Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P16_F_N24
         (813 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    26   0.48 
AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...    25   1.1  
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...    25   1.1  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   4.4  

>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 25.8 bits (54), Expect = 0.48
 Identities = 14/30 (46%), Positives = 18/30 (60%)
 Frame = +2

Query: 293 FPIQYPDIWQMYKKAEASFWTVEEVDLSKD 382
           FP Q P  W++ K AE + + V E DLS D
Sbjct: 217 FPYQPPFAWKILKAAEEAGFGVSE-DLSGD 245


>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 542 IAMENVHSEMYSLLIDTYIRDPKERDFL 625
           I+ +    + Y  +ID ++R PKE+ FL
Sbjct: 43  ISKQISEEQRYKGMIDCFVRIPKEQGFL 70


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +2

Query: 542 IAMENVHSEMYSLLIDTYIRDPKERDFL 625
           I+ +    + Y  +ID ++R PKE+ FL
Sbjct: 43  ISKQISEEQRYKGMIDCFVRIPKEQGFL 70


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 22.6 bits (46), Expect = 4.4
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +2

Query: 344 SFWTVEEVDLSKDL 385
           +FWT  +VDLS+ L
Sbjct: 450 TFWTKSDVDLSRGL 463


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 212,706
Number of Sequences: 438
Number of extensions: 4371
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25853301
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)