Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_N24
         (813 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   1.3  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   1.3  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   1.3  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    24   1.7  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    23   3.8  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    22   6.7  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   8.8  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   8.8  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   8.8  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/54 (20%), Positives = 26/54 (48%)
 Frame = -3

Query: 253 LLWVELFEIFIEVHFLSQIVIFRSQYTIFHGRLRLHTVFTVDSAMKILFINSRS 92
           ++ + L  + + V FL  +      +T++H    LH +  ++    + +IN R+
Sbjct: 129 IIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRA 182


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/54 (20%), Positives = 26/54 (48%)
 Frame = -3

Query: 253 LLWVELFEIFIEVHFLSQIVIFRSQYTIFHGRLRLHTVFTVDSAMKILFINSRS 92
           ++ + L  + + V FL  +      +T++H    LH +  ++    + +IN R+
Sbjct: 129 IIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRA 182


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/54 (20%), Positives = 26/54 (48%)
 Frame = -3

Query: 253 LLWVELFEIFIEVHFLSQIVIFRSQYTIFHGRLRLHTVFTVDSAMKILFINSRS 92
           ++ + L  + + V FL  +      +T++H    LH +  ++    + +IN R+
Sbjct: 129 IIIISLGCLILAVVFLLTLSALLEGFTLYHTTAYLHIITMINMNCALWYINCRA 182


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -1

Query: 654 TQGRVSTALNRKSLSFGSLMY 592
           T GR+   +NR ++SF SL Y
Sbjct: 292 TPGRLKDFVNRGNVSFNSLKY 312


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 548 MENVHSEMYSLLIDTYIRDPKERDFLFNAVETL 646
           +EN+ S+ Y + I T   DP+ R+ L N    +
Sbjct: 433 LENLPSDKYIIQIWTTGSDPQVRNLLDNGYRVI 465


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 14/51 (27%), Positives = 21/51 (41%)
 Frame = -3

Query: 226 FIEVHFLSQIVIFRSQYTIFHGRLRLHTVFTVDSAMKILFINSRSHCLLPF 74
           F++ HF   + ++   ++ F G   LH V       KI    S     LPF
Sbjct: 86  FMKYHFFGTLKLWSQLFSTFAGIEVLHVVKQCYHLQKINVQQSGIFINLPF 136


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 765 KLPEKKIPXTXAKATILSPNVA 700
           K+P  + P T + + + SPN A
Sbjct: 213 KIPPAEFPTTSSSSALESPNPA 234


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 765 KLPEKKIPXTXAKATILSPNVA 700
           K+P  + P T + + + SPN A
Sbjct: 2   KIPPAEFPTTSSSSALESPNPA 23


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 765 KLPEKKIPXTXAKATILSPNVA 700
           K+P  + P T + + + SPN A
Sbjct: 2   KIPPAEFPTTSSSSALESPNPA 23


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,459
Number of Sequences: 336
Number of extensions: 3999
Number of successful extensions: 22
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22206566
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)