Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_N23
(758 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 25 1.0
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 25 1.0
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 25 1.0
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 24 1.3
DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex det... 24 1.8
DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex det... 24 1.8
DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex det... 23 3.1
DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex det... 23 3.1
DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex det... 23 3.1
DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex det... 23 3.1
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 23 3.1
EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein. 23 4.1
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 4.1
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 22 5.4
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 22 5.4
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 22 5.4
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 22 5.4
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 22 7.2
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 22 7.2
EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein. 21 9.5
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 21 9.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 21 9.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 21 9.5
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +2
Query: 17 WSIGKMAPARSALGFLNSXTFNSLLTNT---IPKTTY 118
W PAR ALG T +L+++T +PK +Y
Sbjct: 243 WLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISY 279
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +2
Query: 17 WSIGKMAPARSALGFLNSXTFNSLLTNT---IPKTTY 118
W PAR ALG T +L+++T +PK +Y
Sbjct: 243 WLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISY 279
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 24.6 bits (51), Expect = 1.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +2
Query: 17 WSIGKMAPARSALGFLNSXTFNSLLTNT---IPKTTY 118
W PAR ALG T +L+++T +PK +Y
Sbjct: 182 WLNRNATPARVALGVTTVLTMTTLMSSTNAALPKISY 218
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 24.2 bits (50), Expect = 1.3
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = +2
Query: 209 HRHIHTTNNLYNRADYYKVLGVSKNASAKDIKKAYYQL 322
++ IH NN YN +Y N + + KK YY +
Sbjct: 320 NKTIHNNNN-YNNNNYNNNYNNYNNNNYNNYKKLYYNI 356
>DQ325089-1|ABD14103.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/42 (23%), Positives = 24/42 (57%)
Frame = +2
Query: 155 VGSHAISDTSFKTYNFPKHRHIHTTNNLYNRADYYKVLGVSK 280
+ ++ I + ++K YN+ + + NN YN+ YY ++ + +
Sbjct: 84 LSNNTIHNNNYK-YNYNNNNY---NNNNYNKKLYYNIINIEQ 121
>DQ325088-1|ABD14102.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 23.8 bits (49), Expect = 1.8
Identities = 10/42 (23%), Positives = 24/42 (57%)
Frame = +2
Query: 155 VGSHAISDTSFKTYNFPKHRHIHTTNNLYNRADYYKVLGVSK 280
+ ++ I + ++K YN+ + + NN YN+ YY ++ + +
Sbjct: 84 LSNNTIHNNNYK-YNYNNNNY---NNNNYNKKLYYNIINIEQ 121
>DQ325109-1|ABD14123.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 209 HRHIHTTNNLYNRADYYKV 265
++ IH NN Y + YY +
Sbjct: 87 NKTIHNNNNNYKKLQYYNI 105
>DQ325108-1|ABD14122.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 209 HRHIHTTNNLYNRADYYKV 265
++ IH NN Y + YY +
Sbjct: 87 NKTIHNNNNNYKKLQYYNI 105
>DQ325107-1|ABD14121.1| 176|Apis mellifera complementary sex
determiner protein.
Length = 176
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 209 HRHIHTTNNLYNRADYYKV 265
++ IH NN Y + YY +
Sbjct: 87 NKTIHNNNNNYKKLQYYNI 105
>DQ325106-1|ABD14120.1| 177|Apis mellifera complementary sex
determiner protein.
Length = 177
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 209 HRHIHTTNNLYNRADYYKV 265
++ IH NN Y + YY +
Sbjct: 87 NKTIHNNNNNYKKLQYYNI 105
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 23.0 bits (47), Expect = 3.1
Identities = 7/19 (36%), Positives = 11/19 (57%)
Frame = +2
Query: 209 HRHIHTTNNLYNRADYYKV 265
++ IH NN Y + YY +
Sbjct: 320 NKTIHNNNNNYKKLQYYNI 338
>EF589162-1|ABQ84439.1| 686|Apis mellifera hexamerin 70c protein.
Length = 686
Score = 22.6 bits (46), Expect = 4.1
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +2
Query: 137 NNCERFVGSHAISDTSFKTYNFPKHRHIHTTNNLYNRADYY 259
NN E ++ + S + + YN P+++ + ++ A YY
Sbjct: 195 NNIETYIVNTNYSSKNMREYNDPEYKLDYFMEDVELNAYYY 235
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 4.1
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = +2
Query: 194 YNFPKHRHIHTTNNLYNRADYYKV 265
YN+ + + + N YN+ YY +
Sbjct: 89 YNYSNYNNYNNNYNNYNKKLYYNI 112
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/28 (25%), Positives = 15/28 (53%)
Frame = +2
Query: 182 SFKTYNFPKHRHIHTTNNLYNRADYYKV 265
++K N+ + + + NN Y + YY +
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKKLQYYNI 115
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/28 (25%), Positives = 15/28 (53%)
Frame = +2
Query: 182 SFKTYNFPKHRHIHTTNNLYNRADYYKV 265
++K N+ + + + NN Y + YY +
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKKLQYYNI 115
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/28 (25%), Positives = 15/28 (53%)
Frame = +2
Query: 182 SFKTYNFPKHRHIHTTNNLYNRADYYKV 265
++K N+ + + + NN Y + YY +
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKKLQYYNI 115
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 22.2 bits (45), Expect = 5.4
Identities = 7/28 (25%), Positives = 15/28 (53%)
Frame = +2
Query: 182 SFKTYNFPKHRHIHTTNNLYNRADYYKV 265
++K N+ + + + NN Y + YY +
Sbjct: 88 NYKYSNYNNYNNNNYNNNNYKKLQYYNI 115
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 21.8 bits (44), Expect = 7.2
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 369 RKSFKKYLKPMRYYQMKINVNNMTHMAQRPNKWAWVAP 482
RK ++ ++ ++ Q+++NV TH+ Q +K AP
Sbjct: 139 RKKLEQAIQQLQE-QLQLNVIQQTHLLQTADKKKASAP 175
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.8 bits (44), Expect = 7.2
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 402 RYYQMKINVNNMTHMAQRPNKWAWVAP 482
+++QM IN N + + + + WV P
Sbjct: 128 KWFQMSINNTNNNNTNKYKDYYIWVDP 154
>EF625898-1|ABR45905.1| 686|Apis mellifera hexamerin protein.
Length = 686
Score = 21.4 bits (43), Expect = 9.5
Identities = 10/41 (24%), Positives = 20/41 (48%)
Frame = +2
Query: 137 NNCERFVGSHAISDTSFKTYNFPKHRHIHTTNNLYNRADYY 259
NN E ++ + S + YN P+++ + ++ A YY
Sbjct: 195 NNIETYIVNTNYSSKYMREYNDPEYKLDYFMEDVELNAYYY 235
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 21.4 bits (43), Expect = 9.5
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 537 KNCLGRFLEMLASRVILLVIL 599
++C+GR ML +++L IL
Sbjct: 486 RSCVGRKYAMLKLKIVLSTIL 506
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/33 (27%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 342 TPINRTQKLRKSFK-KYLKPMRYYQMKINVNNM 437
T ++ + K+++ F L+P YQ+K+ +N+
Sbjct: 1545 TLVSNSVKMQRRFVVTNLQPSSVYQLKVETHNV 1577
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 21.4 bits (43), Expect = 9.5
Identities = 9/33 (27%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +3
Query: 342 TPINRTQKLRKSFK-KYLKPMRYYQMKINVNNM 437
T ++ + K+++ F L+P YQ+K+ +N+
Sbjct: 1541 TLVSNSVKMQRRFVVTNLQPSSVYQLKVETHNV 1573
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 193,404
Number of Sequences: 438
Number of extensions: 3953
Number of successful extensions: 34
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23875740
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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