGKVQGTAPSKPAPAAPASAATSPAPAP 375
>AF014940-1|AAB63933.1| 143|Caenorhabditis elegans Hypothetical
protein W02D7.3 protein.
Length = 143
Score = 27.9 bits (59), Expect = 9.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = -2
Query: 434 SGFAVGRTPAKSGRAQSANSMTTPSSTPIIGAISRRWRKTGC 309
+ +A +P S ++S S + S+TP A+SRR GC
Sbjct: 71 TNYAKRHSPPPSYSSRSKQSSVSSSATPTKSAVSRRNYLAGC 112
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,957,934
Number of Sequences: 27780
Number of extensions: 374593
Number of successful extensions: 1243
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1238
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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