Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_N24
(813 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P31350 Cluster: Ribonucleoside-diphosphate reductase su... 317 2e-85
UniRef50_Q4TC55 Cluster: Chromosome undetermined SCAF7053, whole... 293 3e-78
UniRef50_P36603 Cluster: Ribonucleoside-diphosphate reductase sm... 240 3e-62
UniRef50_Q5K9L8 Cluster: Ribonucleotide reductase small subunit,... 217 3e-55
UniRef50_Q16J81 Cluster: Putative uncharacterized protein; n=1; ... 190 3e-47
UniRef50_Q5IJA4 Cluster: RR2 protein; n=4; Shrimp white spot syn... 182 7e-45
UniRef50_Q7T6Y9 Cluster: Ribonucleoside-diphosphate reductase sm... 182 7e-45
UniRef50_P49723 Cluster: Ribonucleoside-diphosphate reductase sm... 174 3e-42
UniRef50_A1A6K4 Cluster: At5g40942; n=1; Arabidopsis thaliana|Re... 170 3e-41
UniRef50_P42492 Cluster: Ribonucleoside-diphosphate reductase sm... 168 1e-40
UniRef50_Q54E77 Cluster: Putative uncharacterized protein; n=1; ... 163 5e-39
UniRef50_A7TFJ9 Cluster: Putative uncharacterized protein; n=1; ... 160 4e-38
UniRef50_Q8QNF1 Cluster: EsV-1-128; n=2; Phaeovirus|Rep: EsV-1-1... 149 6e-35
UniRef50_A0EZ20 Cluster: Ribonucleotide reductase small subunit;... 149 1e-34
UniRef50_Q4TH71 Cluster: Chromosome undetermined SCAF3173, whole... 142 9e-33
UniRef50_A7TLQ4 Cluster: Putative uncharacterized protein; n=1; ... 138 1e-31
UniRef50_Q9K3C2 Cluster: Ribonucleotide-diphosphate reductase sm... 116 9e-25
UniRef50_Q6BBQ6 Cluster: Ribonucleotide reductase small subunit;... 99 1e-19
UniRef50_UPI00015BCE4B Cluster: UPI00015BCE4B related cluster; n... 85 2e-15
UniRef50_Q42088 Cluster: Ribonucleotide reductase small subunit;... 85 3e-15
UniRef50_Q6R7K3 Cluster: ORF20; n=1; Ostreid herpesvirus 1|Rep: ... 83 6e-15
UniRef50_A7AR36 Cluster: Ribonucleoside-diphosphate reductase be... 83 8e-15
UniRef50_Q0DD39 Cluster: Os06g0257500 protein; n=1; Oryza sativa... 80 8e-14
UniRef50_Q5CFS5 Cluster: Ribonucleotide reductase small subunit;... 77 7e-13
UniRef50_A7C3B1 Cluster: Ribonucleotide-diphosphate reductase be... 75 2e-12
UniRef50_Q4UJ43 Cluster: Ribonucleoside reductase, putative; n=2... 73 9e-12
UniRef50_A7K7Z4 Cluster: Putative uncharacterized protein z034R;... 71 3e-11
UniRef50_P20561 Cluster: Uncharacterized 11.6 kDa protein; n=4; ... 67 4e-10
UniRef50_A7CVZ4 Cluster: Ribonucleoside-diphosphate reductase; n... 67 6e-10
UniRef50_Q5FPG6 Cluster: Ribonucleoside-diphosphate reductase be... 65 2e-09
UniRef50_A4IY38 Cluster: Biofunctional glutaredoxin 3 protein/Ri... 65 2e-09
UniRef50_Q8VB15 Cluster: Wsv190; n=1; Shrimp white spot syndrome... 64 5e-09
UniRef50_A7IV34 Cluster: Putative uncharacterized protein m654R;... 63 9e-09
UniRef50_O83092 Cluster: Ribonucleoside-diphosphate reductase su... 63 9e-09
UniRef50_Q9HMU4 Cluster: Ribonucleoside reductase small chain; n... 62 2e-08
UniRef50_Q2S729 Cluster: Ribonucleotide reductase, beta subunit;... 61 4e-08
UniRef50_Q89YE6 Cluster: Ribonucleoside-diphosphate reductase be... 60 9e-08
UniRef50_A0Q1D6 Cluster: Ribonucleoside-diphosphate reductase, b... 60 9e-08
UniRef50_Q91FE8 Cluster: 376L; n=1; Invertebrate iridescent viru... 59 1e-07
UniRef50_Q9RZL6 Cluster: Ribonucleoside-diphosphate reductase, b... 58 2e-07
UniRef50_Q6A5Y4 Cluster: Ribonucleoside-diphosphate reductase be... 58 2e-07
UniRef50_Q9Z6S4 Cluster: Ribonucleoside-diphosphate reductase su... 57 6e-07
UniRef50_P20560 Cluster: Uncharacterized 8.3 kDa protein; n=3; O... 56 1e-06
UniRef50_Q81TB4 Cluster: Ribonucleoside-diphosphate reductase, b... 56 1e-06
UniRef50_A7IXG5 Cluster: Putative uncharacterized protein b640L;... 55 2e-06
UniRef50_Q4YZT3 Cluster: Putative uncharacterized protein; n=1; ... 54 3e-06
UniRef50_P37427 Cluster: Ribonucleoside-diphosphate reductase 1 ... 54 3e-06
UniRef50_O67475 Cluster: Ribonucleoside-diphosphate reductase su... 54 3e-06
UniRef50_Q88YQ5 Cluster: Ribonucleoside-diphosphate reductase, b... 53 7e-06
UniRef50_P74732 Cluster: Slr0591 protein; n=9; Bacteria|Rep: Slr... 53 7e-06
UniRef50_Q8TGJ8 Cluster: Uncharacterized protein YJL026C-A; n=2;... 52 1e-05
UniRef50_Q8SCK7 Cluster: PHIKZ305; n=1; Pseudomonas phage phiKZ|... 51 4e-05
UniRef50_A4C9Q5 Cluster: Ribonucleotide-diphosphate reductase be... 50 5e-05
UniRef50_Q1VIC2 Cluster: Ribonucleotide-diphosphate reductase be... 50 9e-05
UniRef50_Q8Y5B3 Cluster: Lmo2154 protein; n=26; Bacteria|Rep: Lm... 49 1e-04
UniRef50_Q678G9 Cluster: Ribonucleotide reductase; n=2; Lymphocy... 48 2e-04
UniRef50_Q9Z5C7 Cluster: Ribonucleotide reductase minor subunit;... 48 3e-04
UniRef50_Q5GQI6 Cluster: Ribonucleotide reductase B subunit; n=3... 46 9e-04
UniRef50_Q7DA78 Cluster: Ribonucleoside-diphosphate reductase, b... 46 0.002
UniRef50_Q8VB16 Cluster: Wsv189; n=1; Shrimp white spot syndrome... 45 0.003
UniRef50_Q8ELX7 Cluster: Ribonucleoside-diphosphate reductase be... 45 0.003
UniRef50_Q01038 Cluster: Ribonucleoside-diphosphate reductase sm... 44 0.003
UniRef50_A7K7Z8 Cluster: Putative uncharacterized protein z038R;... 44 0.006
UniRef50_Q4J6V7 Cluster: Ribonucleoside-diphosphate reductase; n... 43 0.008
UniRef50_Q9KFH7 Cluster: Ribonucleoside-diphosphate reductase su... 43 0.011
UniRef50_A6EC16 Cluster: Ribonucleotide-diphosphate; n=1; Pedoba... 42 0.024
UniRef50_Q6KG86 Cluster: Putative ribonucleoside diphosphate red... 41 0.043
UniRef50_Q4J6S8 Cluster: Ribonucleotide reductase, small chain; ... 41 0.043
UniRef50_A7KUZ8 Cluster: Nrd beta subunit; n=1; Bacillus phage 0... 40 0.075
UniRef50_P50621 Cluster: Ribonucleoside-diphosphate reductase su... 40 0.099
UniRef50_Q5HMW6 Cluster: Ribonucleoside-diphosphate reductase 2,... 39 0.13
UniRef50_P55983 Cluster: Ribonucleoside-diphosphate reductase su... 39 0.13
UniRef50_Q6QGJ3 Cluster: Putative aerobic ribonucleoside diphosp... 39 0.17
UniRef50_Q6BK07 Cluster: Protein STU1; n=2; cellular organisms|R... 39 0.17
UniRef50_UPI00015B5EF5 Cluster: PREDICTED: similar to CG9246-PA;... 38 0.23
UniRef50_Q6QXF7 Cluster: ORF38; n=3; Baculoviridae|Rep: ORF38 - ... 38 0.23
UniRef50_Q4J6S5 Cluster: Putative uncharacterized protein; n=1; ... 38 0.40
UniRef50_A4L226 Cluster: Ribonucleotide reductase small subunit;... 36 1.2
UniRef50_A3I5A8 Cluster: Ribonucleotide-diphosphate; n=1; Bacill... 36 1.6
UniRef50_Q8I385 Cluster: Putative uncharacterized protein PFI031... 35 2.1
UniRef50_UPI000155436B Cluster: hypothetical protein ORF027; n=1... 35 2.8
UniRef50_A5IYM2 Cluster: Putative uncharacterized protein; n=1; ... 35 2.8
UniRef50_A5FCJ5 Cluster: Ribonucleotide reductase; n=1; Flavobac... 35 2.8
UniRef50_P77402 Cluster: Uncharacterized HTH-type transcriptiona... 35 2.8
UniRef50_Q1MP70 Cluster: Putative outer protein N; n=1; Lawsonia... 34 4.9
UniRef50_A6LGQ5 Cluster: Putative Fe-S oxidoreductase; n=1; Para... 34 4.9
UniRef50_A3J9D7 Cluster: TRNA-dihydrouridine synthase A; n=1; Ma... 33 6.5
UniRef50_Q5ZGC8 Cluster: Putative uncharacterized protein; n=1; ... 33 6.5
UniRef50_Q95S88 Cluster: GM05661p; n=4; Sophophora|Rep: GM05661p... 33 6.5
UniRef50_Q8YTL8 Cluster: Sensor protein; n=2; Nostocaceae|Rep: S... 33 8.6
UniRef50_A3XHF9 Cluster: Ribonucleoside-diphosphate reductase, b... 33 8.6
UniRef50_O43272 Cluster: Proline oxidase, mitochondrial precurso... 33 8.6
>UniRef50_P31350 Cluster: Ribonucleoside-diphosphate reductase
subunit M2; n=260; root|Rep: Ribonucleoside-diphosphate
reductase subunit M2 - Homo sapiens (Human)
Length = 389
Score = 317 bits (778), Expect = 2e-85
Identities = 154/248 (62%), Positives = 179/248 (72%), Gaps = 7/248 (2%)
Frame = +2
Query: 89 MAPTVDKENLH----SGINGENRVQTKSPMKNS-VLATKNDNLTEEMDLDKNFEEFDP-- 247
+AP D + L G++ ++ T + + VLA+K + + + P
Sbjct: 8 LAPITDPQQLQLSPLKGLSLVDKENTPPALSGTRVLASKTARRIFQEPTEPKTKAAAPGV 67
Query: 248 QKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFI 427
+ EPLLRENPRRFVIFPI+Y DIWQMYKKAEASFWT EEVDLSKD+ WE+LK ER+FI
Sbjct: 68 EDEPLLRENPRRFVIFPIEYHDIWQMYKKAEASFWTAEEVDLSKDIQHWESLKPEERYFI 127
Query: 428 KHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDP 607
HVLAFFAASDGIVNENLVERFSQEVQ+TEARCFYGFQIAMEN+HSEMYSLLIDTYI+DP
Sbjct: 128 SHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENIHSEMYSLLIDTYIKDP 187
Query: 608 KERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLX 787
KER+FLFNA+ET+PCVKKKADWAL+WI K AT+GER WL
Sbjct: 188 KEREFLFNAIETMPCVKKKADWALRWIGDKEATYGERVVAFAAVEGIFFSGSFASIFWLK 247
Query: 788 KRGLMPGL 811
KRGLMPGL
Sbjct: 248 KRGLMPGL 255
>UniRef50_Q4TC55 Cluster: Chromosome undetermined SCAF7053, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7053,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 369
Score = 293 bits (719), Expect = 3e-78
Identities = 130/156 (83%), Positives = 145/156 (92%)
Frame = +2
Query: 251 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIK 430
+EPLL+ENPRRFVIFPIQY D+WQMYKKAEASFWT EEVDLSKDL WE+LKD ER FI
Sbjct: 1 EEPLLKENPRRFVIFPIQYQDLWQMYKKAEASFWTAEEVDLSKDLQHWESLKDDERFFIS 60
Query: 431 HVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPK 610
HVLAFFAASDGIVNENLVERF+QEVQVTEARCFYGFQIAMEN+HSEMYSLLIDTYI++P
Sbjct: 61 HVLAFFAASDGIVNENLVERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPS 120
Query: 611 ERDFLFNAVETLPCVKKKADWALQWIASKTATFGER 718
ER++LFNA+ETLPCVKKKADWAL WI ++ A++GER
Sbjct: 121 EREYLFNAIETLPCVKKKADWALNWIGNQKASYGER 156
>UniRef50_P36603 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=12; Eukaryota|Rep: Ribonucleoside-diphosphate
reductase small chain - Schizosaccharomyces pombe
(Fission yeast)
Length = 391
Score = 240 bits (587), Expect = 3e-62
Identities = 115/199 (57%), Positives = 139/199 (69%), Gaps = 1/199 (0%)
Frame = +2
Query: 218 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 397
L K +E D E +LR NP RFV+FPI+Y +IWQ YKKAEASFWT EE+DLSKDL DW+
Sbjct: 57 LGKKEDELD---EVVLRPNPHRFVLFPIKYHEIWQFYKKAEASFWTAEEIDLSKDLVDWD 113
Query: 398 T-LKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMY 574
L ER+FI VLA+FAASDGIVNENL+ERFS EVQ+ EARC YGFQI +EN+HSE Y
Sbjct: 114 NKLNADERYFISTVLAYFAASDGIVNENLLERFSSEVQIPEARCVYGFQIMIENIHSETY 173
Query: 575 SLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXX 754
SLL+DTYIR+PKE+ F+A+ T+ +K KA WAL+WI + +T+ R
Sbjct: 174 SLLLDTYIREPKEKQRHFDAILTMGSIKAKAKWALRWINDEDSTYAIRLVAFAAVEGIFF 233
Query: 755 XXXXXXXXWLXKRGLMPGL 811
WL KRGLMPGL
Sbjct: 234 SGSFASIFWLKKRGLMPGL 252
>UniRef50_Q5K9L8 Cluster: Ribonucleotide reductase small subunit,
putative; n=1; Filobasidiella neoformans|Rep:
Ribonucleotide reductase small subunit, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 430
Score = 217 bits (530), Expect = 3e-55
Identities = 104/211 (49%), Positives = 137/211 (64%), Gaps = 1/211 (0%)
Frame = +2
Query: 182 ATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVE 361
+ K N +E + + F E ++E +LRE+ RFV+FPI+Y +IWQ YK A+ASFWT E
Sbjct: 78 SNKGGNPAKEGKVTRKFPE--EEEEDILRESESRFVLFPIKYNEIWQAYKHAQASFWTAE 135
Query: 362 EVDLSKDLSDW-ETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGF 538
E+D DL DW + + + ER FI +LAFFAASDGIV EN+V +F+ EVQ+ EAR FY F
Sbjct: 136 ELDFGHDLIDWHDRMTEQERFFILRILAFFAASDGIVGENIVSQFALEVQIAEARAFYSF 195
Query: 539 QIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGER 718
Q +E VHSE YSLLI+TY+RD +E+DFLF + +PC+K+KADWAL++I + F R
Sbjct: 196 QSMIEQVHSETYSLLIETYVRDAQEKDFLFRGMTNIPCIKQKADWALKYITDE-LPFRTR 254
Query: 719 XXXXXXXXXXXXXXXXXXXXWLXKRGLMPGL 811
WL KRGLMPGL
Sbjct: 255 LVAFACVEGIFFSGSFAAIFWLKKRGLMPGL 285
>UniRef50_Q16J81 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 244
Score = 190 bits (464), Expect = 3e-47
Identities = 85/105 (80%), Positives = 97/105 (92%)
Frame = +2
Query: 356 VEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYG 535
++EVDLSKDL+DWE LK E+HFI HVLAFF ASDG +NENLVERFSQE+QVTEARCFYG
Sbjct: 140 IKEVDLSKDLADWEKLKSGEKHFISHVLAFFVASDGSMNENLVERFSQELQVTEARCFYG 199
Query: 536 FQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKAD 670
FQIAMENVHSEMYSLLIDTYIRD K+R++LFNA++ LPCVKKKA+
Sbjct: 200 FQIAMENVHSEMYSLLIDTYIRDSKQREYLFNAIDNLPCVKKKAE 244
>UniRef50_Q5IJA4 Cluster: RR2 protein; n=4; Shrimp white spot
syndrome virus|Rep: RR2 protein - White spot syndrome
virus (WSSV)
Length = 328
Score = 182 bits (444), Expect = 7e-45
Identities = 83/192 (43%), Positives = 109/192 (56%)
Frame = +2
Query: 236 EFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSE 415
+ D K L RENP RFV PI + D+W+MYKK A FWT+EE+D +D DWE L E
Sbjct: 27 QVDTSKHLLTRENPNRFVSRPIVHEDLWEMYKKEVACFWTLEEIDFERDPKDWEKLTQDE 86
Query: 416 RHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTY 595
+ FI +LAFFA+SDGIV ENL R Q Q+ EAR F+ FQ+ ME++H +Y LID
Sbjct: 87 KDFILQILAFFASSDGIVIENLTTRLRQVAQIPEARSFFDFQVGMESIHGNVYGELIDRL 146
Query: 596 IRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXX 775
+ D K++ LFNA + P +KKK WA+ W+ S E
Sbjct: 147 VPDEKDKAILFNAAQHFPAIKKKEQWAINWMQSNN-DLAELIVAFAAVEGIFFSGAFASI 205
Query: 776 XWLXKRGLMPGL 811
W+ RG++PGL
Sbjct: 206 FWIKNRGILPGL 217
>UniRef50_Q7T6Y9 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=1; Acanthamoeba polyphaga mimivirus|Rep:
Ribonucleoside-diphosphate reductase small chain -
Mimivirus
Length = 417
Score = 182 bits (444), Expect = 7e-45
Identities = 93/247 (37%), Positives = 135/247 (54%), Gaps = 13/247 (5%)
Frame = +2
Query: 110 ENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDK----------NFEEFDPQKEP 259
EN+ I+ + +K + + + N E +D + +FE KEP
Sbjct: 41 ENISESISEPTTINSKKKTSELIFSEETLNNVEIIDTEPYLSDYHKHAIDFENDVIMKEP 100
Query: 260 LLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHV 436
+L ++ + PI+Y +W YK ++WTVEEVDL+KD++DW L D +R+FI HV
Sbjct: 101 ILSLKSEQYTVHPIKYQKVWDNYKDQMKNYWTVEEVDLAKDVNDWNNHLSDDDRNFIMHV 160
Query: 437 LAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKER 616
LAFFAA+DGIVN N+ E V++ EA C YGFQ AMEN H EMYSL++ T+++D R
Sbjct: 161 LAFFAAADGIVNANIKENLIDVVKIKEAECAYGFQYAMENAHGEMYSLMLTTFVKDDALR 220
Query: 617 DFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLXKRG 796
+ L N+++T+P +KKKADW +WI S T+ + WL R
Sbjct: 221 NKLINSIKTMPSIKKKADWCNKWIKS-DKTYAHKLVAFSIVEGVFFSGSFASIFWLKTRE 279
Query: 797 L--MPGL 811
+ MPGL
Sbjct: 280 MHVMPGL 286
>UniRef50_P49723 Cluster: Ribonucleoside-diphosphate reductase small
chain 2; n=3; Saccharomycetales|Rep:
Ribonucleoside-diphosphate reductase small chain 2 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 345
Score = 174 bits (423), Expect = 3e-42
Identities = 80/186 (43%), Positives = 117/186 (62%)
Frame = +2
Query: 254 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 433
E LL EN RRFV+FPI+Y +IW YKK EASFWT EE++L+KD D++ L D ++ +I +
Sbjct: 25 EILLMENSRRFVMFPIKYHEIWAAYKKVEASFWTAEEIELAKDTEDFQKLTDDQKTYIGN 84
Query: 434 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 613
+LA +SD +VN+ L+E FS ++Q E + FYGFQI MEN++SE+YS+++D + +DPK
Sbjct: 85 LLALSISSDNLVNKYLIENFSAQLQNPEGKSFYGFQIMMENIYSEVYSMMVDAFFKDPKN 144
Query: 614 RDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLXKR 793
LF + LP VK KA + +WI++ + + ER WL +
Sbjct: 145 IP-LFKEIANLPEVKHKAAFIERWISNDDSLYAERLVAFAAKEGIFQAGNYASMFWLTDK 203
Query: 794 GLMPGL 811
+MPGL
Sbjct: 204 KIMPGL 209
>UniRef50_A1A6K4 Cluster: At5g40942; n=1; Arabidopsis thaliana|Rep:
At5g40942 - Arabidopsis thaliana (Mouse-ear cress)
Length = 231
Score = 170 bits (414), Expect = 3e-41
Identities = 82/131 (62%), Positives = 101/131 (77%), Gaps = 1/131 (0%)
Frame = +2
Query: 251 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFI 427
+EP+L P RF +FPIQYP IW+MYKKAEASFWT EEVDLS+D DWE +L + ERHFI
Sbjct: 6 EEPILTPTPDRFCMFPIQYPQIWEMYKKAEASFWTAEEVDLSQDNRDWENSLTNDERHFI 65
Query: 428 KHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDP 607
KHVLAFFAASDGIV ENL RF +VQ++EAR FYGFQIA+EN+HSE +L+ T +
Sbjct: 66 KHVLAFFAASDGIVLENLSTRFMSDVQISEARAFYGFQIAIENIHSE---ILLRTKFDED 122
Query: 608 KERDFLFNAVE 640
+ + + +AVE
Sbjct: 123 RLKAIVCDAVE 133
>UniRef50_P42492 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=2; African swine fever virus|Rep:
Ribonucleoside-diphosphate reductase small chain -
African swine fever virus (strain BA71V) (ASFV)
Length = 334
Score = 168 bits (409), Expect = 1e-40
Identities = 80/191 (41%), Positives = 107/191 (56%)
Frame = +2
Query: 239 FDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSER 418
F E LL EN +RF IFPIQ+P+ W YKK E+ WT +EVD+ KD+ DWE + +R
Sbjct: 4 FISNMEELLIENSQRFTIFPIQHPECWNWYKKLESLTWTAQEVDMCKDIDDWEAMPKPQR 63
Query: 419 HFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 598
F K +LAFF +D IV ENL+ F +E++V E FY Q A E VHSE YS+ + T I
Sbjct: 64 EFYKQILAFFVVADEIVIENLLTNFMREIKVKEVLYFYTMQAAQECVHSEAYSIQVKTLI 123
Query: 599 RDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXX 778
D KE+ +F+ +E P +KK A W QW+ T GER
Sbjct: 124 PDEKEQQRIFSGIEKHPIIKKMAQWVRQWMDPDRNTLGERLVGFAAVEGILFQNHFVAIQ 183
Query: 779 WLXKRGLMPGL 811
+L ++ +MPGL
Sbjct: 184 FLKEQNIMPGL 194
>UniRef50_Q54E77 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 257
Score = 163 bits (396), Expect = 5e-39
Identities = 83/168 (49%), Positives = 107/168 (63%), Gaps = 1/168 (0%)
Frame = +2
Query: 311 DIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVLAFFAASDGIVNENLVE 487
DIW+MYKK A+ W VEE++ S D DWE L + ER F +VLAFF AS GI+N+NL
Sbjct: 86 DIWKMYKKTLANQWVVEEIESSDDGLDWEKKLTNDERDFFSNVLAFFVASCGIINKNL-N 144
Query: 488 RFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKA 667
RF +VQ+ EA+CFY +QI ++ +HSE YSLLI+T I+D +D LFNA+ET+PCVKKKA
Sbjct: 145 RFMSKVQIPEAKCFYNYQIHIKYLHSETYSLLIETCIKDKNIKDKLFNAIETIPCVKKKA 204
Query: 668 DWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLXKRGLMPGL 811
+WAL+WI +F +R L KR LM GL
Sbjct: 205 EWALKWI---NESFEKRLVALVAFESIFFSGSFRIISLLKKRSLMQGL 249
>UniRef50_A7TFJ9 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 351
Score = 160 bits (388), Expect = 4e-38
Identities = 76/188 (40%), Positives = 114/188 (60%), Gaps = 3/188 (1%)
Frame = +2
Query: 254 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDW---ETLKDSERHF 424
E +L EN RRFV+FPI+Y +I+ YKK EA FWT EE+D SKD+ +W + KD + +F
Sbjct: 26 ESILTENKRRFVLFPIKYHEIYDAYKKREALFWTAEELDFSKDIQNWNDDKITKDEKEYF 85
Query: 425 IKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRD 604
I+ +LA FA++D + ENL E S E Q EA+CFYGFQI ++N+H E+Y +LID+ ++D
Sbjct: 86 IR-LLALFASND-MDRENLTEHLSAECQTPEAKCFYGFQIMVDNIHQEVYGILIDSLVKD 143
Query: 605 PKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWL 784
++R +F ++ L +K+K ++A W ++ FGE+
Sbjct: 144 DEKRTSMFEEIKDLTNIKEKIEYAKSWFENEDNLFGEKLIAEAAVLGIFSLSAYVSVLSF 203
Query: 785 XKRGLMPG 808
K GL+PG
Sbjct: 204 QKGGLIPG 211
>UniRef50_Q8QNF1 Cluster: EsV-1-128; n=2; Phaeovirus|Rep: EsV-1-128
- Ectocarpus siliculosus virus 1
Length = 419
Score = 149 bits (362), Expect = 6e-35
Identities = 74/181 (40%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Frame = +2
Query: 281 RFVIF----PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFF 448
RF++F +Y D++Q+YKK A FW VEE+DLS D DWE E+HF+K VLAFF
Sbjct: 105 RFILFNGKTEHEYADVFQLYKKQTALFWVVEEIDLSGDSKDWEDASSDEKHFLKLVLAFF 164
Query: 449 AASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLF 628
A+ D IV EN+ F E+ + + R + Q A E VH E YSLLI TY RD +E+ +
Sbjct: 165 ASLDQIVMENIGLNFKNEIVIPQIRQHFAIQEATEAVHGESYSLLIQTYFRDTEEQRHVM 224
Query: 629 NAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLXKRGLMPG 808
+++T+P ++KKA WA +W+ +TA+ ER WL KR G
Sbjct: 225 RSIQTMPIIEKKALWAEKWMNPETASLAERLVGFTCLEGVQFSGSFCAIYWLKKRQKFKG 284
Query: 809 L 811
L
Sbjct: 285 L 285
>UniRef50_A0EZ20 Cluster: Ribonucleotide reductase small subunit;
n=1; Ecotropis obliqua NPV|Rep: Ribonucleotide reductase
small subunit - Ecotropis obliqua NPV
Length = 341
Score = 149 bits (360), Expect = 1e-34
Identities = 73/140 (52%), Positives = 94/140 (67%), Gaps = 1/140 (0%)
Frame = +2
Query: 281 RFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFIKHVLAFFAAS 457
R VI PI+ ++W+M K A W VEE DLS+D DW L ER F+KH+LAFFA++
Sbjct: 8 RKVILPIENQNLWRMDKTAMDCMWKVEEDDLSRDFDDWRHKLCVQERFFLKHILAFFASA 67
Query: 458 DGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAV 637
D IVN NL++ V EAR FY QI +ENVHSEMYSLL+ YI++ +ER+ L NA
Sbjct: 68 DTIVNINLIDYVRAAVPELEARYFYDQQILIENVHSEMYSLLVFEYIKNSEERNKLLNAF 127
Query: 638 ETLPCVKKKADWALQWIASK 697
+ + C+KKKA WAL+W SK
Sbjct: 128 DRIDCIKKKAQWALKWTESK 147
>UniRef50_Q4TH71 Cluster: Chromosome undetermined SCAF3173, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF3173,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 441
Score = 142 bits (344), Expect = 9e-33
Identities = 61/75 (81%), Positives = 71/75 (94%)
Frame = +2
Query: 482 VERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKK 661
VERF+QEVQVTEARCFYGFQIAMEN+HSEMYSLLIDTYI++P ER++LFNA+ETLPCVKK
Sbjct: 234 VERFTQEVQVTEARCFYGFQIAMENIHSEMYSLLIDTYIKEPSEREYLFNAIETLPCVKK 293
Query: 662 KADWALQWIASKTAT 706
KADWAL WI ++ A+
Sbjct: 294 KADWALNWIGNQKAS 308
Score = 43.2 bits (97), Expect = 0.008
Identities = 21/40 (52%), Positives = 26/40 (65%)
Frame = +1
Query: 253 GTSAA*EPAALCHLPYSIPRYMANVQES*SFVLDRRGSRF 372
G A EPAAL HLP+ +P +A+VQE LDRRG R+
Sbjct: 107 GAPAEGEPAALRHLPHPVPGPLADVQEGGGVFLDRRGGRW 146
>UniRef50_A7TLQ4 Cluster: Putative uncharacterized protein; n=1;
Vanderwaltozyma polyspora DSM 70294|Rep: Putative
uncharacterized protein - Vanderwaltozyma polyspora DSM
70294
Length = 361
Score = 138 bits (335), Expect = 1e-31
Identities = 70/207 (33%), Positives = 111/207 (53%), Gaps = 1/207 (0%)
Frame = +2
Query: 194 DNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDL 373
D+ E+ + + E KEP+L EN RFV+ PI++ ++ YKK EA FW EE+D
Sbjct: 20 DSFLEKYKIHRLEVEESQSKEPILMENKSRFVLMPIKFHTVYDGYKKREALFWPAEEIDF 79
Query: 374 SKDLSDW-ETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAM 550
S D+ +W + D ++ IK LAF +S + + L E S EVQ+ EA+CFYGF+I +
Sbjct: 80 SHDIINWGKKASDHDKSIIKKSLAFLCSSV-LGSFYLPEHISSEVQIPEAKCFYGFEIMV 138
Query: 551 ENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXX 730
EN+H E+YSL ID + + E +F V+ +++K +A +W +++ F E+
Sbjct: 139 ENIHGEVYSLAIDQLVHNTDEIKKMFKDVDNAKFIERKKSFAERWFDKESSLFAEKLVAF 198
Query: 731 XXXXXXXXXXXXXXXXWLXKRGLMPGL 811
L K+ ++PGL
Sbjct: 199 SSIEAIFSLVSFFSIMSLEKKDIIPGL 225
>UniRef50_Q9K3C2 Cluster: Ribonucleotide-diphosphate reductase small
chain; n=14; Bacteria|Rep: Ribonucleotide-diphosphate
reductase small chain - Streptomyces coelicolor
Length = 343
Score = 116 bits (278), Expect = 9e-25
Identities = 53/133 (39%), Positives = 81/133 (60%)
Frame = +2
Query: 296 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNE 475
P++YPD ++ Y+ A + W VEEVDL D++D L E+H I ++AFFA D IV
Sbjct: 25 PMRYPDFYERYRDAIKNTWHVEEVDLHSDVADLAKLSPMEQHLIGRLVAFFATGDSIVAN 84
Query: 476 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCV 655
NLV + + EAR + Q+ E VH + Y L+DTY+ DP++R F AVE +P +
Sbjct: 85 NLVLTLYKHINSPEARLYLSRQLFEEAVHVQFYLTLLDTYLPDPEDRAAAFAAVENIPSI 144
Query: 656 KKKADWALQWIAS 694
++KA++ +W+ S
Sbjct: 145 REKAEFCFRWMDS 157
>UniRef50_Q6BBQ6 Cluster: Ribonucleotide reductase small subunit;
n=9; Plasmodium|Rep: Ribonucleotide reductase small
subunit - Plasmodium falciparum
Length = 324
Score = 99.1 bits (236), Expect = 1e-19
Identities = 47/140 (33%), Positives = 78/140 (55%)
Frame = +2
Query: 254 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 433
+ +L+EN R+V+FPI+Y W YK+ E+ FWT E+ + KD E + + +K
Sbjct: 19 DEILKENKFRWVMFPIKYKTFWSYYKEIESLFWTAEDYNFDKDKQYLENI--DKNMLVKD 76
Query: 434 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 613
+ + ++ +++ +Q+ E R FYGFQ+ MEN+H E+Y+ + +TYI D K+
Sbjct: 77 LHVY--EEQALITSKMLDI----IQIPEGRAFYGFQMCMENIHDEVYACIFETYIPDSKQ 130
Query: 614 RDFLFNAVETLPCVKKKADW 673
+ + N V L V KK W
Sbjct: 131 KRVIINKVIELDSVLKKQKW 150
>UniRef50_UPI00015BCE4B Cluster: UPI00015BCE4B related cluster; n=1;
unknown|Rep: UPI00015BCE4B UniRef100 entry - unknown
Length = 319
Score = 85.4 bits (202), Expect = 2e-15
Identities = 42/129 (32%), Positives = 78/129 (60%), Gaps = 1/129 (0%)
Frame = +2
Query: 299 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSD-WETLKDSERHFIKHVLAFFAASDGIVNE 475
+ YP+I +Y KA+ ++W EE DL+ D + +E L D ERH++ H + FF++++G V +
Sbjct: 28 VVYPEILNLYTKAKNNYWIPEEYDLANDKHEFYEKLNDIERHYMLHTVGFFSSAEGWVGQ 87
Query: 476 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCV 655
N++E S+ ++ TE R F G+Q+ E H + + ++D P E ++ E + +
Sbjct: 88 NILE-ISKRIRNTETRMFLGYQLMEEMKHIDTFRYIMDGLDLKPHE---VYAMHENVKEI 143
Query: 656 KKKADWALQ 682
K+KAD+ ++
Sbjct: 144 KRKADFEVK 152
>UniRef50_Q42088 Cluster: Ribonucleotide reductase small subunit;
n=1; Arabidopsis thaliana|Rep: Ribonucleotide reductase
small subunit - Arabidopsis thaliana (Mouse-ear cress)
Length = 83
Score = 84.6 bits (200), Expect = 3e-15
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = +2
Query: 251 KEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSE 415
+EPLL +RF +FPI+Y IW+MYKKAEASFWT EEVDLS D+ WE L DSE
Sbjct: 7 EEPLLMAQNQRFTMFPIRYKSIWEMYKKAEASFWTAEEVDLSTDVQQWEALTDSE 61
>UniRef50_Q6R7K3 Cluster: ORF20; n=1; Ostreid herpesvirus 1|Rep:
ORF20 - Ostreid herpesvirus 1
Length = 579
Score = 83.4 bits (197), Expect = 6e-15
Identities = 55/193 (28%), Positives = 91/193 (47%), Gaps = 2/193 (1%)
Frame = +2
Query: 143 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 322
R T +P + +L T D LTE D D K+ + + + ++ P Y +
Sbjct: 27 RKATLTPEQFEILNTSYDELTEFDDHPLYGGATDHHKDIVGKYD--HALLKPAVYQQLRD 84
Query: 323 MYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQE 502
K E+S W E+D D+ WE + ++ER ++ VLAFFA D +V + + F+ E
Sbjct: 85 FATKMESSSWQQTEIDAESDIPTWEQISENERDCVRKVLAFFAVGDTLVKDR-IAIFADE 143
Query: 503 VQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVE--TLPCVKKKADWA 676
+ E + F +Q E VH +Y+ +D ++D L NA + +KKK DW
Sbjct: 144 FPLPECKDFIDWQTVNEGVHQRVYNNYLDALVKDKIYLADLVNAYKDPEFAPIKKKVDWL 203
Query: 677 LQWIASKTATFGE 715
+ I+ + + GE
Sbjct: 204 GKIISVENDSRGE 216
>UniRef50_A7AR36 Cluster: Ribonucleoside-diphosphate reductase beta
subunit, putative; n=1; Babesia bovis|Rep:
Ribonucleoside-diphosphate reductase beta subunit,
putative - Babesia bovis
Length = 329
Score = 83.0 bits (196), Expect = 8e-15
Identities = 37/117 (31%), Positives = 64/117 (54%), Gaps = 3/117 (2%)
Frame = +2
Query: 242 DPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERH 421
+ E LL+EN R+V+FPI Y +W MYK+ E SFW E+ + + + +L R
Sbjct: 17 EQHNETLLKENANRWVMFPIHYDALWAMYKEIENSFWAAEDFRFANERDTYSSLPTELRQ 76
Query: 422 FIKHVLAF---FAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLL 583
+ ++++ S+ + + Q+ EAR FYGFQ++ EN+HSE++ ++
Sbjct: 77 LVVKLISYHNRLDRSEVARPATITLDLLADTQIPEARAFYGFQVSYENIHSELFGIM 133
>UniRef50_Q0DD39 Cluster: Os06g0257500 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os06g0257500 protein -
Oryza sativa subsp. japonica (Rice)
Length = 352
Score = 79.8 bits (188), Expect = 8e-14
Identities = 54/188 (28%), Positives = 102/188 (54%), Gaps = 1/188 (0%)
Frame = -3
Query: 811 KSRHKAPLXEPEDGSKTA*EKDSXYXCKGNNPFTKCCSLACNPL*SPICFLLYTGKSLNR 632
++RH+ PL EPEDG++ A E+D +G+ + + A +P P+ + ++
Sbjct: 119 EARHEPPLLEPEDGAEGAREEDPLDAGEGDEALGEALA-AVDPAHGPVGLAAHGRDGVDG 177
Query: 631 IKQKISLLRISDVCIYKQGIHFRMNIFHGYLEAIETSCLSDLNFL*KSLNQVFIYNAI*S 452
+Q + L ++DV + +Q +H R+++ G LE++E + L DL+ + +V ++A+
Sbjct: 178 AEQPVLLGAVADVGLEQQRVHLRVDVLDGDLESVEGARLGDLHVGHEPGGEVLEHDAVGG 237
Query: 451 RKESKDMLDEMSLT-IF*SLPV**ILGQIDFLDGPKRSFSFLVHLPYIGVLNREDDKAPR 275
+E + + DE++L +PV + G++ L P+R LV LP + V +RE ++
Sbjct: 238 GEEGEHVGDEVALVGGQRGVPVARVGGEVHLLRRPERRHRLLVELPDLRVPDREHRESLG 297
Query: 274 VLTQQRFL 251
L QQR L
Sbjct: 298 RLRQQRLL 305
>UniRef50_Q5CFS5 Cluster: Ribonucleotide reductase small subunit;
n=2; Cryptosporidium|Rep: Ribonucleotide reductase small
subunit - Cryptosporidium hominis
Length = 369
Score = 76.6 bits (180), Expect = 7e-13
Identities = 45/139 (32%), Positives = 75/139 (53%), Gaps = 3/139 (2%)
Frame = +2
Query: 233 EEFDPQK-EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKD 409
E + QK E +L +NP R+V+FPI+Y +W +YKK E SFWT E + +D + + +
Sbjct: 7 ELLEQQKNESILLDNPFRWVLFPIKYSRLWSLYKKYEVSFWTAEVISPMEDKTKLMNMDE 66
Query: 410 SERHFIKHVLAFFAASDGIVNEN--LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLL 583
+I+ V A D + L +VQV EAR ++ F + MEN++ E++
Sbjct: 67 RLLDYIEMVFAKRIYIDNTCLDTVLLTCELLGQVQVPEARGYFSFTMCMENIYKELFMNY 126
Query: 584 IDTYIRDPKERDFLFNAVE 640
++ +R KE++ + VE
Sbjct: 127 VE-MLRKNKEKNEKTDEVE 144
>UniRef50_A7C3B1 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=1; Beggiatoa sp. PS|Rep:
Ribonucleotide-diphosphate reductase beta subunit -
Beggiatoa sp. PS
Length = 374
Score = 74.9 bits (176), Expect = 2e-12
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 2/130 (1%)
Frame = +2
Query: 296 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET--LKDSERHFIKHVLAFFAASDGIV 469
P++Y + + + A +FW E+ + +D W T L ++E K +++ ASD +V
Sbjct: 57 PVKYTSVRERFLNARKNFWIPNEIPMGEDKLQWNTGLLTEAEMWLFKSNISYLTASDNLV 116
Query: 470 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLP 649
+NL + + E R ++ QI E+ H E Y +++++ D K + +FN + +P
Sbjct: 117 PDNLDNAILKHITANEMRQYFRHQIMEESNHIESYLFILESFGLDEKGQGQIFNLYQEVP 176
Query: 650 CVKKKADWAL 679
+ +K +W L
Sbjct: 177 ALTEKLNWNL 186
>UniRef50_Q4UJ43 Cluster: Ribonucleoside reductase, putative; n=2;
Theileria|Rep: Ribonucleoside reductase, putative -
Theileria annulata
Length = 332
Score = 72.9 bits (171), Expect = 9e-12
Identities = 38/117 (32%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Frame = +2
Query: 254 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 433
E LL+EN R+V+FPI++ W +YK+ E +FW E+ + D+ L + + +
Sbjct: 18 EILLKENHNRWVMFPIEHDTFWILYKEVENNFWAAEDFIFTDDIKLLYQLPKPIFNTLLN 77
Query: 434 VLAFFAASDGIV---NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTY 595
+L+F D + ++ EVQ+ EAR FYGFQ+ EN+H+E S + +
Sbjct: 78 LLSFHINLDNKLICRPVDITLDLLSEVQIAEARAFYGFQLTDENIHTETISSMFQLF 134
>UniRef50_A7K7Z4 Cluster: Putative uncharacterized protein z034R;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
z034R - Chlorella virus ATCV-1
Length = 410
Score = 71.3 bits (167), Expect = 3e-11
Identities = 49/171 (28%), Positives = 93/171 (54%), Gaps = 1/171 (0%)
Frame = -3
Query: 802 HKAPLXEPEDGSKTA*EKDSXYXCKGNNPFTKCCSLACNPL*SPICFLLYTGKSLNRIKQ 623
H+ P+ +PE+G++ E+ + + G+ + ++A P C L + L+ +++
Sbjct: 140 HEPPVAQPENGAERPGEQKTLHAHPGDEALCEG-AVARKVFRGPRCLLSHGRDRLDSLEE 198
Query: 622 KISLLRISDVCIYKQGIHFRMNIFHGYLEAIETSCLSDLNFL*KSLNQVFIYNAI*SRKE 443
++L + + I +QG+ ++ L ++E +C +FL K + QV ++AI + KE
Sbjct: 199 LVTLGLVLNKSIKEQGVLLAVDALIVPLVSVEHTCRGVRDFLGKVVVQVLHHHAIAACKE 258
Query: 442 SKDMLDEMSLTIF*SL-PV**ILGQIDFLDGPKRSFSFLVHLPYIGVLNRE 293
++D+LDE++L I PV IL ++D L GP+ LVHL +GV + E
Sbjct: 259 AEDVLDEVALIIVQFFTPVYHILVELDLLHGPESGNGLLVHLENVGVPDGE 309
>UniRef50_P20561 Cluster: Uncharacterized 11.6 kDa protein; n=4;
Orthopoxvirus|Rep: Uncharacterized 11.6 kDa protein -
Vaccinia virus (strain Copenhagen) (VACV)
Length = 96
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/85 (40%), Positives = 54/85 (63%)
Frame = -3
Query: 685 PL*SPICFLLYTGKSLNRIKQKISLLRISDVCIYKQGIHFRMNIFHGYLEAIETSCLSDL 506
PL SPI L YT IK+ + + I ++ I ++ IHFRMN+F+G+L+++ETS L +L
Sbjct: 3 PLLSPIGLLFYTRHCFYGIKEIVFFITIFNISIDQKTIHFRMNVFNGHLKSVETSSLGNL 62
Query: 505 NFL*KSLNQVFIYNAI*SRKESKDM 431
F KS Q+FI+ ++ K+ + M
Sbjct: 63 YFCTKSFRQIFIHYSVTGCKKRQYM 87
>UniRef50_A7CVZ4 Cluster: Ribonucleoside-diphosphate reductase; n=1;
Opitutaceae bacterium TAV2|Rep:
Ribonucleoside-diphosphate reductase - Opitutaceae
bacterium TAV2
Length = 362
Score = 66.9 bits (156), Expect = 6e-10
Identities = 33/136 (24%), Positives = 71/136 (52%), Gaps = 3/136 (2%)
Frame = +2
Query: 284 FVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE---TLKDSERHFIKHVLAFFAA 454
F + P++Y + +Y+ +A+ W E++ + KD+ W + D ER I+ + +F+A
Sbjct: 37 FNLLPLKYQWAYDLYRTMKANHWEPEDIPMGKDIEQWRDPRAVTDQERWIIRMGIGYFSA 96
Query: 455 SDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNA 634
++GIV +N+ + V E + G EN+H++ +I + +P E + +F
Sbjct: 97 AEGIVGDNIQHVTRELVTAPELKLVLGRHAHEENIHADSLLYMISSLGINPHECEAMF-- 154
Query: 635 VETLPCVKKKADWALQ 682
E +P + +K ++ ++
Sbjct: 155 -EDIPTIVRKNEFVVK 169
>UniRef50_Q5FPG6 Cluster: Ribonucleoside-diphosphate reductase beta
chain; n=22; Alphaproteobacteria|Rep:
Ribonucleoside-diphosphate reductase beta chain -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 339
Score = 65.3 bits (152), Expect = 2e-09
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Frame = +2
Query: 260 LLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFIKHV 436
L+ NP V P +YP + + + W EEV L+ D+ DW TL ++ERH + +
Sbjct: 18 LMTANP---VYKPFRYPWAYDAWLTQQRVHWLPEEVPLADDVKDWHRTLTEAERHLVTQI 74
Query: 437 LAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 592
FF SD VN ++ +SQ + TE +E +H YS L+DT
Sbjct: 75 FRFFTQSDVEVNSAYMKYYSQVFKPTEVLMMLSAFSNIETIHIAAYSHLLDT 126
>UniRef50_A4IY38 Cluster: Biofunctional glutaredoxin 3
protein/Ribonucleoside-diphosphate reductase beta
subunit; n=11; Francisella tularensis|Rep: Biofunctional
glutaredoxin 3 protein/Ribonucleoside-diphosphate
reductase beta subunit - Francisella tularensis subsp.
tularensis (strain WY96-3418)
Length = 410
Score = 64.9 bits (151), Expect = 2e-09
Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 2/101 (1%)
Frame = +2
Query: 296 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDS--ERHFIKHVLAFFAASDGIV 469
P YP + K E + W +E+DLS+D++DW+ K + E+ +I ++L F SD V
Sbjct: 102 PFNYPWAVDLTVKHEKAHWIEDEIDLSEDVTDWKNGKITKVEKEYITNILRLFTQSDVAV 161
Query: 470 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 592
+N ++F + E R G A E +H Y+LL DT
Sbjct: 162 GQNYYDQFIPLFKNNEIRNMLGSFAAREGIHQRAYALLNDT 202
>UniRef50_Q8VB15 Cluster: Wsv190; n=1; Shrimp white spot syndrome
virus|Rep: Wsv190 - White spot syndrome virus (WSSV)
Length = 85
Score = 63.7 bits (148), Expect = 5e-09
Identities = 38/78 (48%), Positives = 46/78 (58%)
Frame = -1
Query: 813 VSPGIRPRFXSQKMEAKLPEKKIPXTXAKATILSPNVAVLLAIHCRAQSAFFFTQGRVST 634
V PG P F QKM+A P KKIP T AKATI S ++LL I A +FF G+
Sbjct: 7 VRPGKIPLFLIQKMDANAPLKKIPSTAAKATISSAK-SLLLCIQLIAHCSFFLMAGKCCA 65
Query: 633 ALNRKSLSFGSLMYVSIS 580
ALN+ +LSF S +SIS
Sbjct: 66 ALNKIALSFSSGTSLSIS 83
>UniRef50_A7IV34 Cluster: Putative uncharacterized protein m654R;
n=3; Chlorovirus|Rep: Putative uncharacterized protein
m654R - Chlorella virus MT325
Length = 188
Score = 62.9 bits (146), Expect = 9e-09
Identities = 42/90 (46%), Positives = 46/90 (51%)
Frame = -1
Query: 807 PGIRPRFXSQKMEAKLPEKKIPXTXAKATILSPNVAVLLAIHCRAQSAFFFTQGRVSTAL 628
PGI PRF SQK+ K PE P T AT S N C A +AFF T G VS A
Sbjct: 100 PGITPRFLSQKIAQKEPENSRPSTHTHATRRSANDLSCDRNFC-AHAAFFPTAGIVSIAS 158
Query: 627 NRKSLSFGSLMYVSISREYISE*TFSMAIW 538
R+ S S M S REYISE S+ IW
Sbjct: 159 KREFRSASSSMSASSRREYISEWMDSLNIW 188
>UniRef50_O83092 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=13; Bacteria|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Treponema pallidum
Length = 351
Score = 62.9 bits (146), Expect = 9e-09
Identities = 36/111 (32%), Positives = 57/111 (51%), Gaps = 1/111 (0%)
Frame = +2
Query: 299 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 478
++YP + + Y++A +FW EE+++S D+ D+ L E+ +L+F D I N
Sbjct: 41 MKYPWVSKWYRQAMNNFWIPEEINMSSDVQDYRNLSAIEKTAYDKILSFLIFLDSIQTAN 100
Query: 479 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKER-DFLF 628
L Q + E Q E VHS+ YS ++DT I P+ER D L+
Sbjct: 101 L-PNIGQYITANEINLCLTIQAFQEAVHSQSYSYMLDT-ICSPEERNDILY 149
>UniRef50_Q9HMU4 Cluster: Ribonucleoside reductase small chain; n=1;
Halobacterium salinarum|Rep: Ribonucleoside reductase
small chain - Halobacterium salinarium (Halobacterium
halobium)
Length = 331
Score = 62.1 bits (144), Expect = 2e-08
Identities = 35/132 (26%), Positives = 66/132 (50%), Gaps = 2/132 (1%)
Frame = +2
Query: 290 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE--TLKDSERHFIKHVLAFFAASDG 463
I PI Y + Y++ A+ WT EEV + D+S W+ L D+ER ++ L FF+ ++
Sbjct: 15 ILPIDYDWAREYYQQGVANNWTPEEVAMQGDISQWQGNELTDAERQLVEWNLGFFSTAES 74
Query: 464 IVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVET 643
+ N+V + V E R + Q E VH++ + D+ DP + ++ +
Sbjct: 75 LTANNIVLAIYEYVTAPECRQYLLRQAYEEAVHTDTFIYCCDSLGFDP---EHMYGMYDR 131
Query: 644 LPCVKKKADWAL 679
+P + +K ++ +
Sbjct: 132 IPSIAEKDEFVV 143
>UniRef50_Q2S729 Cluster: Ribonucleotide reductase, beta subunit;
n=6; Proteobacteria|Rep: Ribonucleotide reductase, beta
subunit - Hahella chejuensis (strain KCTC 2396)
Length = 405
Score = 60.9 bits (141), Expect = 4e-08
Identities = 44/201 (21%), Positives = 90/201 (44%), Gaps = 9/201 (4%)
Frame = +2
Query: 89 MAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLR 268
+A + + S ++ ++ V T SP D+ + + + E PQK +
Sbjct: 19 LAVAIPAVSTSSAVSPQSPVST-SPAAAPAAGGAPDSAAKPAPVAEPVPEEVPQKLDPVN 77
Query: 269 ENPRRFV--------IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERH 421
+ +R V + P +YP W+ + A + WT ++++S+D+ D+ L E+H
Sbjct: 78 PDDKRVVNGMTDINQLAPFKYPWAWEFFLNANKNHWTPLDINMSQDVYDYHHKLTLEEKH 137
Query: 422 FIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIR 601
++VLA+ SD + N+ +++ E + + Q+ E++H+ Y I+T
Sbjct: 138 VYENVLAYLTTSDILAMRNIGLAVMEKMSAPELQIYQARQVYEESLHTWTYQHCIETIGL 197
Query: 602 DPKERDFLFNAVETLPCVKKK 664
D E ++N P + +K
Sbjct: 198 DQSE---IYNRYRVTPAIYRK 215
>UniRef50_Q89YE6 Cluster: Ribonucleoside-diphosphate reductase beta
subunit; n=29; Alphaproteobacteria|Rep:
Ribonucleoside-diphosphate reductase beta subunit -
Bradyrhizobium japonicum
Length = 360
Score = 59.7 bits (138), Expect = 9e-08
Identities = 38/126 (30%), Positives = 61/126 (48%), Gaps = 2/126 (1%)
Frame = +2
Query: 302 QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET--LKDSERHFIKHVLAFFAASDGIVNE 475
+Y ++ +K+ + + W EEV L DL+DW + + DSER + + FF SD V +
Sbjct: 36 RYAWAYEFWKRQQQTHWMGEEVPLGADLNDWASGRVTDSERALLTQIFRFFTQSDIEVGD 95
Query: 476 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCV 655
N +R+ Q + ME VH + Y+LL+ T + PK F A +
Sbjct: 96 NYFKRYIPIFQPLTVQMMMAAFTNMETVHIDAYALLLKT-LGMPKTE---FEAFRGYAQM 151
Query: 656 KKKADW 673
+ KAD+
Sbjct: 152 RAKADY 157
>UniRef50_A0Q1D6 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit; n=6; Clostridium|Rep:
Ribonucleoside-diphosphate reductase, beta subunit -
Clostridium novyi (strain NT)
Length = 342
Score = 59.7 bits (138), Expect = 9e-08
Identities = 30/111 (27%), Positives = 58/111 (52%)
Frame = +2
Query: 299 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 478
I+Y ++Y+ +FW EE+ L++D+ + L D ER+ +++F D + +EN
Sbjct: 32 IKYNWANELYRTMLNNFWIPEEISLNEDVKQFPYLTDGERNAFDKIISFLNFLDSVQSEN 91
Query: 479 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFN 631
L S+ + E Q E +H++ YS ++DT + +P RD +++
Sbjct: 92 L-PNISRYITAPEVSSLLNVQTFQEEIHAQSYSYILDT-VTNPITRDKIYD 140
>UniRef50_Q91FE8 Cluster: 376L; n=1; Invertebrate iridescent virus
6|Rep: 376L - Chilo iridescent virus (CIV) (Insect
iridescent virus type 6)
Length = 360
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +2
Query: 296 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVLAFFAASDGIVN 472
P YP+ + + K E S W EV + D++DW+ L D++R F+ ++ FF D V
Sbjct: 12 PFTYPEFYNKWDKHEKSHWLPSEVPMHDDVNDWKNRLNDNQRDFLTNIFRFFTQGDVDVA 71
Query: 473 ENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 592
++ ++ E G E VH + YS L++T
Sbjct: 72 SAYYTQYLPFFKLPEVTMMMGGFAGREGVHIDAYSYLLET 111
>UniRef50_Q9RZL6 Cluster: Ribonucleoside-diphosphate reductase, beta
chain; n=2; Deinococcus|Rep: Ribonucleoside-diphosphate
reductase, beta chain - Deinococcus radiodurans
Length = 354
Score = 58.4 bits (135), Expect = 2e-07
Identities = 36/113 (31%), Positives = 54/113 (47%)
Frame = +2
Query: 326 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 505
Y K + W EE+ L+ D W+TL D ER H A A D + E + R V
Sbjct: 44 YAKYTSQLWFPEEIPLTNDALAWKTLSDEERWTYIHASAGLNALDTLQGEVGMPRLRDLV 103
Query: 506 QVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKK 664
+ FQ ME++H+ YSL+ T++ +ER+ +F V T P ++ K
Sbjct: 104 DGHIRKATLQFQGMMEDIHARSYSLMNKTFLTASEERE-VFEWVRTQPQLQHK 155
>UniRef50_Q6A5Y4 Cluster: Ribonucleoside-diphosphate reductase beta
chain; n=6; Actinobacteria (class)|Rep:
Ribonucleoside-diphosphate reductase beta chain -
Propionibacterium acnes
Length = 328
Score = 58.4 bits (135), Expect = 2e-07
Identities = 31/135 (22%), Positives = 66/135 (48%)
Frame = +2
Query: 296 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNE 475
P+ Y + +Y +A A+ W E+ L +DL+D+ + E H + H++++F ++ +VN+
Sbjct: 15 PVTYSWAYDLYNQAVANTWFPNEIQLDEDLADFARMTPDEHHALTHLMSYFNPNELLVNK 74
Query: 476 NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCV 655
L V E + Q+ E H + +++T+ P +RD + + +P +
Sbjct: 75 ALAFGVYPYVNAAECHLYLAKQMWEEANHCMAFEYVLETF---PIDRDEAYRSHIHVPSM 131
Query: 656 KKKADWALQWIASKT 700
+K + + +I T
Sbjct: 132 ARKEAFEVAFIKRMT 146
>UniRef50_Q9Z6S4 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=117; Bacteria|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Chlamydia pneumoniae (Chlamydophila pneumoniae)
Length = 346
Score = 56.8 bits (131), Expect = 6e-07
Identities = 35/132 (26%), Positives = 64/132 (48%), Gaps = 2/132 (1%)
Frame = +2
Query: 290 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET--LKDSERHFIKHVLAFFAASDG 463
+ PI+Y W+ Y A+ W EV +++D+ W++ L + ER I L FF+ ++
Sbjct: 31 LVPIKYKWAWEHYLNGCANNWLPTEVPMARDIELWKSDELSEDERRVILLNLGFFSTAES 90
Query: 464 IVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVET 643
+V N+V + + EAR + Q E VH+ + + ++ D E +FNA
Sbjct: 91 LVGNNIVLAIFKHITNPEARQYLLRQAFEEAVHTHTFLYICESLGLDEGE---VFNAYNE 147
Query: 644 LPCVKKKADWAL 679
++ K D+ +
Sbjct: 148 RASIRAKDDFQM 159
>UniRef50_P20560 Cluster: Uncharacterized 8.3 kDa protein; n=3;
Orthopoxvirus|Rep: Uncharacterized 8.3 kDa protein -
Vaccinia virus (strain Copenhagen) (VACV)
Length = 78
Score = 56.0 bits (129), Expect = 1e-06
Identities = 27/35 (77%), Positives = 27/35 (77%)
Frame = -1
Query: 813 VSPGIRPRFXSQKMEAKLPEKKIPXTXAKATILSP 709
VSPGIRPRF SQ MEA PEKKIP T AKA LSP
Sbjct: 44 VSPGIRPRFLSQNMEANDPEKKIPSTAAKAISLSP 78
>UniRef50_Q81TB4 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit; n=17; Bacteria|Rep: Ribonucleoside-diphosphate
reductase, beta subunit - Bacillus anthracis
Length = 322
Score = 55.6 bits (128), Expect = 1e-06
Identities = 35/114 (30%), Positives = 56/114 (49%)
Frame = +2
Query: 326 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 505
+K+ A FWT EE+ +S D + W L E+ K VL D + +
Sbjct: 18 WKQNIAQFWTEEEIAVSSDKNTWVQLSKEEQIAYKRVLGGLTLLDTKQGGEGMPLVLVHL 77
Query: 506 QVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKA 667
+ +A+ F AME VH++ YS + T + +E D +F+ V+T P ++KKA
Sbjct: 78 ENLQAKSVLAFMGAMEEVHAKSYSHIFTT-LATEEEIDEIFDWVDTHPLLEKKA 130
>UniRef50_A7IXG5 Cluster: Putative uncharacterized protein b640L;
n=2; Chlorovirus|Rep: Putative uncharacterized protein
b640L - Paramecium bursaria Chlorella virus NY2A
(PBCV-NY2A)
Length = 139
Score = 54.8 bits (126), Expect = 2e-06
Identities = 42/128 (32%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Frame = -3
Query: 562 MNIFHGYLEAIETSCLSDLNFL*KSLNQVFIYNAI*SRKESKDMLDEMSLTIF*SL-PV* 386
MN F L IE SCL +F K ++F ++ + + KE ++M DE+S + L PV
Sbjct: 1 MNGFVECLICIELSCLWCHHFDTKVCLKIFHHDTVGACKEPQNMFDEVSFIVVQFLTPVC 60
Query: 385 *ILGQIDFLDGPKRSFSFLVHLPYIGVLNREDDKAPR-VLTQQRFLLWVELFEIFIEVHF 209
+ + +FL GPK LVH+P I +LN + + R V+ Q RFL ++ I+ +
Sbjct: 61 NVCVKRNFLGGPKGCHCLLVHVPQIMILNGKRRELTRSVVGQNRFLCCHSIYFIYNSTYK 120
Query: 208 LSQIVIFR 185
+++ I R
Sbjct: 121 YTRLSICR 128
>UniRef50_Q4YZT3 Cluster: Putative uncharacterized protein; n=1;
Plasmodium berghei|Rep: Putative uncharacterized protein
- Plasmodium berghei
Length = 65
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 3/48 (6%)
Frame = +2
Query: 221 DKNFEEFDPQKEP---LLRENPRRFVIFPIQYPDIWQMYKKAEASFWT 355
+K F +F KE +L + RF + PI YP++W YKKAEASFWT
Sbjct: 17 EKEFSDFQKTKESNEKILNKESNRFTLHPIIYPEVWNFYKKAEASFWT 64
>UniRef50_P37427 Cluster: Ribonucleoside-diphosphate reductase 1
subunit beta; n=171; root|Rep:
Ribonucleoside-diphosphate reductase 1 subunit beta -
Salmonella typhimurium
Length = 376
Score = 54.4 bits (125), Expect = 3e-06
Identities = 36/144 (25%), Positives = 65/144 (45%), Gaps = 1/144 (0%)
Frame = +2
Query: 242 DPQKEPLLRENPRRFVIFPIQYPDIWQ-MYKKAEASFWTVEEVDLSKDLSDWETLKDSER 418
D KEP+ P + Q DI++ + +K + FW EEVD+S+D D++ L + E+
Sbjct: 12 DQLKEPMFFGQPVNVARYDQQKYDIFEKLIEKQLSFFWRPEEVDVSRDRIDYQALPEHEK 71
Query: 419 HFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 598
H L + D I + + + E + E +HS Y+ +I +
Sbjct: 72 HIFISNLKYQTLLDSIQGRSPNVALLPLISIPELETWVETWAFSETIHSRSYTHIIRNIV 131
Query: 599 RDPKERDFLFNAVETLPCVKKKAD 670
DP +F+ + T ++K+A+
Sbjct: 132 NDPA---VVFDDIVTNEQIQKRAE 152
>UniRef50_O67475 Cluster: Ribonucleoside-diphosphate reductase
subunit beta (EC 1.17.4.1) (Ribonucleotide reductase
small subunit) [Contains: Aae nrdB intein (Aae RIR2
intein)]; n=1; Aquifex aeolicus|Rep:
Ribonucleoside-diphosphate reductase subunit beta (EC
1.17.4.1) (Ribonucleotide reductase small subunit)
[Contains: Aae nrdB intein (Aae RIR2 intein)] - Aquifex
aeolicus
Length = 696
Score = 54.4 bits (125), Expect = 3e-06
Identities = 34/133 (25%), Positives = 66/133 (49%), Gaps = 3/133 (2%)
Frame = +2
Query: 242 DPQKEPLLRENPRR-FVIFPIQYPDIWQMYK-KAEASFWTVEEVDLSKDLSDWET-LKDS 412
+ K +++ NP F + I+Y + +YK +FW EE+ + +D +ET L D
Sbjct: 22 EASKRKIIKGNPTNIFELNEIKYSWAFDLYKLMGFTNFWIPEEIQMLEDRKQYETVLSDY 81
Query: 413 ERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 592
E+ + VL+F A D ++++ F + + E Q E+VH+ Y ++++
Sbjct: 82 EKRAYELVLSFLIALDSF-QVDMLKEFGRMITAPEVEMAITAQEFQESVHAYSYQFILES 140
Query: 593 YIRDPKERDFLFN 631
+ DP + D ++N
Sbjct: 141 VV-DPVKADEIYN 152
>UniRef50_Q88YQ5 Cluster: Ribonucleoside-diphosphate reductase, beta
chain; n=6; Lactobacillales|Rep:
Ribonucleoside-diphosphate reductase, beta chain -
Lactobacillus plantarum
Length = 336
Score = 53.2 bits (122), Expect = 7e-06
Identities = 27/116 (23%), Positives = 55/116 (47%)
Frame = +2
Query: 326 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 505
++K FW + +S D++DW L D R + HV D + +++ ++ + V
Sbjct: 34 WEKLTEQFWLDTRIPVSNDMADWRELDDDHRWVVGHVFGGLTLLDTLQSQDGLQALRRNV 93
Query: 506 QVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADW 673
+ ME+VH++ YS + +T + P E + +F+ ++ ++ KA W
Sbjct: 94 LTSHETAVLNNIQFMESVHAKSYSTIFET-LNTPDEINEIFDWSDSEEFLQAKAQW 148
>UniRef50_P74732 Cluster: Slr0591 protein; n=9; Bacteria|Rep:
Slr0591 protein - Synechocystis sp. (strain PCC 6803)
Length = 355
Score = 53.2 bits (122), Expect = 7e-06
Identities = 27/117 (23%), Positives = 59/117 (50%)
Frame = +2
Query: 323 MYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQE 502
+Y++ +FW + +D+++D++D+ L + ER+ +L++ D + N +
Sbjct: 53 LYQQMRENFWIPQRLDITQDVTDYWNLTNEERYAFDGILSYLTFLDSVQTCN-IPHLKSS 111
Query: 503 VQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADW 673
V E QI+ E +H++ Y +I+T I K RD ++ T +K++ ++
Sbjct: 112 VTAPEISLCMAEQISQEGMHNQSYQYMIETIIPTEK-RDKVYEFWRTDRVLKERCEY 167
>UniRef50_Q8TGJ8 Cluster: Uncharacterized protein YJL026C-A; n=2;
Saccharomycetaceae|Rep: Uncharacterized protein
YJL026C-A - Saccharomyces cerevisiae (Baker's yeast)
Length = 73
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/38 (68%), Positives = 27/38 (71%)
Frame = -1
Query: 813 VSPGIRPRFXSQKMEAKLPEKKIPXTXAKATILSPNVA 700
V PGI P F +QKMEAK PEKK P AKAT LSPN A
Sbjct: 33 VKPGIIPLFFNQKMEAKEPEKKTPSMEAKATSLSPNKA 70
>UniRef50_Q8SCK7 Cluster: PHIKZ305; n=1; Pseudomonas phage
phiKZ|Rep: PHIKZ305 - Pseudomonas phage phiKZ
Length = 387
Score = 50.8 bits (116), Expect = 4e-05
Identities = 32/121 (26%), Positives = 59/121 (48%), Gaps = 2/121 (1%)
Frame = +2
Query: 254 EPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKH 433
E +L ++P YP +W++YK+ + W E D S L ++ET S +
Sbjct: 23 EIILGDDPGLLDSIHTHYPKMWELYKRLKMLDWDELEFDFSTCLVEFETCDKSTYDMMIK 82
Query: 434 VLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMEN--VHSEMYSLLIDTYIRDP 607
LA+ +D + + ++V S +T++R + G+ +N VH+ YS ++ +DP
Sbjct: 83 TLAWQWEADSVASRSIVNILSP--VMTDSRVWAGYVRINDNEDVHALTYSEIVRNSFKDP 140
Query: 608 K 610
K
Sbjct: 141 K 141
>UniRef50_A4C9Q5 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=10; root|Rep: Ribonucleotide-diphosphate
reductase beta subunit - Pseudoalteromonas tunicata D2
Length = 376
Score = 50.4 bits (115), Expect = 5e-05
Identities = 32/123 (26%), Positives = 56/123 (45%)
Frame = +2
Query: 302 QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENL 481
++P ++ +K + FW EEVD+SKD D+E L D E+H L + D I +
Sbjct: 33 KHPIFEKLIEKQLSFFWRPEEVDVSKDRVDFENLPDHEKHIFLSNLKYQTLLDSIQGRSP 92
Query: 482 VERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKK 661
V + E + E +HS Y+ +I + P + +F+ + +K+
Sbjct: 93 NVALLPIVSLPELETWIETWSFSETIHSRSYTHIIRNVTKQP---ELIFDDIVDNDKIKE 149
Query: 662 KAD 670
+AD
Sbjct: 150 RAD 152
>UniRef50_Q1VIC2 Cluster: Ribonucleotide-diphosphate reductase beta
subunit; n=1; Psychroflexus torquis ATCC 700755|Rep:
Ribonucleotide-diphosphate reductase beta subunit -
Psychroflexus torquis ATCC 700755
Length = 270
Score = 49.6 bits (113), Expect = 9e-05
Identities = 33/126 (26%), Positives = 53/126 (42%), Gaps = 1/126 (0%)
Frame = +2
Query: 299 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 478
++YP I ++ +K FW EEVD+SKD D+ L + E+H L D +
Sbjct: 30 VKYPQIEKITEKQLGFFWRPEEVDVSKDKKDFHELTEHEQHIFTSNLKRQILLDSVQGRA 89
Query: 479 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE-RDFLFNAVETLPCV 655
F V + E + E +HS Y+ +I DP D + + E + C
Sbjct: 90 PNLAFLPHVSLPEVENWIETWSFFETIHSRSYTHIIRNIYPDPSAVFDKMLDIKEIIECG 149
Query: 656 KKKADW 673
A++
Sbjct: 150 NDIAEY 155
>UniRef50_Q8Y5B3 Cluster: Lmo2154 protein; n=26; Bacteria|Rep:
Lmo2154 protein - Listeria monocytogenes
Length = 349
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/122 (20%), Positives = 54/122 (44%)
Frame = +2
Query: 299 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 478
I YP ++ YK+ ++W +EVD+ D + L + E++ ++ A D
Sbjct: 39 IPYPSFYRAYKELSTNYWIPDEVDMKSDAKQYPALSEQEKYAFDAIIGLLATLDS-PQTR 97
Query: 479 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVK 658
+ ++ + E +H+E YS ++ + I + +E++ +F T P +
Sbjct: 98 FIYNIAEYITDPAVHANAAIIAQQEVIHNESYSYVLAS-ITNLQEQNRVFELARTHPTII 156
Query: 659 KK 664
K+
Sbjct: 157 KR 158
>UniRef50_Q678G9 Cluster: Ribonucleotide reductase; n=2;
Lymphocystivirus|Rep: Ribonucleotide reductase -
Lymphocystis disease virus - isolate China
Length = 374
Score = 48.4 bits (110), Expect = 2e-04
Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +2
Query: 296 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE--TLKDSERHFIKHVLAFFAASDGIV 469
P YP ++ E WT +E+ L+ D++DW+ L D E+ FI +L F D V
Sbjct: 73 PFHYPWAVELRSLHENMHWTEKEISLADDVTDWKIGKLLDVEKKFITQILRLFTQLDVSV 132
Query: 470 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 592
+ F + E R E H + Y+LL DT
Sbjct: 133 GQLYHNTFIPIFKNNEIRNMLCSFACREGTHQQAYALLNDT 173
>UniRef50_Q9Z5C7 Cluster: Ribonucleotide reductase minor subunit;
n=21; root|Rep: Ribonucleotide reductase minor subunit -
Staphylococcus aureus
Length = 323
Score = 48.0 bits (109), Expect = 3e-04
Identities = 30/121 (24%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +2
Query: 311 DIWQMYKKAEAS-FWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVE 487
D+ M+ + S W E +SKD++ W+TL ++E+ K LA D ++ +
Sbjct: 11 DMTNMFWRQNISQMWVETEFKVSKDIASWKTLSEAEQDTFKKALAGLTGLDTHQADDGMP 70
Query: 488 RFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKA 667
+ Y F ME +H++ YS + T + + L V P +K K+
Sbjct: 71 LVMLHTTDLRKKAVYSFMAMMEQIHAKSYSHIFTTLLPSSETNYLLDEWVLEEPHLKYKS 130
Query: 668 D 670
D
Sbjct: 131 D 131
>UniRef50_Q5GQI6 Cluster: Ribonucleotide reductase B subunit; n=3;
Myoviridae|Rep: Ribonucleotide reductase B subunit -
Cyanophage phage S-PM2
Length = 394
Score = 46.4 bits (105), Expect = 9e-04
Identities = 26/104 (25%), Positives = 43/104 (41%)
Frame = +2
Query: 302 QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENL 481
+YP ++ ++ FW EEV L KD +D++ L+ ++H L + D +
Sbjct: 49 KYPVFDKLTQQQLGYFWRPEEVSLQKDRADYQQLRPEQKHIFTSNLKYQIMLDSVQGRGP 108
Query: 482 VERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 613
F + E ME VHS Y+ +I DP +
Sbjct: 109 GMAFMPYCSLPELESAMNIWQTMEMVHSRSYTHIIKNIYPDPSD 152
>UniRef50_Q7DA78 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit, putative; n=17; Actinomycetales|Rep:
Ribonucleoside-diphosphate reductase, beta subunit,
putative - Mycobacterium tuberculosis
Length = 314
Score = 45.6 bits (103), Expect = 0.002
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
Frame = +2
Query: 320 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFS- 496
+++ A FW ++D ++D +DWE L D ER + + F A + V E++ S
Sbjct: 22 KLFAGGNAKFWDPADIDFTRDRADWEKLSDDERDYATRLCTQFIAGEEAVTEDIQPFMSA 81
Query: 497 QEVQVTEARCFYGFQIAMENV-HSEMYSLLID 589
+ A Y Q A E H++++ + +D
Sbjct: 82 MRAEGRLADEMYLTQFAFEEAKHTQVFRMWLD 113
>UniRef50_Q8VB16 Cluster: Wsv189; n=1; Shrimp white spot syndrome
virus|Rep: Wsv189 - White spot syndrome virus (WSSV)
Length = 101
Score = 44.8 bits (101), Expect = 0.003
Identities = 28/84 (33%), Positives = 43/84 (51%)
Frame = -3
Query: 562 MNIFHGYLEAIETSCLSDLNFL*KSLNQVFIYNAI*SRKESKDMLDEMSLTIF*SLPV** 383
MN H LE ET +L L K+ ++F YN++ KE +++ +E+ L + LP+
Sbjct: 1 MNTLHSNLEVKETPRFWNLRHLTKTCCKIFNYNSVRGCKERQNLENEILLILSEFLPIFR 60
Query: 382 ILGQIDFLDGPKRSFSFLVHLPYI 311
I +I+ PK F VH P I
Sbjct: 61 IPFEINLFQCPKTGNLFFVHFPEI 84
>UniRef50_Q8ELX7 Cluster: Ribonucleoside-diphosphate reductase beta
subunit; n=4; root|Rep: Ribonucleoside-diphosphate
reductase beta subunit - Oceanobacillus iheyensis
Length = 347
Score = 44.8 bits (101), Expect = 0.003
Identities = 24/102 (23%), Positives = 47/102 (46%), Gaps = 2/102 (1%)
Frame = +2
Query: 299 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 478
I YP ++MYK+ ++W +EV++S D+ + TL E+ ++ + D
Sbjct: 37 IAYPHWYKMYKRLVGNYWQADEVNMSSDVKQFSTLSKEEQDAYLKIIGLLSTLDAPQTRT 96
Query: 479 --LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 598
L+ ++ + V Q E VH+E YS ++ + +
Sbjct: 97 ALLISLYATDPSVQSIMAVIAQQ---EAVHNESYSYVLSSVV 135
>UniRef50_Q01038 Cluster: Ribonucleoside-diphosphate reductase small
chain; n=19; Herpesviridae|Rep:
Ribonucleoside-diphosphate reductase small chain -
Saimiriine herpesvirus 2 (strain 11) (SaHV-2)
(Herpesvirus saimiri)
Length = 305
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/95 (23%), Positives = 49/95 (51%)
Frame = +2
Query: 320 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQ 499
++ K+ + W +V L D+ + L + + F K + F ++ +VN N+ + SQ
Sbjct: 18 ELTKETWKNRWFPSQVPLQGDVCCVDMLNERDLEFYKFLFTFLGMAEKLVNINIEDLLSQ 77
Query: 500 EVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRD 604
+ +Y Q+AMEN+H ++Y+ +++ ++
Sbjct: 78 -FDSHDISHYYAEQMAMENIHGKVYANILNMLFKN 111
>UniRef50_A7K7Z8 Cluster: Putative uncharacterized protein z038R;
n=1; Chlorella virus ATCV-1|Rep: Putative
uncharacterized protein z038R - Chlorella virus ATCV-1
Length = 104
Score = 43.6 bits (98), Expect = 0.006
Identities = 27/58 (46%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = -1
Query: 465 MPSEAAKKARTCLMKCLSLSFKVXXXXXXX-XXXXXXTVQNEASAFLYICHISGY*IG 295
MPS AKK R CLMK S SF TVQ A+AFLYI +SGY +G
Sbjct: 1 MPSLPAKKPRMCLMKWRSSSFSFSRQSTTSWLSWTSSTVQKVATAFLYIWKMSGYRMG 58
>UniRef50_Q4J6V7 Cluster: Ribonucleoside-diphosphate reductase; n=3;
Sulfolobus|Rep: Ribonucleoside-diphosphate reductase -
Sulfolobus acidocaldarius
Length = 314
Score = 43.2 bits (97), Expect = 0.008
Identities = 24/95 (25%), Positives = 46/95 (48%), Gaps = 4/95 (4%)
Frame = +2
Query: 320 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQ 499
++Y+ + FW ++D SKD DW+ L E++++ ++++ F A + V ++ S
Sbjct: 33 KLYQIGKRLFWDPAKIDFSKDKEDWKKLSKDEKNYLLNIVSLFMAGEEAVAVDITPLIS- 91
Query: 500 EVQVTEAR---CFYGFQIAMENV-HSEMYSLLIDT 592
+ E R Y Q A E H+E + D+
Sbjct: 92 -TMINEGRVEDVIYLEQFAFEEAKHAEAFRRFCDS 125
>UniRef50_Q9KFH7 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=5; Bacillaceae|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Bacillus halodurans
Length = 345
Score = 42.7 bits (96), Expect = 0.011
Identities = 21/100 (21%), Positives = 49/100 (49%)
Frame = +2
Query: 299 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 478
+++ + +YK A+FWT E+++S D + TL ++E+ K ++ A D + +
Sbjct: 35 VRFSWAYPLYKNMLANFWTPFEINMSHDAKQFPTLTETEQEAFKKIIGLLAFLDSVQTDY 94
Query: 479 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYI 598
+ R ++ + + E VH++ YS ++ + +
Sbjct: 95 SM-RAAEYLTDSSLAALMSVLSFQEVVHNQSYSYVLSSLV 133
>UniRef50_A6EC16 Cluster: Ribonucleotide-diphosphate; n=1;
Pedobacter sp. BAL39|Rep: Ribonucleotide-diphosphate -
Pedobacter sp. BAL39
Length = 327
Score = 41.5 bits (93), Expect = 0.024
Identities = 25/107 (23%), Positives = 45/107 (42%)
Frame = +2
Query: 347 FWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARC 526
FW E SKD+ W++L + K L D + + + + + + +
Sbjct: 28 FWVDTEYIPSKDIDSWKSLSPEIQQVYKRALGGLTLLDTLQSHTGMPKLLDHIDGLQNKA 87
Query: 527 FYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKA 667
F ME +H++ YS + T + E + LF+ VE ++ KA
Sbjct: 88 VLSFMCMMEAIHAKSYSTIFTT-VNSTPEINELFDWVENNKLLQFKA 133
>UniRef50_Q6KG86 Cluster: Putative ribonucleoside diphosphate
reductase beta chain; n=2; Enterobacteria phage Felix
01|Rep: Putative ribonucleoside diphosphate reductase
beta chain - Enterobacteria phage Felix 01
Length = 377
Score = 40.7 bits (91), Expect = 0.043
Identities = 24/102 (23%), Positives = 51/102 (50%)
Frame = +2
Query: 305 YPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLV 484
YP I+++YK+ +A W+ +E + D+E++ S + +L + +D V ++L
Sbjct: 43 YPKIFELYKQQKAQDWSEDEFPFEQSRLDFESVPASMSGVMLEILKWQWEADTQVAKSLA 102
Query: 485 ERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPK 610
F+ + Q +EN+H+ YS ++ I++P+
Sbjct: 103 FAFAPFISDDIYATAIMKQSEIENLHALTYSEIVRQCIKNPE 144
>UniRef50_Q4J6S8 Cluster: Ribonucleotide reductase, small chain;
n=1; Sulfolobus acidocaldarius|Rep: Ribonucleotide
reductase, small chain - Sulfolobus acidocaldarius
Length = 330
Score = 40.7 bits (91), Expect = 0.043
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +2
Query: 320 QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLV 484
++++ E WT E+D SKD DW+ LK S+R K + ++F A + V +++
Sbjct: 35 RLFEIGEKFRWTAYELDFSKDREDWKKLKPSDRTQNKIISSYFLAGEECVARDIL 89
>UniRef50_A7KUZ8 Cluster: Nrd beta subunit; n=1; Bacillus phage
0305phi8-36|Rep: Nrd beta subunit - Bacillus phage
0305phi8-36
Length = 352
Score = 39.9 bits (89), Expect = 0.075
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 3/121 (2%)
Frame = +2
Query: 311 DIW-QMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVE 487
+IW + + EA+FW E+ + +D W++L E+ V A D + + ++E
Sbjct: 45 EIWYDISQTLEANFWRPVEIKMKEDEKMWDSLTPIEQDTFLRVGTALACLDSLQVKAILE 104
Query: 488 --RFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKK 661
RF+ + F Q E H+ YS + + +R P + + FN P + K
Sbjct: 105 VIRFTTNSALANISAFIAQQ---EATHTTSYSYITSSLVRLPVQNQY-FNETMKHPVLAK 160
Query: 662 K 664
+
Sbjct: 161 R 161
>UniRef50_P50621 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=14; root|Rep: Ribonucleoside-diphosphate
reductase subunit beta - Bacillus subtilis
Length = 329
Score = 39.5 bits (88), Expect = 0.099
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 2/121 (1%)
Frame = +2
Query: 311 DIWQM-YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVE 487
D QM Y + FW EE+ L+ DL W+ L +E+ VLA D +
Sbjct: 16 DFTQMFYNQNVKQFWLPEEIALNGDLLTWKYLGKNEQDTYMKVLAGLTLLDTEQGNTGMP 75
Query: 488 RFSQEVQVTEARCFYGFQIAMEN-VHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKK 664
++ V + + F MEN VH++ YS + T + + + +F V+ ++KK
Sbjct: 76 IVAEHVDGHQRKAVLNFMAMMENAVHAKSYSNIFMT-LAPTETINEVFEWVKQNKYLQKK 134
Query: 665 A 667
A
Sbjct: 135 A 135
>UniRef50_Q5HMW6 Cluster: Ribonucleoside-diphosphate reductase 2,
beta subunit; n=1; Staphylococcus epidermidis RP62A|Rep:
Ribonucleoside-diphosphate reductase 2, beta subunit -
Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Length = 340
Score = 39.1 bits (87), Expect = 0.13
Identities = 28/113 (24%), Positives = 43/113 (38%)
Frame = +2
Query: 326 YKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEV 505
+K+ WT EE SKDLS W+TL E+ L+ D + +
Sbjct: 23 WKQNVKQMWTEEEFKPSKDLSVWKTLSADEQETYVKALSGLTGLDTTQGTEGMPLLAFHY 82
Query: 506 QVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKK 664
R + F MEN+H + YS + + + +L V + KK
Sbjct: 83 PEEIWRGVFAFMSMMENIHHKSYSHIFTSLLERKDTHYYLKEWVPANKYLNKK 135
>UniRef50_P55983 Cluster: Ribonucleoside-diphosphate reductase
subunit beta; n=27; Epsilonproteobacteria|Rep:
Ribonucleoside-diphosphate reductase subunit beta -
Helicobacter pylori (Campylobacter pylori)
Length = 341
Score = 39.1 bits (87), Expect = 0.13
Identities = 25/110 (22%), Positives = 48/110 (43%)
Frame = +2
Query: 284 FVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDG 463
F + I+Y ++K A+ W EEV ++ D D+ L E+ LA D
Sbjct: 31 FDLNKIKYQWADHLWKTMLANTWFAEEVSMNDDKRDYLKLSAEEKIGYDRALAQLIFMDS 90
Query: 464 IVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 613
+ NL++ + + E Q E +HS Y++++++ + +E
Sbjct: 91 LQANNLIDNINPFITSPEINLCLVRQAYEEALHSHAYAVMVESISANTEE 140
>UniRef50_Q6QGJ3 Cluster: Putative aerobic ribonucleoside
diphosphate reductase, small subunit; n=1;
Enterobacteria phage T5|Rep: Putative aerobic
ribonucleoside diphosphate reductase, small subunit -
Bacteriophage T5
Length = 381
Score = 38.7 bits (86), Expect = 0.17
Identities = 24/105 (22%), Positives = 41/105 (39%)
Frame = +2
Query: 299 IQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNEN 478
+ +P++ ++ A + FWT E+ L D W L + LA+ +D ++
Sbjct: 30 VAHPELERLALLARSQFWTETEISLEADKKQWPNLPREIQEITLLNLAWQTQTDSFISRA 89
Query: 479 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKE 613
V E E++HS YS +I + DP E
Sbjct: 90 PEAAIMPLVSRPELEGMLKQWSYFEDLHSRAYSNIIRNVLTDPAE 134
>UniRef50_Q6BK07 Cluster: Protein STU1; n=2; cellular organisms|Rep:
Protein STU1 - Debaryomyces hansenii (Yeast)
(Torulaspora hansenii)
Length = 1529
Score = 38.7 bits (86), Expect = 0.17
Identities = 19/71 (26%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Frame = +2
Query: 86 TMAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLL 265
+++ K N GIN + ++Q MK++ N + M+ FE FD Q +P+L
Sbjct: 731 SVSSNAKKHNDSQGINADAQIQNIETMKSTYSVDDNSSNRTNMEQTNKFESFDKQSDPIL 790
Query: 266 R---ENPRRFV 289
+ N + F+
Sbjct: 791 KFLSSNQKEFI 801
>UniRef50_UPI00015B5EF5 Cluster: PREDICTED: similar to CG9246-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
CG9246-PA - Nasonia vitripennis
Length = 744
Score = 38.3 bits (85), Expect = 0.23
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 3/101 (2%)
Frame = +2
Query: 104 DKENLH-SGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPR 280
D EN+ S E Q K P++ + K+ TE N ++ DP+ L+EN +
Sbjct: 66 DFENMDLSDAEDEELEQEKQPVEAAKTLKKSKKKTEHKKALMNLQDTDPEFFKYLKENDK 125
Query: 281 RFVIFPI--QYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 397
R + F I ++ + ++++ T++E+++ D SD+E
Sbjct: 126 RLLDFNIDDDGDNMSEADEESKVHVPTIDELEIGSDESDYE 166
>UniRef50_Q6QXF7 Cluster: ORF38; n=3; Baculoviridae|Rep: ORF38 -
Agrotis segetum granulosis virus (AsGV) (Agrotis
segetumgranulovirus)
Length = 369
Score = 38.3 bits (85), Expect = 0.23
Identities = 23/99 (23%), Positives = 46/99 (46%)
Frame = +2
Query: 290 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIV 469
I+P Y W Y+ +A++W+ E + +D+S + L + + H A A D V
Sbjct: 38 IWPPTYAPSWHYYQLHQANYWSATEHEPLEDVSGFIKLDSQWQKAVLHSFAILAIGDDAV 97
Query: 470 NENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLI 586
+ + E + + T+ + Q A E +H +Y+ ++
Sbjct: 98 MQFIDENDLEWEECTQ--WMFKDQGARETIHKIVYNKML 134
>UniRef50_Q4J6S5 Cluster: Putative uncharacterized protein; n=1;
Sulfolobus acidocaldarius|Rep: Putative uncharacterized
protein - Sulfolobus acidocaldarius
Length = 345
Score = 37.5 bits (83), Expect = 0.40
Identities = 23/95 (24%), Positives = 45/95 (47%), Gaps = 4/95 (4%)
Frame = +2
Query: 320 QMYKKAEASFWTVEEVD--LSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERF 493
+++ K+ FW+ + + +D DWET+ +SER +++ F+A + V+ L E
Sbjct: 33 RLWAKSNELFWSPLQFKELIQQDKQDWETMSESEREISEYIATAFSAGEEAVSRYLAELV 92
Query: 494 --SQEVQVTEARCFYGFQIAMENVHSEMYSLLIDT 592
E+ TE F E H++ + +D+
Sbjct: 93 IALDELGYTEEVLFLNQFQQEETRHTDAFRRWMDS 127
>UniRef50_A4L226 Cluster: Ribonucleotide reductase small subunit;
n=1; Gryllus bimaculatus nudivirus|Rep: Ribonucleotide
reductase small subunit - Gryllus bimaculatus nudivirus
Length = 371
Score = 35.9 bits (79), Expect = 1.2
Identities = 24/91 (26%), Positives = 40/91 (43%)
Frame = +2
Query: 317 WQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFS 496
+ + K A W+ EE+ LSKD + + + + +L A D IV +NL + S
Sbjct: 72 YNFWLKQVALAWSPEEISLSKDKATFHRAPEQLKKISACMLGMLAIGDNIVLQNLSD-VS 130
Query: 497 QEVQVTEARCFYGFQIAMENVHSEMYSLLID 589
+ + Q +E HS+ YS +D
Sbjct: 131 EIITNNYVLNAISRQEDVEKTHSDFYSRSLD 161
>UniRef50_A3I5A8 Cluster: Ribonucleotide-diphosphate; n=1; Bacillus
sp. B14905|Rep: Ribonucleotide-diphosphate - Bacillus
sp. B14905
Length = 322
Score = 35.5 bits (78), Expect = 1.6
Identities = 27/110 (24%), Positives = 52/110 (47%), Gaps = 3/110 (2%)
Frame = +2
Query: 350 WTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGI---VNENLVERFSQEVQVTEA 520
W EE+ +SKD+ W++ + + + K V A D + + N V ++ ++Q
Sbjct: 31 WFPEEIAVSKDIKQWKSFEHQDTY--KKVFAGLTLLDTVQTNIGMNRVAAYTDDLQEKAV 88
Query: 521 RCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKAD 670
+ A E +H++ YS + T + +E D LF V+ ++ KA+
Sbjct: 89 LTVFD---AFEAIHAKSYSYIFTTLCTN-EEIDELFEWVKKNEYLQYKAN 134
>UniRef50_Q8I385 Cluster: Putative uncharacterized protein PFI0315c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0315c - Plasmodium falciparum
(isolate 3D7)
Length = 837
Score = 35.1 bits (77), Expect = 2.1
Identities = 17/57 (29%), Positives = 29/57 (50%)
Frame = +2
Query: 104 DKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLREN 274
D +N+H+ IN N + + N++ N+N ++ D N F P KE L++ N
Sbjct: 552 DNDNIHNSINNNNTINMNN--NNNINNINNNNNINSINRDINKNIFTPDKERLIKIN 606
>UniRef50_UPI000155436B Cluster: hypothetical protein ORF027; n=1;
Pseudomonas phage PA11|Rep: hypothetical protein ORF027
- Pseudomonas phage PA11
Length = 322
Score = 34.7 bits (76), Expect = 2.8
Identities = 34/136 (25%), Positives = 64/136 (47%), Gaps = 20/136 (14%)
Frame = +2
Query: 293 FPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE-TLKDSERHFIKHVLAFFAASDGIV 469
+ YP+ Q K + FWT +E+++ KD+ D + ++E H + L F + +
Sbjct: 11 YTFDYPEAIQFAKVQSSIFWTDDEINVEKDIQDIRVNMTEAEAHGVITTLRLFTLYELVA 70
Query: 470 NEN-----LVERFSQEVQVTEARCFYGFQIAMENVHSEMY-----SLLIDT------YIR 601
+ +++ F + A F F++ NVH+ Y +L+++T Y+
Sbjct: 71 GRDYWLGRVLKTFPRPDIERMAATFGFFEL---NVHAPFYNKINEALMLNTDEFYLAYVN 127
Query: 602 DP--KER-DFLFNAVE 640
DP KER +F+ + VE
Sbjct: 128 DPILKERMEFVDSLVE 143
>UniRef50_A5IYM2 Cluster: Putative uncharacterized protein; n=1;
Mycoplasma agalactiae|Rep: Putative uncharacterized
protein - Mycoplasma agalactiae
Length = 222
Score = 34.7 bits (76), Expect = 2.8
Identities = 24/64 (37%), Positives = 35/64 (54%)
Frame = +2
Query: 89 MAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLR 268
+A ENL+SG ++ Q K+ KNS A K D+ +E +DK E P+K+ L
Sbjct: 21 VAAKCGNENLNSGKEDKSDSQNKTE-KNSG-ADKKDSTSENSTIDKKENESAPKKQ-LKN 77
Query: 269 ENPR 280
ENP+
Sbjct: 78 ENPK 81
>UniRef50_A5FCJ5 Cluster: Ribonucleotide reductase; n=1;
Flavobacterium johnsoniae UW101|Rep: Ribonucleotide
reductase - Flavobacterium johnsoniae UW101
Length = 324
Score = 34.7 bits (76), Expect = 2.8
Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 4/130 (3%)
Frame = +2
Query: 296 PIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVLAFFAASDGIVN 472
P +YP++ Q + ++W EVD + D D+ L +E+ +K+ L A + V
Sbjct: 12 PFEYPEVLQFTEAINKAYWVHTEVDFTADTQDFHAHLSLAEKTAVKNSLLAIAQIEVAVK 71
Query: 473 E---NLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVET 643
N+ E F + E E HSE YS L++ + + F +
Sbjct: 72 SFWGNIYEHFPK----PEFNGLGSTFAECEFRHSEAYSRLLEVLGYNDE-----FEKLLD 122
Query: 644 LPCVKKKADW 673
+P ++++ D+
Sbjct: 123 VPVIRRRVDY 132
>UniRef50_P77402 Cluster: Uncharacterized HTH-type transcriptional
regulator ydiP; n=17; Enterobacteriaceae|Rep:
Uncharacterized HTH-type transcriptional regulator ydiP
- Escherichia coli (strain K12)
Length = 303
Score = 34.7 bits (76), Expect = 2.8
Identities = 26/136 (19%), Positives = 54/136 (39%)
Frame = +2
Query: 110 ENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFV 289
EN + E K + +L N+N E++ L++ ++F + E + +
Sbjct: 163 ENFKNAYRSEQGYIKKDVLIKDILFYLNNNYREKITLEQLSKKFRASVSYICHEFTKEYR 222
Query: 290 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIV 469
I PI Y + ++ + W++ +LS+ W ++ HF K L S
Sbjct: 223 ISPINYV----IQRRMTEAKWSLTNTELSQAEISWRVGYENVDHFAKLFLRHVGCSPSDY 278
Query: 470 NENLVERFSQEVQVTE 517
F+++ ++E
Sbjct: 279 RRQFKNCFAEQEILSE 294
>UniRef50_Q1MP70 Cluster: Putative outer protein N; n=1; Lawsonia
intracellularis PHE/MN1-00|Rep: Putative outer protein N
- Lawsonia intracellularis (strain PHE/MN1-00)
Length = 398
Score = 33.9 bits (74), Expect = 4.9
Identities = 21/58 (36%), Positives = 29/58 (50%)
Frame = +2
Query: 77 RQ*TMAPTVDKENLHSGINGENRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQ 250
+Q T A + KE H G GEN T M ++A KN+N +DK ++ DPQ
Sbjct: 273 KQCTTALSRWKEK-HKG-GGENSTLTPLEMMRELIALKNENFISPSSIDKIVDQADPQ 328
>UniRef50_A6LGQ5 Cluster: Putative Fe-S oxidoreductase; n=1;
Parabacteroides distasonis ATCC 8503|Rep: Putative Fe-S
oxidoreductase - Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC11152)
Length = 478
Score = 33.9 bits (74), Expect = 4.9
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +2
Query: 170 NSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLREN 274
NS+L + ++N ++D+DKN E+ QK+ LREN
Sbjct: 20 NSILLSPSENEYVDIDMDKNAYEYYKQKDFFLREN 54
>UniRef50_A3J9D7 Cluster: TRNA-dihydrouridine synthase A; n=1;
Marinobacter sp. ELB17|Rep: TRNA-dihydrouridine synthase
A - Marinobacter sp. ELB17
Length = 264
Score = 33.5 bits (73), Expect = 6.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 338 EASFWTVEEVDLSKDLSDWETLKDSERHFIK 430
E S WT++++ S DL DW+ + D R IK
Sbjct: 70 EFSGWTLDQISTSSDLLDWQLVVDQNRIMIK 100
>UniRef50_Q5ZGC8 Cluster: Putative uncharacterized protein; n=1;
Flavobacterium phage 11b|Rep: Putative uncharacterized
protein - Flavobacterium phage 11b
Length = 154
Score = 33.5 bits (73), Expect = 6.5
Identities = 24/90 (26%), Positives = 41/90 (45%)
Frame = +2
Query: 140 NRVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIW 319
N++QTK +K A D T +++ KN E D EP+ +N F++ Y ++
Sbjct: 24 NKIQTKEVVKIDSTAKIVDKETIKIETKKNIENEDYYYEPI--DNKSEFIVDGKVYKNVH 81
Query: 320 QMYKKAEASFWTVEEVDLSKDLSDWETLKD 409
+KK + + + EV +D KD
Sbjct: 82 IKHKK-QKDYTNIAEVKTFDKKTDISVKKD 110
>UniRef50_Q95S88 Cluster: GM05661p; n=4; Sophophora|Rep: GM05661p -
Drosophila melanogaster (Fruit fly)
Length = 376
Score = 33.5 bits (73), Expect = 6.5
Identities = 23/95 (24%), Positives = 43/95 (45%)
Frame = +2
Query: 152 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 331
T+ P+ N +L+T + E+ L + + ++ +L + ++ FPI W+
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298
Query: 332 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 436
+ S E + L + L DW K RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329
>UniRef50_Q8YTL8 Cluster: Sensor protein; n=2; Nostocaceae|Rep:
Sensor protein - Anabaena sp. (strain PCC 7120)
Length = 920
Score = 33.1 bits (72), Expect = 8.6
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 IFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIV 469
+FP ++W+ KK++A WT EE++L+K++ + + V AF + V
Sbjct: 377 MFPRVSFNLWRDAKKSQAQEWTSEEIELAKEIGQHFASAIQQYELYQQVQAFNENLEKQV 436
Query: 470 NENLVE-RFSQEVQ 508
+ +E R + E Q
Sbjct: 437 QKRTLELRHTSEQQ 450
>UniRef50_A3XHF9 Cluster: Ribonucleoside-diphosphate reductase, beta
subunit 1; n=9; cellular organisms|Rep:
Ribonucleoside-diphosphate reductase, beta subunit 1 -
Leeuwenhoekiella blandensis MED217
Length = 427
Score = 33.1 bits (72), Expect = 8.6
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 278 RRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWET-LKDSERHFIKHVL 439
+R + P +YP++ + S+W E + + D+ D++T L + ER IK+ +
Sbjct: 109 KRINLKPYEYPELNEYVAAIRHSYWIHTEFNFTSDIQDFKTGLSEVERSAIKNTM 163
>UniRef50_O43272 Cluster: Proline oxidase, mitochondrial precursor;
n=33; Euteleostomi|Rep: Proline oxidase, mitochondrial
precursor - Homo sapiens (Human)
Length = 516
Score = 33.1 bits (72), Expect = 8.6
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 3/89 (3%)
Frame = +2
Query: 332 KAEASFW-TVEEVDLS--KDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQE 502
+AE W T E + +S DL DW +L DS KH++ A + + E L+ RF++E
Sbjct: 210 RAEIEDWFTAETLGVSGTMDLLDWSSLIDSRTKLSKHLVVPNAQTGQL--EPLLSRFTEE 267
Query: 503 VQVTEARCFYGFQIAMENVHSEMYSLLID 589
++ R + + L++D
Sbjct: 268 EELQMTRMLQRMDVLAKKATEMGVRLMVD 296
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 761,564,051
Number of Sequences: 1657284
Number of extensions: 14859820
Number of successful extensions: 39178
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 37541
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39119
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 70377768045
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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