Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P16_F_N18
(659 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein. 353 3e-99
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc... 25 2.1
DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein. 24 4.9
DQ080895-1|AAY89541.1| 120|Anopheles gambiae olfactory receptor... 23 6.5
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript... 23 6.5
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 23 8.5
AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger transc... 23 8.5
>L36067-1|AAA29362.1| 229|Anopheles gambiae polyubiquitin protein.
Length = 229
Score = 353 bits (868), Expect = 3e-99
Identities = 176/180 (97%), Positives = 176/180 (97%)
Frame = +1
Query: 118 MQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 297
MQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 298 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGIPPDQQRLI 477
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGIPPDQQRLI
Sbjct: 61 IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLI 120
Query: 478 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIXNVKA 657
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTI NVKA
Sbjct: 121 FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 180
Score = 346 bits (850), Expect = 4e-97
Identities = 171/176 (97%), Positives = 171/176 (97%)
Frame = +1
Query: 46 GAPXSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEASDTIENVKAKIQDKEGI 225
G SDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE SDTIENVKAKIQDKEGI
Sbjct: 53 GRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI 112
Query: 226 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEAS 405
PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE S
Sbjct: 113 PPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPS 172
Query: 406 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 573
DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG
Sbjct: 173 DTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 228
Score = 32.3 bits (70), Expect = 0.014
Identities = 16/26 (61%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +3
Query: 15 LIFAGKQLEDGRTL--XRLQHSKRIH 86
LIFAGKQLEDGRTL +Q +H
Sbjct: 43 LIFAGKQLEDGRTLSDYNIQKESTLH 68
Score = 32.3 bits (70), Expect = 0.014
Identities = 16/26 (61%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +3
Query: 15 LIFAGKQLEDGRTL--XRLQHSKRIH 86
LIFAGKQLEDGRTL +Q +H
Sbjct: 119 LIFAGKQLEDGRTLSDYNIQKESTLH 144
Score = 32.3 bits (70), Expect = 0.014
Identities = 16/26 (61%), Positives = 18/26 (69%), Gaps = 2/26 (7%)
Frame = +3
Query: 15 LIFAGKQLEDGRTL--XRLQHSKRIH 86
LIFAGKQLEDGRTL +Q +H
Sbjct: 195 LIFAGKQLEDGRTLSDYNIQKESTLH 220
>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
channel alpha1 subunit protein.
Length = 1893
Score = 25.0 bits (52), Expect = 2.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 537 FFLNVVV**GASVFQLLACKDETLLIRRNSF 445
FF+ V+ G VF +A DET + R N+F
Sbjct: 1320 FFIYAVI--GMQVFGKIAMDDETSIHRNNNF 1348
Score = 25.0 bits (52), Expect = 2.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -3
Query: 309 FFLNVVV*QGASVFQLLASKDETLLIRRNSF 217
FF+ V+ G VF +A DET + R N+F
Sbjct: 1320 FFIYAVI--GMQVFGKIAMDDETSIHRNNNF 1348
>DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein.
Length = 847
Score = 23.8 bits (49), Expect = 4.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -3
Query: 417 LNCVRSFYFQSDGLSGQSFH 358
+ CVR+ Y + +SG FH
Sbjct: 267 VRCVRTIYDEHQRISGNGFH 286
>DQ080895-1|AAY89541.1| 120|Anopheles gambiae olfactory receptor 38
protein.
Length = 120
Score = 23.4 bits (48), Expect = 6.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 578 CMPPRRRSTRWSV 540
C PP RR+ RW V
Sbjct: 34 CWPPDRRTRRWYV 46
Score = 23.4 bits (48), Expect = 6.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 350 CMPPRRRSTRWSV 312
C PP RR+ RW V
Sbjct: 34 CWPPDRRTRRWYV 46
Score = 23.4 bits (48), Expect = 6.5
Identities = 8/13 (61%), Positives = 9/13 (69%)
Frame = -1
Query: 122 CMPPRRRSTRWSV 84
C PP RR+ RW V
Sbjct: 34 CWPPDRRTRRWYV 46
>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
protein.
Length = 1009
Score = 23.4 bits (48), Expect = 6.5
Identities = 7/22 (31%), Positives = 17/22 (77%)
Frame = -3
Query: 612 DGLSSQSFHEDLHASTKTQYKM 547
D L+ ++FH DL+++ + ++K+
Sbjct: 292 DRLAQRAFHTDLYSTFRDEFKV 313
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 23.0 bits (47), Expect = 8.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 214 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 336
K P Q R IF G+ +++ + +Q++ HL++ L
Sbjct: 588 KREFPDLQNRTIFTGRFVKELYDVRSGCVQEQDGTHLLMNL 628
Score = 23.0 bits (47), Expect = 8.5
Identities = 11/41 (26%), Positives = 21/41 (51%)
Frame = +1
Query: 442 KEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRL 564
K P Q R IF G+ +++ + +Q++ HL++ L
Sbjct: 588 KREFPDLQNRTIFTGRFVKELYDVRSGCVQEQDGTHLLMNL 628
>AF395080-1|AAK97462.1| 537|Anopheles gambiae zinc finger
transcription factor pannier protein.
Length = 537
Score = 23.0 bits (47), Expect = 8.5
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -3
Query: 651 HVXNCVRSFYF*SDGLSSQSFHEDLH 574
++ NC++S YF S G SS H H
Sbjct: 455 YMNNCLQSGYF-SGGFSSLHSHHSPH 479
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.314 0.133 0.357
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 738,787
Number of Sequences: 2352
Number of extensions: 15390
Number of successful extensions: 35
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65650335
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
- SilkBase 1999-2023 -