Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_N24
         (813 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051936-1|AAK93360.1|  393|Drosophila melanogaster LD41588p pro...   324   7e-89
AE013599-1375|AAF58599.2|  393|Drosophila melanogaster CG8975-PA...   324   7e-89
U09370-1|AAA56996.1|  214|Drosophila melanogaster ribonucleoside...   166   3e-41
AY089653-1|AAL90391.1|  376|Drosophila melanogaster RH12051p pro...    33   0.35 
AY060911-1|AAL28459.1|  376|Drosophila melanogaster GM05661p pro...    33   0.35 
AE014296-2614|AAF49552.1|  376|Drosophila melanogaster CG5904-PA...    33   0.35 
BT022295-1|AAY54711.1|  222|Drosophila melanogaster IP08207p pro...    31   1.4  
AM086024-1|CAJ30424.1|  222|Drosophila melanogaster globin 2 pro...    31   1.4  

>AY051936-1|AAK93360.1|  393|Drosophila melanogaster LD41588p
           protein.
          Length = 393

 Score =  324 bits (797), Expect = 7e-89
 Identities = 149/198 (75%), Positives = 163/198 (82%)
 Frame = +2

Query: 218 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 397
           ++K+   FDP  EPLLRENPRRFVIFPIQY DIWQMYKKAEASFWTVEEVDLSKDL+DW 
Sbjct: 62  MEKSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 398 TLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYS 577
            LKD ERHFI HVLAFFAASDGIVNENLVERFSQEVQ+TEARCFYGFQIAMENVHSEMYS
Sbjct: 122 RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYS 181

Query: 578 LLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXX 757
           +LIDTYIRDP +R++LFNA+ET+P VK+KADWAL WI+SK+A FGER             
Sbjct: 182 VLIDTYIRDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFS 241

Query: 758 XXXXXXXWLXKRGLMPGL 811
                  WL KRGLMPGL
Sbjct: 242 GSFASIFWLKKRGLMPGL 259


>AE013599-1375|AAF58599.2|  393|Drosophila melanogaster CG8975-PA
           protein.
          Length = 393

 Score =  324 bits (797), Expect = 7e-89
 Identities = 149/198 (75%), Positives = 163/198 (82%)
 Frame = +2

Query: 218 LDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWE 397
           ++K+   FDP  EPLLRENPRRFVIFPIQY DIWQMYKKAEASFWTVEEVDLSKDL+DW 
Sbjct: 62  MEKSVTPFDPSLEPLLRENPRRFVIFPIQYHDIWQMYKKAEASFWTVEEVDLSKDLTDWH 121

Query: 398 TLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYS 577
            LKD ERHFI HVLAFFAASDGIVNENLVERFSQEVQ+TEARCFYGFQIAMENVHSEMYS
Sbjct: 122 RLKDDERHFISHVLAFFAASDGIVNENLVERFSQEVQITEARCFYGFQIAMENVHSEMYS 181

Query: 578 LLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXX 757
           +LIDTYIRDP +R++LFNA+ET+P VK+KADWAL WI+SK+A FGER             
Sbjct: 182 VLIDTYIRDPHQREYLFNAIETMPAVKRKADWALSWISSKSANFGERIIAFAAVEGIFFS 241

Query: 758 XXXXXXXWLXKRGLMPGL 811
                  WL KRGLMPGL
Sbjct: 242 GSFASIFWLKKRGLMPGL 259


>U09370-1|AAA56996.1|  214|Drosophila melanogaster
           ribonucleoside-diphosphate reductasesmall subunit
           protein.
          Length = 214

 Score =  166 bits (404), Expect = 3e-41
 Identities = 76/111 (68%), Positives = 86/111 (77%)
 Frame = +2

Query: 479 LVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVK 658
           LVERFSQEVQ+TEARCFYGFQIAMENVHSEMYS+LIDTYIRDP +R++LFNA+ET+P VK
Sbjct: 1   LVERFSQEVQITEARCFYGFQIAMENVHSEMYSVLIDTYIRDPHQREYLFNAIETMPAVK 60

Query: 659 KKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLXKRGLMPGL 811
           +KADWAL WI+SK+A FGER                    WL KRGLMPGL
Sbjct: 61  RKADWALSWISSKSANFGERIIAFAAVEGIFFSGSFASIFWLKKRGLMPGL 111


>AY089653-1|AAL90391.1|  376|Drosophila melanogaster RH12051p
           protein.
          Length = 376

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 23/95 (24%), Positives = 43/95 (45%)
 Frame = +2

Query: 152 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 331
           T+ P+ N +L+T +     E+ L  +    +  ++ +L  + ++   FPI     W+   
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298

Query: 332 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 436
             + S    E + L + L DW   K   RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329


>AY060911-1|AAL28459.1|  376|Drosophila melanogaster GM05661p
           protein.
          Length = 376

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 23/95 (24%), Positives = 43/95 (45%)
 Frame = +2

Query: 152 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 331
           T+ P+ N +L+T +     E+ L  +    +  ++ +L  + ++   FPI     W+   
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298

Query: 332 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 436
             + S    E + L + L DW   K   RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329


>AE014296-2614|AAF49552.1|  376|Drosophila melanogaster CG5904-PA
           protein.
          Length = 376

 Score = 33.5 bits (73), Expect = 0.35
 Identities = 23/95 (24%), Positives = 43/95 (45%)
 Frame = +2

Query: 152 TKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYK 331
           T+ P+ N +L+T +     E+ L  +    +  ++ +L  + ++   FPI     W+   
Sbjct: 239 TQLPISNDILSTWSQLSERELSLQASHPPANYFEQMVLWTDQKKVWRFPINNEQDWEDEH 298

Query: 332 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 436
             + S    E + L + L DW   K   RHF++ V
Sbjct: 299 NVDFS----EHIFLEQHLEDWCPSKGPIRHFMELV 329


>BT022295-1|AAY54711.1|  222|Drosophila melanogaster IP08207p
           protein.
          Length = 222

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 30/128 (23%), Positives = 55/128 (42%)
 Frame = +2

Query: 200 LTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSK 379
           LT    + +N +     ++   R N   F ++P   PD    YK  E  F  VE+  L  
Sbjct: 7   LTHISRISQNNQSDGSDEDKFRRAN---FPVYPKPLPDRDLSYKADENEFTMVEKASLR- 62

Query: 380 DLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENV 559
             + W  ++  +R F K     F       NE+L+  F ++ ++  ++  +G  +AM  +
Sbjct: 63  --NAWRLIEPFQRRFGKENFYSFLTR----NEDLINFFRKDGKINLSK-LHGHAMAMMKL 115

Query: 560 HSEMYSLL 583
            S++   L
Sbjct: 116 MSKLVQTL 123


>AM086024-1|CAJ30424.1|  222|Drosophila melanogaster globin 2
           protein.
          Length = 222

 Score = 31.5 bits (68), Expect = 1.4
 Identities = 30/128 (23%), Positives = 55/128 (42%)
 Frame = +2

Query: 200 LTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSK 379
           LT    + +N +     ++   R N   F ++P   PD    YK  E  F  VE+  L  
Sbjct: 7   LTHISRISQNNQSDGSDEDKFRRAN---FPVYPKPLPDRDLSYKADENEFTMVEKASLR- 62

Query: 380 DLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENV 559
             + W  ++  +R F K     F       NE+L+  F ++ ++  ++  +G  +AM  +
Sbjct: 63  --NAWRLIEPFQRRFGKENFYSFLTR----NEDLINFFRKDGKINLSK-LHGHAMAMMKL 115

Query: 560 HSEMYSLL 583
            S++   L
Sbjct: 116 MSKLVQTL 123


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,154,331
Number of Sequences: 53049
Number of extensions: 696511
Number of successful extensions: 2226
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2115
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2223
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)