Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_N24
(813 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35637-2|CAA84688.1| 381|Caenorhabditis elegans Hypothetical pr... 253 1e-67
U51997-5|AAG24065.1| 668|Caenorhabditis elegans Hypothetical pr... 92 4e-19
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ... 32 0.56
AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical ... 30 1.7
AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical ... 30 1.7
AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical ... 30 1.7
Z82069-3|CAB04908.1| 129|Caenorhabditis elegans Hypothetical pr... 29 4.0
AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling pr... 29 4.0
AF099000-2|AAK71875.1| 337|Caenorhabditis elegans Serpentine re... 28 6.9
U61956-5|AAB03178.2| 286|Caenorhabditis elegans Serpentine rece... 28 9.1
>Z35637-2|CAA84688.1| 381|Caenorhabditis elegans Hypothetical
protein C03C10.3 protein.
Length = 381
Score = 253 bits (620), Expect = 1e-67
Identities = 125/245 (51%), Positives = 162/245 (66%), Gaps = 3/245 (1%)
Frame = +2
Query: 86 TMAPTVDKENLHSGI--NGENRVQTKSPMKNSVLATKNDNLT-EEMDLDKNFEEFDPQKE 256
T V+KEN + + + N+++ + ++ + + + EE + + E D E
Sbjct: 4 TEIQNVEKENAGASVPKHSSNKLKLEKELEKLEIVDQTKAASAEETNNESEVNELDAD-E 62
Query: 257 PLLRENPRRFVIFPIQYPDIWQMYKKAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHV 436
P+L++ RFVIFP+++ DIW YKKA ASFWTVEEVDL KD++DWE + E++FI +
Sbjct: 63 PMLQDLDNRFVIFPLKHHDIWNFYKKAVASFWTVEEVDLGKDMNDWEKMNGDEQYFISRI 122
Query: 437 LAFFAASDGIVNENLVERFSQEVQVTEARCFYGFQIAMENVHSEMYSLLIDTYIRDPKER 616
LAFFAASDGIVNENL ERFS EVQV+EAR FYGFQIA+EN+HSEMYS LI+TYIRD ER
Sbjct: 123 LAFFAASDGIVNENLCERFSNEVQVSEARFFYGFQIAIENIHSEMYSKLIETYIRDETER 182
Query: 617 DFLFNAVETLPCVKKKADWALQWIASKTATFGERXXXXXXXXXXXXXXXXXXXXWLXKRG 796
+ LFNAV+ +KKKADWAL+WI+ K A+F ER WL KRG
Sbjct: 183 NTLFNAVDEFEFIKKKADWALRWISDKKASFAERLIAFAAVEGIFFSGSFASIFWLKKRG 242
Query: 797 LMPGL 811
LMPGL
Sbjct: 243 LMPGL 247
>U51997-5|AAG24065.1| 668|Caenorhabditis elegans Hypothetical
protein F19G12.2 protein.
Length = 668
Score = 92.3 bits (219), Expect = 4e-19
Identities = 42/90 (46%), Positives = 53/90 (58%)
Frame = +2
Query: 542 IAMENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQWIASKTATFGERX 721
IA+EN+HSEMY+ L++ YIRD ER+ LFNA+ T +K KADW L+WI+ A F ER
Sbjct: 445 IAVENIHSEMYAKLLEAYIRDDAERNILFNAITTFKFIKAKADWCLRWISDHNAPFSERL 504
Query: 722 XXXXXXXXXXXXXXXXXXXWLXKRGLMPGL 811
WL KRGL+PGL
Sbjct: 505 AAFAAVEGIFFSSSFAAIFWLKKRGLLPGL 534
>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
protein F55F10.1 protein.
Length = 4368
Score = 31.9 bits (69), Expect = 0.56
Identities = 22/86 (25%), Positives = 39/86 (45%)
Frame = +2
Query: 155 KSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQMYKK 334
K+ K+ V TK + +EMDL++ F + Q + ++N ++ P Y +I KK
Sbjct: 2693 KAEQKDFVYRTKTEEEKDEMDLEEFFANHE-QDHQVQKKNRKKCSKNPSNYANILMKIKK 2751
Query: 335 AEASFWTVEEVDLSKDLSDWETLKDS 412
+ + D+S L E + S
Sbjct: 2752 PTFLIQVLPDCDVSMLLESVERKRSS 2777
>AF003143-4|AAO61427.1| 247|Caenorhabditis elegans Hypothetical
protein C53H9.2c protein.
Length = 247
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +2
Query: 143 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 322
RV KS + ++ +N L DLD +E DP K+ LL N + ++ P Q W+
Sbjct: 7 RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 64
Query: 323 MYKKAE---ASFWT-VEEV 367
Y + E FW+ ++EV
Sbjct: 65 EYFEKENIKVIFWSAIDEV 83
>AF003143-3|AAL65781.1| 385|Caenorhabditis elegans Hypothetical
protein C53H9.2b protein.
Length = 385
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +2
Query: 143 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 322
RV KS + ++ +N L DLD +E DP K+ LL N + ++ P Q W+
Sbjct: 7 RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 64
Query: 323 MYKKAE---ASFWT-VEEV 367
Y + E FW+ ++EV
Sbjct: 65 EYFEKENIKVIFWSAIDEV 83
>AF003143-2|AAK68267.2| 554|Caenorhabditis elegans Hypothetical
protein C53H9.2a protein.
Length = 554
Score = 30.3 bits (65), Expect = 1.7
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +2
Query: 143 RVQTKSPMKNSVLATKNDNLTEEMDLDKNFEEFDPQKEPLLRENPRRFVIFPIQYPDIWQ 322
RV KS + ++ +N L DLD +E DP K+ LL N + ++ P Q W+
Sbjct: 176 RVVEKSDIIVQIVDARNPLLFRSKDLDDYVKEVDPAKQILLLVN-KADLLKPEQQAS-WR 233
Query: 323 MYKKAE---ASFWT-VEEV 367
Y + E FW+ ++EV
Sbjct: 234 EYFEKENIKVIFWSAIDEV 252
>Z82069-3|CAB04908.1| 129|Caenorhabditis elegans Hypothetical
protein W04A8.4 protein.
Length = 129
Score = 29.1 bits (62), Expect = 4.0
Identities = 22/82 (26%), Positives = 38/82 (46%)
Frame = +2
Query: 332 KAEASFWTVEEVDLSKDLSDWETLKDSERHFIKHVLAFFAASDGIVNENLVERFSQEVQV 511
KAEA++WT ++ + +SDW + H L +A D IV ++++ + +
Sbjct: 56 KAEATYWTGLDLHKGETMSDW-----TNTHLRGDQLR-YAIMDTIVMHLIIKQRLRNIHK 109
Query: 512 TEARCFYGFQIAMENVHSEMYS 577
+ R FQ EN H Y+
Sbjct: 110 NDPRL---FQYVFENGHPLPYN 128
>AF003384-5|AAB54239.2| 324|Caenorhabditis elegans Uncoupling
protein (mitochondrialsubstrate carrier) protein 4
protein.
Length = 324
Score = 29.1 bits (62), Expect = 4.0
Identities = 14/48 (29%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 551 ENVHSEMYSLLIDTYIRDPKERDFLFNAVETLPCVKKKADWALQ-WIA 691
+N H ++Y ++D YI+ K F LP + A W+L W++
Sbjct: 264 KNTHVDLYKGVVDCYIKIIKNEGFFSLYKGFLPSYIRMAPWSLTFWVS 311
>AF099000-2|AAK71875.1| 337|Caenorhabditis elegans Serpentine
receptor, class h protein128 protein.
Length = 337
Score = 28.3 bits (60), Expect = 6.9
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 575 SLLIDTYIRDPKERDFLFNAVETLPCVKKK 664
+ L+ YI P +RD +ET+PC+ K
Sbjct: 151 AFLVPIYILHPGQRDIQKYTIETIPCLPPK 180
>U61956-5|AAB03178.2| 286|Caenorhabditis elegans Serpentine
receptor, class x protein20 protein.
Length = 286
Score = 27.9 bits (59), Expect = 9.1
Identities = 16/55 (29%), Positives = 30/55 (54%)
Frame = -3
Query: 331 LVHLPYIGVLNREDDKAPRVLTQQRFLLWVELFEIFIEVHFLSQIVIFRSQYTIF 167
L+ L ++G L D K P L++ L+ + +FE+ +++F++ S Y IF
Sbjct: 55 LLFLVFVGPLQLTDLKLPYELSRFVGLISMIIFEVSAQLNFINSFNRVFSVYVIF 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,872,715
Number of Sequences: 27780
Number of extensions: 371810
Number of successful extensions: 1077
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1075
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1998381620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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